Power Management Optimization Platform for High Performance Computing and Data Centers
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32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗
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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.
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Acoustic Data Analytics For Predictive Technologies
The software utilizes frequency, amplitude, and phase features from sensor signals (either raw or processed) that are extracted using recursive frequency analysis, enabling (1) understanding of reactor operations under different operating conditions, (2) identifying of quiescent frequency ranges for sensor development, (3) system controls (4) predictive analytics, (5) structural health monitoring, and (6) loose part monitoring.
Smith, JamesA.↗
Agilent AgileBioFoundry CRADA (Final Report)
The mission of this CRADA with Agilent was to couple powerful MS platforms (QQQ, IM-QTOF-MS) with Agilent’s novel Ultra-High-Performance Liquid Chromatography (UHPLC) fast metabolomic workflows and perform ABF Machine Learning (ML) to generated datasets. Agilent transferred UHPLC methods to PNNL and LBNL and methods were implemented and demonstrated in both labs, achieving total acquisition times of < 10 min. Metabolites analyzed using Agilent’s shared methods included metabolites from central carbon metabolism, common across hosts, and metabolites unique to engineered strains. Standards were acquired in an UHPLC-Drift Tube Ion Mobility Mass Spectrometer (DTIMS) system for the first time within the context of ABF and methods were optimized based on Agilent’s protocols. Samples from ABF hosts Pseudomonas putida, Aspergillus pseudoterreus, Aspergillus niger and Rhodosporidium toruloides were analyzed using the UHPLC-DTIMS platform for a total of 276 runs. A data analysis workflow compatible with the Experimental Data Depot (EDD) and completely shareable was developed for the acquired UHPLC-DTIMS data. Samples were analyzed using a Data Independent Acquisition Approach (DIA), which for most of the standards provided more transitions therefore increasing detection confidence. Using the data acquired by PNNL, LBNL, and Agilent’s specifications from previous ML projects, SNL applied an ensemble ML strategy to pick the best performing model for automated LC-method selection. Finally, with the contribution of the participant labs and Agilent, SNL developed an Automated Method Selection (AMS) software tool to predict the best liquid chromatography method for analysis of any new molecules of interest. Samples with novel pathways and new metabolite targets of interest are generated at a high pace in the ABF. Therefore, our accomplishment in this CRADA improved the efficiency and accuracy of strain testing by developing and implementing fast analytical methods, robust processing tools, and software for predicting the best methods for UHPLC analysis.
97 MATHEMATICS AND COMPUTING↗
Analytic Nuclear Gradients for Complete Active Space Linearized Pair-Density Functional Theory
Accurately modeling photochemical reactions is difficult due to the presence of conical intersections and locally avoided crossings, as well as the inherently multiconfigurational character of excited states. As such, one needs a multistate method that incorporates state interaction in order to accurately model the potential energy surface at all nuclear coordinates. The recently developed linearized pair-density functional theory (L-PDFT) is a multistate extension of multiconfiguration PDFT, and it has been shown to be a cost-effective post-MCSCF method (as compared to more traditional and expensive multireference many-body perturbation methods or multireference configuration interaction methods) that can accurately model potential energy surfaces in regions of strong nuclear–electronic coupling in addition to accurately predicting Franck–Condon vertical excitations. Here, in this paper, we report the derivation of analytic gradients for L-PDFT and their implementation in the PySCF-forge software, and we illustrate the utility of these gradients for predicting ground- and excited-state equilibrium geometries and adiabatic excitation energies for formaldehyde, s-trans-butadiene, phenol, and cytosine.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
nrelWattileExt (SkySpark Wattile Extension) [SWR-24-73]
The NREL Wattile extension, nrelWattileExt, provides an interface between SkySpark, an energy management and analytics software, and Wattile, an NREL-developed Python package for probabilistic prediction of building energy consumption. Wattile models predict discrete quantiles of the probability distribution of a target quantity (typically energy consumption) using the historical time series data from one or more predictors (typically weather data). Within SkySpark, predictions from Wattile models can be used for measurement & verification of building performance, detection of energy anomalies, and fault detection. Related to: https://github.com/NREL/Wattile
Frank, Stephen↗
CRADA Final Report: Weld Predictor App
