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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 19 records

Intelligent resolution: Integrating Cryo-EM with AI-driven multi-resolution simulations to observe the severe acute respiratory syndrome coronavirus-2 replication-transcription machinery in action

The severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) replication transcription complex (RTC) is a multi-domain protein responsible for replicating and transcribing the viral mRNA inside a human cell. Attacking RTC function with pharmaceutical compounds is a pathway to treating COVID-19. Conventional tools, e.g., cryo-electron microscopy and all-atom molecular dynamics (AAMD), do not provide sufficiently high resolution or timescale to capture important dynamics of this molecular machine. Consequently, we develop an innovative workflow that bridges the gap between these resolutions, using mesoscale fluctuating finite element analysis (FFEA) continuum simulations and a hierarchy of AI-methods that continually learn and infer features for maintaining consistency between AAMD and FFEA simulations. We leverage a multi-site distributed workflow manager to orchestrate AI, FFEA, and AAMD jobs, providing optimal resource utilization across HPC centers. Our study provides unprecedented access to study the SARS-CoV-2 RTC machinery, while providing general capability for AI-enabled multi-resolution simulations at scale.

Trifan, Anda↗

Deep learning-driven super-resolution in Raman hyperspectral imaging: Efficient high-resolution reconstruction from low-resolution data

Deep learning (DL) has become an indispensable tool in hyperspectral data analysis, automatically extracting valuable features from complex, high-dimensional datasets. Super-resolution reconstruction, an essential aspect of hyperspectral data, involves enhancing spatial resolution, particularly relevant to low-resolution hyperspectral data. Yet, the pursuit of super-resolution in hyperspectral analysis is fraught with challenges, including acquiring ground truth high-resolution data for training, generalization, and scalability. The pressing issue of extended spectral acquisition times, notably for high-resolution scans, is a significant roadblock in hyperspectral imaging. Super-resolution methods offer a promising solution by providing higher spatial resolution data to expedite data collection and yield more efficient outcomes. This paper delves into a practical application of these concepts using Raman imaging, where spectral acquisition times can be prohibitively long. In this context, DL-based super-resolution models demonstrate their efficacy by predicting and reconstructing high-resolution Raman data from low-resolution input, eliminating the need for resource-intensive high-resolution scans. While previous work often relied on substantial high-resolution datasets, this study showcases the ability to achieve similar outcomes even with limited data, presenting a more practical and cost-effective approach. In conclusion, the results offer a glimpse into the transformative potential of this technology to streamline hyperspectral imaging applications by saving valuable time and resources through the successful generation of high-resolution data from low-resolution inputs.

42 ENGINEERING↗

Impacts of Spatial Resolution in a High-Fidelity Capacity Expansion Model: An ERCOT Case Study

Capacity expansion models are important tools in examining the evolution of the electric power sector. Embedded in these tools are many modeling choices with consequential impacts on computational burden and associated analysis. In this study, we adjust the spatial resolution of the Regional Energy Deployment System (ReEDS) to understand the implications of higher-fidelity modeling on energy system projections and model solve times. The native ReEDS regions capture the contiguous United States in 134 balancing areas whereas the regions in the higher-resolution version are defined by over 3,000 U.S. counties. Using both resolutions, we conduct a case study of the Texas Interconnection (The Electric Reliability Council of Texas [ERCOT]) to explore differences in model projections and to inform appropriate applications of high spatial resolution in a large-scale, applied capacity expansion model.

county↗

Determining True Sensor Spatial Resolution of Very High Resolution Optical Imagery

