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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 19 records

High-efficiency Agrobacterium-mediated transformation of Norway spruce (Picea abies) and loblolly pine (Pinus taeda)

Agrobacterium-mediated gene transfer is the method of choice for many plant biotechnology laboratories; however, large-scale use of this organism in conifer transformation has been limited by difficult propagation of explant material, selection efficiencies and low transformation frequency. We have analyzed co-cultivation conditions and different disarmed strains of Agrobacterium to improve transformation. Additional copies of virulence genes were added to three common disarmed strains. These extra virulence genes included either a constitutively active virG or extra copies of virG and virB, both from pTiBo542. In experiments with Norway spruce, we increased transformation efficiencies 1000-fold from initial experiments where little or no transient expression was detected. Over 100 transformed lines expressing the marker gene beta-glucuronidase (GUS) were generated from rapidly dividing embryogenic suspension-cultured cells co-cultivated with Agrobacterium. GUS activity was used to monitor transient expression and to further test lines selected on kanamycin-containing medium. In loblolly pine, transient expression increased 10-fold utilizing modified Agrobacterium strains. Agrobacterium-mediated gene transfer is a useful technique for large-scale generation of transgenic Norway spruce and may prove useful for other conifer species.

NASA Discipline Plant Biology↗

Relating Radar Backscatter to Boreal Forest Canopy Parameters

During the first intensive field campaign for the Boreal Ecosystem Atmospheric Study (BOREAS) in August of 1993, AIRSAR data were acquired over the entire BOREAS study area. On of the objectives of the AIRSAR deployment was to examine the sensitivity of the radar signal to vegetation type and biomass distribution in the boreal forest and to develop algorithms for inferring vegetation parameters. During the experiment a set of ground measurements were also made to support the AIRSAR data analysis. The dominant stands in the study area consist of black spruce, young jack pine, old jack pine, and aspen. These stands represent a wide range of biomass and canopy architectural variations which can be distinguished in SAR images.

radar backscatter↗

Coral Reef Early Warning System (CREWS) RPC Experiment

This viewgraph document reviews the background, objectives, methodology, validation, and present status of the Coral Reef Early Warning System (CREWS) Rapid Prototyping Capability (RPC) experiment. The potential NASA contribution to CREWS Decision Support Tool (DST) centers on remotely sensed imagery products.

Estep, Leland↗

Potential of VIIRS Time Series Data for Aiding the USDA Forest Service Early Warning System for Forest Health Threats: A Gypsy Moth Defoliation Case Study

The Healthy Forest Restoration Act of 2003 mandated that a national forest threat Early Warning System (EWS) be developed. The USFS (USDA Forest Service) is currently building this EWS. NASA is helping the USFS to integrate remotely sensed data into the EWS, including MODIS data for monitoring forest disturbance at broad regional scales. This RPC experiment assesses the potential of VIIRS (Visible/Infrared Imager/Radiometer Suite) and MODIS (Moderate Resolution Imaging Spectroradiometer) data for contribution to the EWS. In doing so, the RPC project employed multitemporal simulated VIIRS and MODIS data for detecting and monitoring forest defoliation from the non-native Eurasian gypsy moth (Lymantria despar). Gypsy moth is an invasive species threatening eastern U.S. hardwood forests. It is one of eight major forest insect threats listed in the Healthy Forest Restoration Act of 2003. This RPC experiment is relevant to several nationally important mapping applications, including carbon management, ecological forecasting, coastal management, and disaster management

Spruce, Joseph P.↗

Ectomycorrhizal Community Structure and Soil Characteristics of Mature Lodgepole Pine (Pinus Contorta) and Adjacent Stands of Old Growth Mixed Conifer in Yellowstone National Park, Wyoming USA

