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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 19 records

Microbial burden prediction model program

Model supplements biological surveys of spacecraft by simulating microbial burden accumulation process during periods when surveys are not taken. Important application of model is to predict microbial loading on spacecraft landing capsule immediately prior to terminal heat sterilization.

Meuser, R. F.↗

Stochastic robust mathematical programming model for power system optimization

We present a stochastic robust framework for two-stage power system optimization problems with uncertainty. The model optimizes the probabilistic expectation of different worst-case scenarios with different uncertainty sets. In addition, a case study of unit commitment shows the effectiveness of the proposed model and algorithms.

97 MATHEMATICS AND COMPUTING↗

Report of the 2014 Programming Models and Environments Summit

Programming models and environments play the essential roles in high performance computing of enabling the conception, design, implementation and execution of science and engineering application codes. Programmer productivity is strongly influenced by the effectiveness of our programming models and environments, as is software sustainability since our codes have lifespans measured in decades, so the advent of new computing architectures, increased concurrency, concerns for resilience, and the increasing demands for high-fidelity, multi-physics, multi-scale and data-intensive computations mean that we have new challenges to address as part of our fundamental R&D requirements. Fortunately, we also have new tools and environments that make design, prototyping and delivery of new programming models easier than ever. The combination of new and challenging requirements and new, powerful toolsets enables significant synergies for the next generation of programming models and environments R&D. This report presents the topics discussed and results from the 2014 DOE Office of Science Advanced Scientific Computing Research (ASCR) Programming Models & Environments Summit, and subsequent discussions among the summit participants and contributors to topics in this report.

97 MATHEMATICS AND COMPUTING↗

ECUT: Energy Conversion and Utilization Technologies program. Heterogeneous catalysis modeling program concept

Insufficient theoretical definition of heterogeneous catalysts is the major difficulty confronting industrial suppliers who seek catalyst systems which are more active, selective, and stable than those currently available. In contrast, progress was made in tailoring homogeneous catalysts to specific reactions because more is known about the reaction intermediates promoted and/or stabilized by these catalysts during the course of reaction. However, modeling heterogeneous catalysts on a microscopic scale requires compiling and verifying complex information on reaction intermediates and pathways. This can be achieved by adapting homogeneous catalyzed reaction intermediate species, applying theoretical quantum chemistry and computer technology, and developing a better understanding of heterogeneous catalyst system environments. Research in microscopic reaction modeling is now at a stage where computer modeling, supported by physical experimental verification, could provide information about the dynamics of the reactions that will lead to designing supported catalysts with improved selectivity and stability.

Voecks, G. E.↗

Consideration in selecting crops for the human-rated life support system: a Linear Programming model

A Linear Programming model has been constructed which aids in selecting appropriate crops for CELSS (Controlled Environment Life Support System) food production. A team of Controlled Environment Agriculture (CEA) faculty, staff, graduate students and invited experts representing more than a dozen disciplines, provided a wide range of expertise in developing the model and the crop production program. The model incorporates nutritional content and controlled-environment based production yields of carefully chosen crops into a framework where a crop mix can be constructed to suit the astronauts' needs. The crew's nutritional requirements can be adequately satisfied with only a few crops (assuming vitamin mineral supplements are provided) but this will not be satisfactory from a culinary standpoint. This model is flexible enough that taste and variety driven food choices can be built into the model.

NASA Center JSC↗

Programming Models in HPC

These are the slides for a presentation on programming models in HPC, at the Los Alamos National Laboratory's Parallel Computing Summer School. The following topics are covered: Flynn's Taxonomy of computer architectures; single instruction single data; single instruction multiple data; multiple instruction multiple data; address space organization; definition of Trinity (Intel Xeon-Phi is a MIMD architecture); single program multiple data; multiple program multiple data; ExMatEx workflow overview; definition of a programming model, programming languages, runtime systems; programming model and environments; MPI (Message Passing Interface); OpenMP; Kokkos (Performance Portable Thread-Parallel Programming Model); Kokkos abstractions, patterns, policies, and spaces; RAJA, a systematic approach to node-level portability and tuning; overview of the Legion Programming Model; mapping tasks and data to hardware resources; interoperability: supporting task-level models; Legion S3D execution and performance details; workflow, integration of external resources into the programming model.