Some satellite data is delivered in images with gridded pixels. This gridded pixel size is often assumed to be the spatial resolution of the satellite sensor; however, this is not always the case. An image can be grided to any arbitrary pixel size, but the sensor resolution will remain constant. For example, an image with a pixel grid size much smaller than the sensor resolution will appear blurry along what should be sharp transitions. This discrepancy between an image’s pixel size and true sensor spatial resolution can be the source of much confusion and even misinformation among data users, which may lead them to waste time and resources on using images that do not suit their spatial resolution needs. This presentation will highlight our evaluation of the true spatial resolution of various government and commercial images in the pixel size range of 0.3 m to 60 m. Images evaluated include ESA’s Sentinel-2 (60 m, 20 m, 10 m pixels), USGS’s Landsat 8/9 (30 m & 15 m pixels), Planet’s SuperDoves (3 m pixels), BlackSky’s Globals (~1 m pixels), and the optical bands of Maxar’s WorldView-2 (2.4 m – 0.41 m pixels) and WorldView-3 (1.38 m – 0.31 m pixels). Our evaluation of true sensor spatial resolution, or ‘footprint size’ is based on the sensor’s line spread function (LSF). We calculate the width at half the height of the LSF to find the full width at half maximum (FWHM). The FWHM is how we report sensor spatial resolution. Different objects are examined for constructing the LSF depending on the sensor spatial resolution. Coarser resolution sensors in this evaluation such as Sentinel-2 and Landsat 8/9 are examined at bridges over a dark water background. The bright bridge acts as a line impulse, giving a sensor’s line spread function (LSF) in one direction. Additionally, we simulate the impacts of bridge width on the apparent LSF to obtain a true LSF without the effects of bridge width for these sensors. Finer resolution sensors will image the irregularities in bridges such as trusses, sidewalks, and in some cases painted lines, interfering with the LSF construction. Instead, these sensors are evaluated at large (60 m – 140 m) black and white checkerboards known as Cal/Val sites. At these locations, the image’s transition from black to white is extracted as an edge spread function (ESF). We calculate the derivative of this ESF to obtain the sensor’s LSF. From there, we find the FWHM as we do for the coarser resolution images. With the FWHM and pixel size, we determine how over- or under-sampled the images are. When the ratio of a sensor’s spatial resolution and the gridded image’s pixel size is less than 1, the image is considered under-sampled. In this case, each pixel’s information is unique but only a portion of that pixel’s ground area has been measured. On the other side, if the ratio is greater than 1, the image is considered over-sampled. That is, each pixel’s information is sourced from within the ground extent of the pixel and some extent outside additionally. We will show the true spatial resolution and the extent of over-/under-sampling in the imagery from ESA’s Sentinel-2 (60 m, 20 m, 10 m pixels), USGS’s Landsat 8/9 (30 m & 15 m pixels), Planet’s SuperDoves (3 m pixels), BlackSky’s Globals (~1 m pixels), and the optical bands of Maxar’s WorldView-2 (2.4 m – 0.41 m pixels) and WorldView-3 (1.38 m – 0.31 m pixels).

Alana Semple↗

High Resolution Image Reconstruction from Projection of Low Resolution Images DIffering in Subpixel Shifts

In this paper, we demonstrate a simple algorithm that projects low resolution (LR) images differing in subpixel shifts on a high resolution (HR) also called super resolution (SR) grid. The algorithm is very effective in accuracy as well as time efficiency. A number of spatial interpolation techniques using nearest neighbor, inverse-distance weighted averages, Radial Basis Functions (RBF) etc. used in projection yield comparable results. For best accuracy of reconstructing SR image by a factor of two requires four LR images differing in four independent subpixel shifts. The algorithm has two steps: i) registration of low resolution images and (ii) shifting the low resolution images to align with reference image and projecting them on high resolution grid based on the shifts of each low resolution image using different interpolation techniques. Experiments are conducted by simulating low resolution images by subpixel shifts and subsampling of original high resolution image and the reconstructing the high resolution images from the simulated low resolution images. The results of accuracy of reconstruction are compared by using mean squared error measure between original high resolution image and reconstructed image. The algorithm was tested on remote sensing images and found to outperform previously proposed techniques such as Iterative Back Projection algorithm (IBP), Maximum Likelihood (ML), and Maximum a posterior (MAP) algorithms. The algorithm is robust and is not overly sensitive to the registration inaccuracies.

A large area 100-channel PICOSEC Micromegas detector with time resolution at the 20 ps level

Abstract The PICOSEC Micromegas precise timing detector is based on a Cherenkov radiator coupled to a photocathode operating in a semi-transparent mode and a Micromegas amplification structure. The first proof of concept single-channel prototype was able to achieve a time resolution below 25 ps. One of the crucial aspects in the development of precise timing gaseous detectors applicable in high-energy physics experiments is a modular design that enables large area coverage. The first 19-channel multi-pad prototype with an active area of approximately 10 cm 2 suffered from degraded timing resolution due to the non-uniformity of the preamplification gap thickness. A new 100 cm 2 detector module with 100 channels based on a rigid hybrid ceramic/FR4 Micromegas board for improved drift gap uniformity was developed. Initial measurements with 80 GeV/c muons showed improvements in timing response over the measured pads and a time resolution below 25 ps. More recent measurements with a thinner drift gap detector module and newly developed RF pulse amplifiers show that the pad centre resolution can be enhanced to the level of 17 ps. This work will present the development of the detector from structural simulations, design, and beam test commissioning with a focus on the timing performance of a thinner drift gap detector module in combination with new electronics using an automated timing scan method.