Forest development patterns following disturbance are known to influence the physical and chemical attributes of soils at different points in time. Changes in soil resources are thought to have a corresponding effect on ectomycorrhizal (ECM) community structure. We used molecular methods to compare below-ground ECM species richness, composition, and abundance between adjacent stands of homogenous lodgepole pine and old growth mixed conifer in Yellowstone National Park (YNP). In each stand-type we collected soil cores to both identify mycorrhizae and assess soil chemistry. Although no statistical difference was observed in the mean number of ECM root tips per core between stand types, the total number of species identified (85 versus 35) and the mean number of species per core (8.8 +/- 0.6 versus 2.5 +/- 0.3) were significantly higher in lodgepole pine. Differences between the actual and estimated species richness levels indicated that these forest types support a high number of ECM species and that undersampling was severe. Species compositions were widely disparate between stands where only four species were shared out of a total of 116. Soil analysis also revealed that mixed conifer was significantly lower in pH, but higher in organic matter, potassium, phosphorus, and ammonium when compared to lodgepole pine stands. Species richness per core was correlated with these chemical data, however, analysis of covariance indicated that stand type was the only statistically significant factor in the observed difference in species richness. Our data suggest that ECM fungal richness increases as homogenous lodgepole pine stands grow and mature, but declines after Engelmann spruce and subalpine fir colonize. Despite difficulties linking species composition with soil chemistry, there are a variety of physical and chemical factors that could be influencing ECM community structure. Future field experiments are necessary to test some of the mechanisms potentially operating within this system.

Douglas, Robert B.↗

Coral Reef Remote Sensing using Simulated VIIRS and LDCM Imagery

The Rapid Prototyping Capability (RPC) node at NASA Stennis Space Center, MS, was used to simulate NASA next-generation sensor imagery over well-known coral reef areas: Looe Key, FL, and Kaneohe Bay, HI. The objective was to assess the degree to which next-generation sensor systems the Visible/Infrared Imager/Radiometer Suite (VIIRS) and the Landsat Data Continuity Mission (LDCM) might provide key input to the National Oceanographic and Atmospheric Administration (NOAA) Integrated Coral Observing Network (ICON)/Coral Reef Early Warning System (CREWS) Decision Support Tool (DST). The DST data layers produced from the simulated imagery concerned water quality and benthic classification map layers. The water optical parameters of interest were chlorophyll (Chl) and the absorption coefficient (a). The input imagery used by the RPC for simulation included spaceborne (Hyperion) and airborne (AVIRIS) hyperspectral data. Specific field data to complement and aid in validation of the overflight data was used when available. The results of the experiment show that the next-generation sensor systems are capable of providing valuable data layer resources to NOAA's ICON/CREWS DST.

Estep, Leland↗

Coral Reef Remote Sensing Using Simulated VIIRS and LDCM Imagery

The Rapid Prototyping Capability (RPC) node at NASA Stennis Space Center, MS, was used to simulate NASA next-generation sensor imagery over well-known coral reef areas: Looe Key, FL, and Kaneohe Bay, HI. The objective was to assess the degree to which next-generation sensor systems-the Visible/Infrared Imager/Radiometer Suite (VIIRS) and the Landsat Data Continuity Mission (LDCM)- might provide key input to the National Oceanographic and Atmospheric Administration (NOAA) Integrated Coral Observing Network (ICON)/Coral Reef Early Warning System (CREWS) Decision Support Tool (DST). The DST data layers produced from the simulated imagery concerned water quality and benthic classification map layers. The water optical parameters of interest were chlorophyll (Chl) and the absorption coefficient (a). The input imagery used by the RPC for simulation included spaceborne (Hyperion) and airborne (AVIRIS) hyperspectral data. Specific field data to complement and aid in validation of the overflight data was used when available. The results of the experiment show that the next-generation sensor systems are capable of providing valuable data layer resources to NOAA s ICON/CREWS DST.

Estep, Leland↗

Field testing of thermal canopy models in a spruce-fir forest

Recent advances in remote sensing technology allow the use of the thermal infrared region to gain information about vegetative surfaces. Extending existing models to account for thermal radiance transfers within rough forest canopies is of paramount importance. This is so since all processes of interest in the physical climate system and biogeochemical cycles are thermally mediated. Model validation experiments were conducted at a well established boreal forest; northern hardwood forest ecotone research site located in central Maine. Data was collected to allow spatial and temporal validation of thermal models. Emphasis was placed primarily upon enhancing submodels of stomatal behavior, and secondarily upon enhancing boundary layer resistance submodels and accounting for thermal storage in soil and vegetation.