Welding is an important manufacturing process used in a broad range of industries and market sectors, including automotive, aerospace, heavy manufacturing, medical, and defense. During welded fabrication, high localized heat input and subsequent rapid cooling result in the creation of residual stresses and distortion. These residual stresses can significantly affect the fatigue resistance, cracking behavior, and load-carrying capacity of welded structures during service. Further, additional fitting and tacking time is often required to fit distorted subassemblies together, resulting in non-value added cost. Using trial-and-error methods to determine which welding parameters, welding sequences, and fixture designs will most effectively reduce distortion is a time-consuming and expensive process. For complex structures with many welds, this approach can take several months. For this reason, efficient and accurate methods of mitigating distortion are in-demand across all industries where welding is used. Analytical and computational methods and commercial software tools have been developed to predict welding-induced residual stresses and distortion. Welding process parameters, fixtures, and tooling can be optimized to reduce the HAZ softening and minimize weld residual stress and distortion, improving performance and reducing design, fabrication and testing costs. However, weld modeling technology tools are currently accessible only to engineers and designers with a background in finite element analysis (FEA) who work with large manufacturers, research institutes, and universities with access to high-performance computing (HPC) resources. Small and medium enterprises (SMEs) in the US do not typically have the human and computational resources needed to adopt and utilize weld modeling technology. To allow an engineer with no background in FEA and SMEs to gain access to this important design tool, EWI and the Ohio Supercomputer Center (OSC) developed the online weld application software tool “WeldPredictor” ( https://eweldpredictor.ewi.org ). About 1400 users have tested this application. This project marked the beginning of development on the next version of WeldPredictor that addresses many outstanding features of the original, including 3D models, allow more material hardening laws, model material phase transformation, and uses open source finite element solvers to quickly solve problems (as opposed to expensive commercial tools).
42 ENGINEERING↗
FIER: Software for analytical modeling of delayed gamma-ray spectra
We report a new software package, the Fission Induced Electromagnetic Response (FIER) code, has been developed to analytically predict delayed γ-ray spectra following fission. FIER uses evaluated nuclear data and solutions to the Bateman equations to calculate the time-dependent populations of fission products and their decay daughters resulting from irradiation of a fissionable isotope. These populations are then used in the calculation of γ-ray emission rates to obtain the corresponding delayed γ-ray spectra. FIER output was compared to experimental data obtained by irradiation of a 235 U sample in the Godiva critical assembly. This investigation illuminated discrepancies in the input nuclear data libraries, showcasing the usefulness of FIER as a tool to address nuclear data deficiencies through comparison with experimental data. Finally, FIER provides traceability between γ-ray emissions and their contributing nuclear species, decay chains, and parent fission fragments, yielding a new capability for the nuclear science community.
73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
Attack Surface Analysis of the Digital Twins interface with Advanced Sensor and Instrumentation Interfaces: Cyber Threat Assessment and Attack Demonstration for Digital Twins in Advanced Reactor Architectures
A digital twin is a virtual representation of a physical system or object using real-time data that can predict and analyze how the system or object performs. This relatively new technology can be applied to the field of nuclear power generation, to aid in the design and development of new nuclear power plants and reduce operation costs using predictive maintenance and other data analytical methods. While there are already companies utilizing simulation software to train operators and technicians in the nuclear industry, some are now transitioning to utilizing their existing technology, software, and methods to develop digital twin solutions for the next generation of nuclear power plants, offering their services to utilities and government organizations around the world.
21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗
SAS4A/SASSYS-1 Lead Verification Test Suite
SAS4A/SASSYS-1 is a simulation tool used to perform deterministic analyses of anticipated events as well as design basis and beyond design basis accidents for advanced liquid-metal-cooled nuclear reactors. With its origin as SAS1A in the late 1960s, the SAS series of codes has been under continuous use and development for over forty-five years and represents a critical investment in safety analysis capabilities for the U.S. Department of Energy. Although SAS4A/SASSYS-1 was developed to support the analysis of any liquid-metal-cooled nuclear reactor, it has primarily been utilized to design and analyze Sodium Fast Reactors (SFRs). As a result, most of the verification basis for SAS4A/SASSYS-1 utilizes sodium as a coolant and geometry descriptions that are typical of a SFR facility. In this work, new verification problems are defined to extend the applicability of the SAS4A/SASSYS-1 verification basis into Lead Fast Reactor (LFR) design space. A review of the existing SAS4A/SASSYS-1 SFR verification test suite is performed to determine the number of test cases that are SFR specific. SFR specific test cases are replicated using lead as a coolant and system layouts that are representative of LFRs. This report provides definitions and reference solutions for seven new test cases that scope lead-specific features and capabilities of the software. For a verification test to be considered acceptable, comparisons of analytical solutions to SAS4A/SASSYS-1 predictions must produce negligible or justifiable errors. All LFR specific test cases are found to be acceptable.