Utrobicic, A.↗

The impacts of horizontal resolution on the seasonally-dependent biases of the northeastern Pacific ITCZ in coupled climate models.

Double-ITCZ has puzzled climate model community for more than two decades. Here, we found that over the eastern Pacific, precipitation and sea surface temperature (SST) biases in the NCAR CESM1 are seasonally-dependent, with positive (negative) precipitation/SST biases during boreal summer/fall (winter/spring), although the easterly wind bias persists around the year. This seasonally-dependent bias of precipitation/SST is found to be caused by the failure of the model to reproduce the climatological seasonal wind reversal of North American monsoon. During winter/spring, the climatological easterly wind dominates, so the stronger wind speed in the model enhances the evaporation and lowers the SST. It is opposite when the climatological wind turns to westerly during summer/fall. The easterly wind bias also occurs in the atmospheric model when the observation SST is prescribed, suggesting it is of atmospheric origin. Further, the easterly wind bias is mainly evident in the lower troposphere and quite independent of time, implying the effect of complex and narrow-ranged Central American topography, which is not depicted well in the coarse model resolution. When the model resolution is doubled, both SST and precipitation are improved with the reduced easterly wind bias. During boreal spring, when ITCZ bias is most significant, the northern and southern ITCZ can be improved by 29% and 18.8% respectively in the higher resolution. Finally, we suggest that these seasonally-dependent biases over the eastern Pacific are quite universal among 37 CMIP5 coupled models, and the ongoing CMIP6 project will provide a valuable opportunity to examine whether the bias can be reduced by increasing model resolution.

Song, Fengfei↗

Super-resolution computational saturated absorption microscopy

Imaging beyond the diffraction limit barrier has attracted wide attention due to the ability to resolve previously hidden image features. Of the various super-resolution microscopy techniques available, a particularly simple method called saturated excitation microscopy (SAX) requires only simple modification of a laser scanning microscope: The illumination beam power is sinusoidally modulated and driven into saturation. SAX images are extracted from the harmonics of the modulation frequency and exhibit improved spatial resolution. Unfortunately, this elegant strategy is hindered by the incursion of shot noise that prevents high-resolution imaging in many realistic scenarios. Here, we demonstrate a technique for super-resolution imaging that we call computational saturated absorption (CSA) in which a joint deconvolution is applied to a set of images with diversity in spatial frequency support among the point spread functions (PSFs) used in the image formation with saturated laser scanning fluorescence microscopy. CSA microscopy allows access to the high spatial frequency diversity in a set of saturated effective PSFs, while avoiding image degradation from shot noise.

Murray, Gabe (ORCID:0000000295655485)↗

Multi-resolution Arctic Shrub Cover Dataset Derived from UAS and Airborne SfM and LiDAR (2013-2025)