97 MATHEMATICS AND COMPUTING↗

Exploring the interoperability of remote GPGPU virtualization using rCUDA and directive-based programming models

Directive-based programming models, such as OpenMP, OpenACC, and OmpSs, enable users to accelerate applications by using coprocessors with little effort. These devices offer significant computing power, but their use can introduce two problems: an increase in the total cost of ownership and their underutilization because not all codes match their architecture. Remote accelerator virtualization frameworks address those problems. In particular, rCUDA provides transparent access to any graphic processor unit installed in a cluster, reducing the number of accelerators and increasing their utilization ratio. Joining these two technologies, directive-based programming models and rCUDA, is thus highly appealing. In this work, we study the integration of OmpSs and OpenACC with rCUDA, describing and analyzing several applications over three different hardware configurations that include two InfiniBand interconnections and three NVIDIA accelerators. Our evaluation reveals favorable performance results, showing low overhead and similar scaling factors when using remote accelerators instead of local devices.

97 MATHEMATICS AND COMPUTING↗

Exploring the use of novel programming models in land surface models

A wide range of programming models are currently under rapid development to meet the needs of application developers looking to work on more complex machines. These models fill a variety of roles. Some look to abstract supercomputer architecture, including both processors and memory, to present a strategy for portable performance across a wide range of machines. Others look to expose concurrency by explicitly constructing task-driven dependency graphs that allow a scheduler to find parallelism. Here we explore the implications for application codes of adopting two such programming models, Kokkos and Legion, one from each class of models. We specifically focus on the software design implications on refactoring existing applications, rather than the performance and performance tuning of these models. We identify a strategy for refactoring the Energy Exascale Earth System Model's Land Surface Model, an extremely complex code for climate applications, and prototype a series of mini-apps that explore the adoption of Kokkos and Legion. In doing this, we identify commonalities across the models, leading to a series of conclusions about application software design and refactoring for the adoption of novel programming models.

Coon, Ethan↗

Program Model Checking: A Practitioner's Guide

Program model checking is a verification technology that uses state-space exploration to evaluate large numbers of potential program executions. Program model checking provides improved coverage over testing by systematically evaluating all possible test inputs and all possible interleavings of threads in a multithreaded system. Model-checking algorithms use several classes of optimizations to reduce the time and memory requirements for analysis, as well as heuristics for meaningful analysis of partial areas of the state space Our goal in this guidebook is to assemble, distill, and demonstrate emerging best practices for applying program model checking. We offer it as a starting point and introduction for those who want to apply model checking to software verification and validation. The guidebook will not discuss any specific tool in great detail, but we provide references for specific tools.

Pressburger, Thomas T.↗

SMP: A solid modeling program

A prototype solid modeling program, SMP, developed by CSC for Langley Research Center (LaRC) is documented in this paper. The SMP software is employed by the System and Experiments Branch (SEB) of the Space Systems Division (SSD) for preliminary space station design, but is intended as a general purpose tool. The SMP document provides details concerning: the basic geometric modeling primitives and associated operators, the data representation scheme utilized to structure the geometric model, the available commands for both editing and displaying the solid model, the interactive user interface and the input/output interfaces to external software, and the utility of the package in the LaRC computing environment. The document is sufficiently detailed to serve both as a user's guide and reference manual.

Randall, D. P.↗

A Comparison of Three Programming Models for Adaptive Applications

We study the performance and programming effort for two major classes of adaptive applications under three leading parallel programming models. We find that all three models can achieve scalable performance on the state-of-the-art multiprocessor machines. The basic parallel algorithms needed for different programming models to deliver their best performance are similar, but the implementations differ greatly, far beyond the fact of using explicit messages versus implicit loads/stores. Compared with MPI and SHMEM, CC-SAS (cache-coherent shared address space) provides substantial ease of programming at the conceptual and program orchestration level, which often leads to the performance gain. However it may also suffer from the poor spatial locality of physically distributed shared data on large number of processors. Our CC-SAS implementation of the PARMETIS partitioner itself runs faster than in the other two programming models, and generates more balanced result for our application.