22 GENERAL STUDIES OF NUCLEAR REACTORS↗
A program for automatically predicting supramolecular aggregates and its application to urea and porphin [A programme for the automated geometry prediction of supra-molecular aggregates and its application to the examples of urea and porphin]
Not only the molecular structure but also the presence or absence of aggregates determines many properties of organic materials. Theoretical investigation of such aggregates requires the prediction of a suitable set of diverse structures. Here, we present the open–source program EnergyScan for the unbiased prediction of geometrically diverse sets of small aggregates. Its bottom–up approach is complementary to existing ones by performing a detailed scan of an aggregate's potential energy surface, from which diverse local energy minima are selected. We crossvalidate this approach by predicting both literature–known and heretofore unreported geometries of the urea dimer. We also predict a diverse set of dimers of the less intensely studied case of porphin, which we investigate further using quantum chemistry. For several dimers, we find strong deviations from a reference absorption spectrum, which we explain using computed transition densities. Furthermore, this proof of principle clearly shows that EnergyScan successfully predicts aggregates exhibiting large structural and spectral diversity.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
Predictive Big Data Analytics: A Study of Parkinson’s Disease Using Large, Complex, Heterogeneous, Incongruent, Multi-Source and Incomplete Observations
Background A unique archive of Big Data on Parkinson’s Disease is collected, managed and disseminated by the Parkinson’s Progression Markers Initiative (PPMI). The integration of such complex and heterogeneous Big Data from multiple sources offers unparalleled opportunities to study the early stages of prevalent neurodegenerative processes, track their progression and quickly identify the efficacies of alternative treatments. Many previous human and animal studies have examined the relationship of Parkinson’s disease (PD) risk to trauma, genetics, environment, co-morbidities, or life style. The defining characteristics of Big Data–large size, incongruency, incompleteness, complexity, multiplicity of scales, and heterogeneity of information-generating sources–all pose challenges to the classical techniques for data management, processing, visualization and interpretation. We propose, implement, test and validate complementary model-based and model-free approaches for PD classification and prediction. To explore PD risk using Big Data methodology, we jointly processed complex PPMI imaging, genetics, clinical and demographic data. Methods and Findings Collective representation of the multi-source data facilitates the aggregation and harmonization of complex data elements. This enables joint modeling of the complete data, leading to the development of Big Data analytics, predictive synthesis, and statistical validation. Using heterogeneous PPMI data, we developed a comprehensive protocol for end-to-end data characterization, manipulation, processing, cleaning, analysis and validation. Specifically, we (i) introduce methods for rebalancing imbalanced cohorts, (ii) utilize a wide spectrum of classification methods to generate consistent and powerful phenotypic predictions, and (iii) generate reproducible machine-learning based classification that enables the reporting of model parameters and diagnostic forecasting based on new data. We evaluated several complementary model-based predictive approaches, which failed to generate accurate and reliable diagnostic predictions. However, the results of several machine-learning based classification methods indicated significant power to predict Parkinson’s disease in the PPMI subjects (consistent accuracy, sensitivity, and specificity exceeding 96%, confirmed using statistical n-fold cross-validation). Clinical (e.g., Unified Parkinson's Disease Rating Scale (UPDRS) scores), demographic (e.g., age), genetics (e.g., rs34637584, chr12), and derived neuroimaging biomarker (e.g., cerebellum shape index) data all contributed to the predictive analytics and diagnostic forecasting. Conclusions Model-free Big Data machine learning-based classification methods (e.g., adaptive boosting, support vector machines) can outperform model-based techniques in terms of predictive precision and reliability (e.g., forecasting patient diagnosis). We observed that statistical rebalancing of cohort sizes yields better discrimination of group differences, specifically for predictive analytics based on heterogeneous and incomplete PPMI data. UPDRS scores play a critical role in predicting diagnosis, which is expected based on the clinical definition of Parkinson’s disease. Even without longitudinal UPDRS data, however, the accuracy of model-free machine learning based classification is over 80%. The methods, software and protocols developed here are openly shared and can be employed to study other neurodegenerative disorders (e.g., Alzheimer’s, Huntington’s, amyotrophic lateral sclerosis), as well as for other predictive Big Data analytics applications.