We synthesized 177 unoccupied aerial system flights and 77 airborne flights across the Arctic and created a multi-resolution benchmark data of low-to-tall shrub fractional cover leveraging Structure-from-Motion and Light Detection and Ranging. The resulting dataset covered a total of 1899 km2 across Alaska, Western Canada, Sweden, and Siberian Arctic, including key sites from the Oro Arctic to the High Arctic. The dataset is organized into 6 primary data collection directories (“Abisko,” “AWI,” “ERE,” “Fairbanks,” “NGEE,” “Toolik”), each containing site and flight subdirectories. Flight directories include shrub cover rasters (*.tifs) at 1 m, 5 m, and 30 m resolution, the canopy height model at 1 m resolution (*.tifs), and a bounding box *.kml file. For the AWI, Abisko, NGEE, and Fairbanks collections, we also include the GCC raster at 1 m resolution (*.tif). Files are organized by Collection > Site > Flight Name > Data Files. Flight rasters are in the local UTM zone and the .kml files are in the geographic coordinate system EPSG 4326. We also include a .csv file that details the source datasets for every flight. The Next-Generation Ecosystem Experiments in the Arctic (NGEE Arctic) project is a research effort to reduce uncertainty in the Department of Energy’s Energy Exascale Earth System Model (E3SM) by developing a predictive understanding of Arctic tundra ecosystems underlain by permafrost and to quantify feedbacks from the Arctic tundra to the Earth system. NGEE Arctic is supported by the Department of Energy's Office of Biological and Environmental Research. Over Phases 1–3, observations made by the NGEE Arctic team across a gradient of permafrost landscapes in Arctic Alaska improved the representation of tundra processes in the land surface component of E3SM (the E3SM Land Model, ELM). Model improvements emphasized unique aspects of permafrost environments and explored reductions in model complexity while retaining predictive power. The Arctic-informed ELM developed by NGEE Arctic has been used to make novel predictions on processes ranging from permafrost thaw to soil biogeochemical cycling to Earth system feedbacks associated with the unique characteristics of tundra plants. In Phase 4, the NGEE Arctic team is evaluating our new predictive understanding under novel conditions across the Arctic domain. In collaboration with partners at long-term pan-Arctic research sites we are examining whether an Arctic-informed ELM can faithfully simulate interactions among surface and subsurface processes at site, regional, and pan-Arctic scales. In turn, we are using variety of tools to dynamically extend and evaluate ELM inference, with an emphasis on data synthesis and pan-Arctic model evaluation, reintegration of code with an evolving E3SM, scaling across heterogeneous Arctic landscapes, and the appropriate representation of the impacts of increasingly frequent Arctic disturbances.

canopy height model↗

Evaluating fine-resolution, regional outputs of a variable resolution global climate model

Climate models have been used to study water resources and regional hydrologic responses to climate change, but climate model outputs must be downscaled to provide relevant regional data. However, the accuracy of this regional data is limited by uncertainties across and within downscaling methods, uncertainty across global outputs, and discontinuities at downscaled boundaries. A new alternative to traditional downscaling is a variable resolution model that incorporates fine-resolution regions directly into a coarse-resolution, global climate simulation in order to capture contiguous dynamics across resolution boundaries. In this study, we used the Variable-Resolution Community Earth System Model (VR-CESM) to generate one-eighth degree (14 km) fine-resolution outputs for the western U.S. and eastern China from 1970-2006. We focus our evaluation on precipitaiton, temperature, snow pack, solar radiation, and wind. We compare the model outputs with remote-sensing-based precipitation data, and both reanalysis and gridded weather station data for precipitation and temperature. VR-CESM generally has a cold bias in winter and a warm bias in summer in the western U.S., which compensate each other to reduce the annual bias. In eastern China, however, the sign of temperature biases are more consistent throughout the year with cold biases in the higher mountains and warm biases throughout most of the rest of the region. Precipitation biases are dependent upon reference data, and show slight overestimation in high mountain regions in both the U.S. and China with respect to gridded weather station data. Simulated snow cover in the western U.S. is reasonable compared to remote sensing data, but snow cover and snow water equivalent have larger biases when compared to reanalysis data. In eastern China there are widespread snow cover biases compared to remote sensing data. VR-CESM underestimates downward shortwave radiation to a greater degree in summer than in winter, and underestimates surface layer windspeed over mountains to a greater degree than in other areas. Comparison between VR-CESM and a coarser simulation (1-degree Beijing Climate Center model) shows reduced precipitation biases in the mountainous regions with finer resolution, indicating the value of variable-resolution modeling for reigonal studies.

Di Vittorio, Alan↗

Reconstructing High Resolution ESM Data Through a Novel Fast Super Resolution Convolutional Neural Network (FSRCNN)

In this work, we present the first application of a fast super resolution convolutional neural network (FSRCNN) based approach for downscaling earth system model (ESM) simulations. Unlike other SR approaches, FSRCNN uses the same input feature dimensions as the low resolution input. This allows it to have smaller convolution layers, avoiding over-smoothing, and reducing computational costs. We adapt the FSRCNN to improve reconstruction on ESM data, we term the FSRCNN-ESM. We use high-resolution (~0.25°) monthly averaged model output of five surface variables over North America from the US Department of Energy's Energy Exascale Earth System Model's control simulation. These high-resolution and corresponding coarsened low-resolution (~1°) pairs of images are used to train the FSRCNN-ESM and evaluate its use as a downscaling approach. We find that FSRCNN-ESM outperforms FSRCNN and other super-resolution methods in reconstructing high resolution images producing finer spatial scale features with better accuracy for surface temperature, surface radiative fluxes, and precipitation.