Shan, Hong-Zhang↗

Comparing High Performance Computing Accelerator Programming Models

Accelerator devices are becoming a norm in High Performance Computing (HPC). With more systems opting for heterogeneous architectures, portable programming models like OpenMP and OpenACC are becoming increasingly important. The SPEC ACCEL 1.2 benchmark suite consists of comparable benchmarks in OpenCL, OpenMP 4.5, and OpenACC 2.5 that can be used to evaluate the performance and support for programming models and frameworks on heterogeneous platforms. In this paper we go beneath the normative metric of performance times and look at the individual kernels to study the usage, strengths, and weaknesses of the two prevalent portable heterogeneous programming models, OpenMP and OpenACC. From our analysis we identify that benchmarks like MRI-Q, SP and BT have better performance using OpenACC, while benchmarks like MiniGhost, LBM and LBDC do consistently better with the OpenMP programming model across supercomputers like Titan, and Summit.We deep dive into the kernels of select four benchmarks to answer questions like: Where does the benchmark spend most of its cycles? What is the parallelization strategy used? Why is one programming model more performant than the other? By identifying the similarities and dierences we want to contrast between the benchmark implementation strategies in the SPEC ACCEL 1.2 benchmarks and provide more insights into the OpenMP and OpenACC programming models.

Pophale, Swaroop S.↗

On the adequacy of lightweight thread approaches for high-level parallel programming models

High-level parallel programming models (PMs) are becoming crucial in order to extract the computational power of current on-node multi-threaded parallelism. The most popular PMs, such as OpenMP or OmpSs, are directive-based: the complexity of the hardware is hidden by the underlying runtime system, improving coding productivity. The implementations of OpenMP usually rely on POSIX threads (pthreads), offering excellent performance for coarse-grained parallelism and a perfect match with the current hardware. OmpSs is a task oriented PM based on an ad hoc runtime solution called Nanos++; it is the precursor of the tasking parallelism in the OpenMP tasking specification. A recent trend in runtimes and applications points to leveraging massive on-node parallelism in conjunction with fine-grained and dynamic scheduling paradigms. In this paper we analyze the behavior of the OpenMP and OmpSs PMs on top of the recently emerged Generic Lightweight Threads (GLT) API. GLT exposses a common API for lightweight thread (LWT) libraries that offers the possibility of running the same application over different native LWT solutions. We describe the design details of those high-level PMs implemented on top of GLT and analyze different scenarios in order to assess where the use of LWTs may benefit application performance. Our work reveals those scenarios where LWTs overperform pthread-based solutions and compares the performance between an ad hoc solution and a generic implementation.

97 MATHEMATICS AND COMPUTING↗

Evaluating Performance Portability of Accelerator Programming Models using SPEC ACCEL 1.2 Benchmarks

As heterogeneous architectures are becoming mainstream for HPC systems, application programmers are looking for programming model implementations that offer both performance and portability across platforms. Two directive-based programming models for accelerator programming that aim at doing this are OpenMP 4/4.5 and OpenACC. Many users want to know the difference between these two programming models, the state of their implementations, how to use them, and evaluate how suitable they are for their applications.The Standard Performance Evaluation Corporation (SPEC) ACCEL benchmarks, developed by the SPEC High Performance Group (HPG), recently released SPEC ACCEL 1.2 benchmark suite to help the evaluation of OpenCL, OpenMP 4.5 and OpenACC on different platforms. Inthis paper we present our preliminary results that evaluates OpenMP4.5 and OpenACC on a variety of accelerator-based systems: POWER9with NVIDIA V100 GPUs (Summit), Intel Xeon Phi 7230 (Percival), and AMD Bulldozer Opteron with NVIDIA K20x (Titan). Comparing these benchmarks on different systems gives us insight into the support for OpenMP and OpenACC and their execution times provide insights about their quality of implementations provided by different vendors. We also compare best of OpenMP and OpenACC to see if a particular programming model favors a particular type of benchmark kernel.

Boehm, Swen↗

Los Alamos Programming Models

This is the PDF of a powerpoint presentation from a teleconference on Los Alamos programming models. It starts by listing their assumptions for the programming models and then details a hierarchical programming model at the System Level and Node Level. Then it details how to map this to their internal nomenclature. Finally, a list is given of what they are currently doing in this regard.

97 MATHEMATICS AND COMPUTING↗

SMP: A solid modeling program version 2.0

The Solid Modeling Program (SMP) provides the capability to model complex solid objects through the composition of primitive geometric entities. In addition to the construction of solid models, SMP has extensive facilities for model editing, display, and analysis. The geometric model produced by the software system can be output in a format compatible with existing analysis programs such as PATRAN-G. The present version of the SMP software supports six primitives: boxes, cones, spheres, paraboloids, tori, and trusses. The details for creating each of the major primitive types is presented. The analysis capabilities of SMP, including interfaces to existing analysis programs, are discussed.

Randall, D. P.↗