Source record↗

Biophysical, morphological, canopy optical property, and productivity data from the Superior National Forest

Described here are the results of a NASA field experiment conducted in the Superior National Forest near Ely, Minnesota, during the summers of 1983 and 1984. The purpose of the experiment was to examine the use of remote sensing to provide measurements of biophysical parameters in the boreal forests. Leaf area index, biomass, net primary productivity, canopy coverage, overstory and understory species composition data are reported for about 60 sites, representing a range of stand density and age for aspen and spruce. Leaf, needle, and bark high-resolution spectral reflectance and transmittance data are reported for the major boreal forest species. Canopy bidirectional reflectance measurements are provided from a helicopter-mounted Barnes Multiband Modular Radiometer (MMR) and the Thematic Mapper Simulator (TMS) on the NASA C-130 aircraft.

Hall, F. G.↗

Regional Sediment Management Experiment Using the Visible/Infrared Imager/Radiometer Suite and the Landsat Data Continuity Mission Sensor

The central aim of this RPC (Rapid Prototyping Capability) experiment is to demonstrate the use of VIIRS (Visible/Infrared Imager/ Radiometer Suite and LDCM (Landsat Data Continuity Mission) sensors as key input to the RSM (Regional Sediment Management) GIS (geographic information system) DSS (Decision Support System). The project affects the Coastal Management National Application.

Estep, Leland↗

Assessing Potential of VIIRS Data for Contribution to a Forest Threat Early Warning System

This viewgraph presentation reviews the contributions by the Rapid Prototyping Capability (RPC) towards using Visible Infrared Imager / Radiometer Suite (VIIRS) data in assessing the damage to forests. The Healthy Forest Restoration Act of 2003 mandates development of national Early Warning System (EWS) for forest threat monitoring and mitigation. NASA Stennis is working with the US Forest Service to develop needed components of this EWS. The use of MODIS data for monitoring forest disturbance at broad regional scales is a componet of this program. This RPC experiment was initiated to assess potential of the MODIS follow-on, VIIRS, for monitoring forest disturbance at broad scales and thereby contributing to the EWS. This presentation reviews the potential use of the VIIRS to examine the damage to forests caused by gyspy moths in the West Virginia and Virginia area.

Spruce, Joseph P.↗

The Use of Simulated Visible/Infrared Imager/Radiometer Suite (VIIRS) and Landsat Data Continuity Mission (LDCM) Imagery for Coral Reef Monitoring

Coral reefs are some of the most biologically rich and economically important ecosystems on Earth. Coral reefs are Earth's largest biological structures and have taken thousands of years to form. Coral reefs not only provide important habitat for many marine animals and plants, but they also provide humanity with food, jobs, chemicals, protection against storms, and life-saving pharmaceuticals. Severe bleaching events have occurred that have dramatic long-term ecological impacts to corals, including loss of reef-building corals, changes in benthic habitat, and, in some cases, changes in larval fish populations (Holden and Ledrew, 1998). Some researchers suggest that 10 percent of Earth s coral reefs have already been destroyed and that another 60 percent are in danger. Scientists have proposed that as much as 95 percent of Jamaica's reefs are dying or dead. This poster reports on a Rapid Prototyping Capability (RPC) experiment done to determine whether future NASA sensors - the Visible/Infrared Imager/Radiometer Suite (VIIRS) and Landsat Data Continuity Mission (LDCM) - could generate key data products for the Integrated Coral Reef Observation Network (ICON)/Coral Reef Early Warning System (CREWS) Decision Support Tool (DST) operated by the National Oceanic and Atmospheric Administration (NOAA).