58 GEOSCIENCES↗

Optimal spectral resolution for solids and liquids using FT and other infrared spectrometers: How much resolution do you really need?

In this study we investigate the possibility of using spectral resolutions for infrared measurements of solids and liquids that are not powers of two, e.g. are not at 1, 2, 4, 8, or 16 cm-1 resolution. In almost all reported literature of the last fifty years the resolution used to record for a Fourier transform infrared spectrum has been a power of two. This stems from the fact that 1) the Cooley-Tukey algorithm used to compute such a transform was constructed to use only powers of two and was also driven by 2) the fact that the computing horsepower required to compute the Fourier transform increases as N?log?_2 (N), where N is the number of points in the interferogram (spectrum). For typical spectra, however, the CPU time is no longer a consideration. Our study is based on both liquid and solid spectra, all of which were recorded at 2 cm-1 resolution. There were at total of 70 solids spectra representing 2,472 spectral peaks and 61 liquids spectra (1,765 spectral peaks), each peak being inspected for being singlet / multiplet in nature. Of the 1,765 liquid bands examined, only 27 had widths less than 5 cm-1. Of the 2,472 solid bands examined, only 39 peaks have widths less than 5 cm-1. For liquids, the mean peak width is 24.7 cm-1 but the median peak width is 13.7 cm-1, and, similarly, for solids, the mean peak width is 22.2 cm-1 but the median peak width is 11.2 cm-1. In both cases, solids and liquids, a skewed peak widths distribution was observed, the peak of the distribution representing narrower bands in the 7 to 9 cm-1 FWHM range but displaying a long tail to the very broad bands, with some displaying spectral widths of 100 cm-1 or more. Because one of the most important criteria for successful instrumental design in IR spectroscopy is the spectral resolution, the data were further analyzed showing that a value to resolve 95% of all bands is 5.7 cm-1 for liquids and 5.3 cm-1 for solids; such a resolution would capture the native linewidth (no instrumental broadening) of 95% of all the solids and liquid bands, respectively. Based on the present results we suggest that, when accounting only for intrinsic linewidths an optimized resolution of 6.0 cm-1 will capture 91% of all condensed-phase bands for IR detection of chemical, mineral, and biological materials.

Forland, Brenda M.↗

The ongoing need for high-resolution regional climate models: Process understanding and stakeholder information

Regional climate modeling addresses our need to understand and simulate climatic processes and phenomena unresolved in global models. High resolution models are generally more skillful in simulating extremes, such as heavy precipitation, strong winds, and severe storms. In addition, research has shown that fine-scale features such as mountains, coastlines, lakes, irrigation, land use, and urban heat islands can substantially influence a region’s climate and its response to changing forcings. Regional climate simulations explicitly simulating convection are now being performed, providing an opportunity to illuminate new physical behavior that previously was represented by parameterizations with large uncertainties. Regional and global models are both advancing toward higher resolution, as computational capacity increases. However, the resolution and ensemble size necessary to produce a sufficient statistical sample of these processes in global models has proven too costly for contemporary supercomputing systems. Regional climate models are thus indispensable tools that complement global models for understanding regional climate variability and change, and are critical for supporting societal responses to changing climate.

Gutowski, William↗

The Impact of Horizontal and Temporal Resolution on Convection and Precipitation with High-Resolution GEOS-5

Using a high-resolution non-hydrostatic version of GEOS-5 with the cubed-sphere finite-volume dynamical core, the impact of spatial and temporal resolution on cloud properties will be evaluated. There are indications from examining convective cluster development in high resolution GEOS-5 forecasts that the temporal resolution within the model may playas significant a role as horizontal resolution. Comparing modeled convective cloud clusters versus satellite observations of brightness temperature, we have found that improved. temporal resolution in GEOS-S accounts for a significant portion of the improvements in the statistical distribution of convective cloud clusters. Using satellite simulators in GEOS-S we will compare the cloud optical properties of GEOS-S at various spatial and temporal resolutions with those observed from MODIS. The potential impact of these results on tropical cyclone formation and intensity will be examined as well.

Putman, William P.↗