Science & Technology - Other Topics↗
Computing Bottleneck Structures at Scale for High-Precision Network Performance Analysis
The Theory of Bottleneck Structures is a recently-developed framework for studying the performance of data networks. It describes how local perturbations in one part of the network propagate and interact with others. This framework is a powerful analytical tool that allows network operators to make accurate predictions about network behavior and thereby optimize performance. Previous work implemented a software package for bottleneck structure analysis, but applied it only to toy examples. In this work, we introduce the first software package capable of scaling bottleneck structure analysis to production-size networks. Here, we benchmark our system using logs from ESnet, the Department of Energy's high-performance data network that connects research institutions in the U.S. Using the previously published tool as a baseline, we demonstrate that our system achieves vastly improved performance, constructing the bottleneck structure graphs in 0.21 s and calculating link derivatives in 0.09 s on average. We also study the asymptotic complexity of our core algorithms, demonstrating good scaling properties and strong agreement with theoretical bounds. These results indicate that our new software package can maintain its fast performance when applied to even larger networks. They also show that our software is efficient enough to analyze rapidly changing networks in real time. Overall, we demonstrate the feasibility of applying bottleneck structure analysis to solve practical problems in large, real-world data networks.
benchmark↗
Accelerating Random Forest Classification on GPU and FPGA
Random Forests (RFs) are a commonly used machine learning method for classification and regression tasks spanning a variety of application domains, including bioinformatics, business analytics, and software optimization. While prior work has focused primarily on improving performance of the training of RFs, many applications, such as malware identification, cancer prediction, and banking fraud detection, require fast RF classification. In this work, we accelerate RF classification on GPU and FPGA. In order to provide efficient support for large datasets, we propose a hierarchical memory layout suitable to the GPU/FPGA memory hierarchy. We design three RF classification code variants based on that layout, and we investigate GPU- and FPGA-specific considerations for these kernels. Our experimental evaluation, performed on an Nvidia Xp GPU and on a Xilinx Alveo U250 FPGA accelerator card using publicly available datasets on the scale of millions of samples and tens of features, covers various aspects. First, we evaluate the performance benefits of our hierarchical data structure over the standard compressed sparse row (CSR) format. Second, we compare our GPU implementation with cuML, a machine learning library targeting Nvidia GPUs. Third, we explore the performance/accuracy tradeoff resulting from the use of different tree depths in the RF. Finally, we perform a comparative performance analysis of our GPU and FPGA implementations. Our evaluation shows that for high accuracy targets, our GPU implementation yields 5-9x speedup over CSR, and up to a 2x speedup over cuML.
FPGA, Xilinx FPGA, GPU, Random Forest classificati↗
Open-air Demolition: Validation of EPA Approved Alternative Method for Emission Estimation - 19397
Emissions from open-air demolition of US Department of Energy (DOE) facilities are regulated by the US Environmental Protection Agency (EPA) under 40 CFR 61 subpart H. This regulation requires that facilities estimate emissions using an EPA approved method from activities such as open-air demolition prior to commencing the activity. Should those emissions exceed certain thresholds, the facility may be required to obtain an Approval to Construct or Modify the facility and/or installed monitoring methods meeting methods acceptable to EPA. There are no EPA approved methods that are specific to open-air demolition methods. For this project the DOE and CH2M Hill BWXT elected to prepare an alternative method specific to open-air demolition. EPA conditionally approved the method but required validation of the method during the demolition of the Vitrification Facility at the West Valley Demonstration Project (WVDP) before use for open-air demolition at other WVDP structures. The validation method included detailed source characterization, close-in ambient samplers, and a comparison of measured results to predicted emissions using AERMOD (American Meteorological Society (AMS) and U.S. Environmental Protection Agency (EPA) Regulatory Model). The methods evaluated include hydraulic hammers, mechanical shears, load out of waste and handling of the debris piles. The validation method involved the collection and analysis of ambient air samples from air samplers located at strategic locations within the projected plume path of the demolition activities. The analytical results from the air samplers were then compared to ambient air concentrations predicted at the sampler locations with the EPA model AERMOD. The input to the AERMOD software is a source term developed weekly using the alternative method and material at risk disturbed during each week. To account for the building wake effects of the surrounding structures, virtual point sources were developed in the AERMOD model and placed at the locations of the demolition, debris piles, debris handling and load out areas. It was found that the factors used for hydraulic hammering were extremely conservative and that emissions from the debris pile were not only the primary emission source, but that the moisture content of the debris pile and the wind speed were critical factors that must be considered in future open-air demolition projects. Based on the results of the validation process, adjustments were made to the alternative method. The final validated alternative method provides an approach for estimating airborne emissions from open-air demolition methods and techniques. The method will be used in lieu of 40 CFR 61 Appendix D to estimate emissions from future open-air demolition projects at the WVDP. (authors)