Estep, L.↗

Simulated NASA Satellite Data Products for the NOAA Integrated Coral Reef Observation Network/Coral Reef Early Warning System

This RPC (Rapid Prototyping Capability) experiment will demonstrate the use of VIIRS (Visible/Infrared Imager/Radiometer Suite) and LDCM (Landsat Data Continuity Mission) sensor data as significant input to the NOAA (National Oceanic and Atmospheric Administration) ICON/ CREWS (Integrated Coral Reef Observation System/Coral Reef Early Warning System). The project affects the Coastal Management Program Element of the Applied Sciences Program.

Estep, Leland↗

Climate-Induced Boreal Forest Change: Predictions versus Current Observations

For about three decades, there have been many predictions of the potential ecological response in boreal regions to the currently warmer conditions. In essence, a widespread, naturally occurring experiment has been conducted over time. In this paper, we describe previously modeled predictions of ecological change in boreal Alaska, Canada and Russia, and then we investigate potential evidence of current climate-induced change. For instance, ecological models have suggested that warming will induce the northern and upslope migration of the treeline and an alteration in the current mosaic structure of boreal forests. We present evidence of the migration of keystone ecosystems in the upland and lowland treeline of mountainous regions across southern Siberia. Ecological models have also predicted a moisture-stress-related dieback in white spruce trees in Alaska, and current investigations show that as temperatures increase, white spruce tree growth is declining. Additionally, it was suggested that increases in infestation and wildfire disturbance would be catalysts that precipitate the alteration of the current mosaic forest composition. In Siberia, five of the last seven years have resulted in extreme fire seasons, and extreme fire years have also been more frequent in both Alaska and Canada. In addition, Alaska has experienced extreme and geographically expansive multi-year outbreaks of the spruce beetle, which had been previously limited by the cold, moist environment. We suggest that there is substantial evidence throughout the circumboreal region to conclude that the biosphere within the boreal terrestrial environment has already responded to the transient effects of climate change. Additionally, temperature increases and warming-induced change are progressing faster than had been predicted in some regions, suggesting a potential non-linear rapid response to changes in climate, as opposed to the predicted slow linear response to climate change.

Soja, Amber J.↗

Development of an L-, C-, and X-band radar for backscattering studies over vegetation

With the recent surge of interest in global change, the impact of different ecosystems on the Earth's carbon budget has become the focus of many scientific studies. Studies have been launched by NASA and other agencies to address this issue. One such study is the Boreal Ecosystem-Atmosphere Study (BOREAS). BOREAS focuses on the boreal ecosystem in Northern Canada. As a part of the BOREAS study, we have developed a helicopter-borne three-band radar system for measuring the scattering coefficient of various stands within the boreal forest. During the summer of 1994 the radar was used at the southern study area (SSA) in Saskatchewan over the young jack pine (YJP), old jack pine (OJP), old black spruce (OBS) and old aspen (OA) sites. The data collected will be used to study the interaction of microwaves with forest canopy. By making use of three different frequency bands the contribution to the backscatter from each of the layers within the canopy can be determined. Using the knowledge gained from these studies, we will develop algorithms to enable more accurate interpretation of SAR images of the boreal region. This report describes in detail the development of the L-, C- and X-band radar system. The first section provides background information and explains the objectives of the boreal forest experiment. The second section describes the design and implementation of the radar system. All of the subsystems of the radar are explained in this section. Next, problems that were encountered during system testing and the summer experiments are discussed. System performance and results are then presented followed by a section on conclusions and further work.

Lockhart, G. Lance↗

Monitoring Regional Forest Disturbances across the US with near Real Time MODIS NDVI Products Resident to the ForWarn Forest Threat Early Warning System