12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗
Assessing the reliability of the NIST library during routine GC-MS analyses: Structure and spectral data corroboration for 5,5-diphenyl-1,3-dioxolan-4-one during a recent OPCW proficiency test
In the field of analytical chemistry, it is the nature of the available instrumentation that makes a specific technique uniquely suited for answering a specific challenge. Often times, instruments equipped with ultrasensitive array of detectors and state-of-the-art separation components have served to highlight their invaluable role in the field. Nonetheless, it is their ultimate ability to predict the structure of an unknown material on the basis of mass spectral data that exponentially magnifies their value. Their efficacy in achieving this prediction is largely based on the size of their internal mass spectral library that conveniently can be accessed by using the software. The library can thus exhaustively correlate an unknown compound's mass spectrum to known compounds in a database and provide the analytical chemist with a probable structure for the unknown analyte. During routine analysis, it is customary that after the appropriate collection of the compound's mass spectrum, the next step involves its comparison with a compound in the instrument's National Institute of Standards and Technology (NIST) library.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
Electrical Submersible Pumps: A System Modeling Approach for Power Quality Analysis With Variable Frequency Drives
This article proposes a high-level engineering guide to develop an integrated system model for power quality analysis in electrical submersible pump (ESP) applications with variable frequency drives (VFDs). Such analyses are troublesome in the industry due to the complexity of these systems. In this article, simple steps to perform system integration analyses of such arrangements, including torsional analysis, are developed. A simplified VFD-ESP model suitable for coupled electrical and mechanical analysis in steady state is proposed in all their configurations of practical interest. Such a model can be easily implemented in common simulation software, significantly reducing engineering efforts for implementation and analysis. The focus of the proposed model is the prediction of ESP failures that might result from a poor power quality caused by VFDs. Analytical expressions of different types of harmonics in these systems, as well as their accurate locations in the frequency domain, including their interharmonics and common-mode harmonics, are derived for this purpose. Further, the effectiveness of the proposed model is verified through offline and real-time hybrid simulation results. Finally, a comparison between simulation results obtained using the proposed model and measurements collected on a down-scale laboratory prototype is carried out to demonstrate the accuracy of the suggested modeling approach.
42 ENGINEERING↗
A Conceptual Framework for HPC Operational Data Analytics
This paper provides a broad framework for under- standing trends in Operational Data Analytics (ODA) for High- Performance Computing (HPC) facilities. The goal of ODA is to allow for the continuous monitoring, archiving, and analysis of near real-time performance data, providing immediately actionable information for multiple operational uses. In this work, we combine two models to provide a comprehensive HPC ODA framework: one is an evolutionary model of analytics capabilities that consists of four types, which are descriptive, diagnostic, predictive and prescriptive, while the other is a four- pillar model for energy-efficient HPC operations that covers facility, system hardware, system software, and applications. This new framework is then overlaid with a description of current development and production deployments of ODA within leading- edge HPC facilities. Finally, we perform a comprehensive survey of ODA works and classify them according to our framework, in order to demonstrate its effectiveness.
Netti, Alessio↗
A process to verify numerical models for seismic fluid-structure interaction in advanced reactor vessels
Seismic design and qualification of a liquid-filled advanced nuclear reactor will have to account for fluid-structure interaction (FSI). Interaction between the tank, internal components, and contained liquid will rely on analysis of numerical models that must be verified and validated. Here this study demonstrates a verification process for models of a base-supported cylindrical tank by comparing numerical predictions and analytical solutions. The numerical models are consistent with the assumptions made to derive analytical solutions, namely, either a rigid or a linear elastic tank, ideal fluid, and small-amplitude, unidirectional, horizontal inputs. One software platform is used to illustrate the process. Seismic FSI analysis is performed using the Arbitrary Lagrangian-Eulerian (ALE) and Incompressible Computational Fluid Dynamics (ICFD) solvers in LS-DYNA. Reported responses are those used for design, including hydrodynamic pressures on the tank wall, shear forces and moments at the tank base, and wave heights of the contained liquid. The accuracy of the numerical results is discussed. The numerical models are verified for calculating the pressures on the tank wall and reactions at its base. Accurate simulation of wave action is challenging for both solvers. Recommendations for modeling, code development, and steps for verification are provided. Although focused on reactor vessels and one software platform, the verification process described herein is broadly applicable to liquid-filled vessels and other finite element codes.
22 GENERAL STUDIES OF NUCLEAR REACTORS↗