Forest threats across the US have become increasingly evident in recent years. Sometimes these have resulted in regionally evident disturbance progressions (e.g., from drought, bark beetle outbreaks, and wildfires) that can occur across multiyear durations and have resulted in extensive forest overstory mortality. In addition to stand replacement disturbances, other forests are subject to ephemeral, sometimes yearly defoliation from various insects and varying types and intensities of ephemeral damage from storms. Sometimes, after prolonged severe disturbance, signs of recovery in terms of Normalized Difference Vegetation Index (NDVI) can occur. The growing prominence and threat of forest disturbances in part have led to the formation and implementation of the 2003 Healthy Forest Restoration Act which mandated that national forest threat early warning system be developed and deployed. In response, the US Forest Service collaborated with NASA, DOE Oakridge National Laboratory, and the USGS Eros Data Center to build and roll-out the near real time ForWarn early warning system for monitoring regionally evident forest disturbances. Given the diversity of disturbance types, severities, and durations, ForWarn employs multiple historical baselines that are used with current NDVI to derive a suite of six forest change products that are refreshed every 8 days. ForWarn employs daily quarter kilometer MODIS NDVI data from the Aqua and Terra satellites, including MOD13 data for deriving historical baseline NDVIs and eMODIS 7 NDVI for compiling current NDVI. In doing so, the Time Series Product Tool and the Phenological Parameters Estimation Tool are used to temporally de-noise, fuse, and aggregate current and historical MODIS NDVIs into 24 day composites refreshed every 8 days with 46 dates of products per year. The 24 day compositing interval enables disturbances to be detected, while minimizing the frequency of residual atmospheric contamination. Forest change products are computed versus the previous 1, previous 3, and all previous years in the MODIS record for a given 24 day interval. Other "weekly" forest change products include one computed using an adaptive length compositing method for quicker detection of disturbances, two others that adjust for seasonal fluctuations in normal vegetation phenology (e.g., early versus late springs). This overall approach enables forest disturbance dynamics from a variety of regionally evident biotic and abiotic forest disturbances to be viewed and assessed through the calendar year. The change products are also being utilized for forest change trend analysis and for developing regional forest overstory mortality products. ForWarn's forest change products are used to alert forest health specialists about new forest disturbances. Such alerts are also typically based on available Landsat, aerial, and ground data as well as communications with forest health specialists and previous experience. ForWarn products have been used to detect and track many types of regional disturbances to multiple forest types, including defoliation from caterpillars and severe storms, as well as mortality from both biotic and abiotic agents (e.g., bark beetles, drought, fire, anthropogenic clearing). ForWarn offers products that could be combined with other geospatial data on forest biomass to assess forest disturbance carbon impacts within the conterminous US.

Spruce, Joseph P.↗

Potential of VIIRS Time Series Data for Aiding the USDA Forest Service Early Warning System for Forest Health Threats: A Gypsy Moth Defoliation Case Study

This report details one of three experiments performed during FY 2007 for the NASA RPC (Rapid Prototyping Capability) at Stennis Space Center. This RPC experiment assesses the potential of VIIRS (Visible/Infrared Imager/Radiometer Suite) and MODIS (Moderate Resolution Imaging Spectroradiometer) data for detecting and monitoring forest defoliation from the non-native Eurasian gypsy moth (Lymantria dispar). The intent of the RPC experiment was to assess the degree to which VIIRS data can provide forest disturbance monitoring information as an input to a forest threat EWS (Early Warning System) as compared to the level of information that can be obtained from MODIS data. The USDA Forest Service (USFS) plans to use MODIS products for generating broad-scaled, regional monitoring products as input to an EWS for forest health threat assessment. NASA SSC is helping the USFS to evaluate and integrate currently available satellite remote sensing technologies and data products for the EWS, including the use of MODIS products for regional monitoring of forest disturbance. Gypsy moth defoliation of the mid-Appalachian highland region was selected as a case study. Gypsy moth is one of eight major forest insect threats listed in the Healthy Forest Restoration Act (HFRA) of 2003; the gypsy moth threatens eastern U.S. hardwood forests, which are also a concern highlighted in the HFRA of 2003. This region was selected for the project because extensive gypsy moth defoliation occurred there over multiple years during the MODIS operational period. This RPC experiment is relevant to several nationally important mapping applications, including agricultural efficiency, coastal management, ecological forecasting, disaster management, and carbon management. In this experiment, MODIS data and VIIRS data simulated from MODIS were assessed for their ability to contribute broad, regional geospatial information on gypsy moth defoliation. Landsat and ASTER (Advanced Spaceborne Thermal Emission and Reflection Radiometer) data were used to assess the quality of gypsy moth defoliation mapping products derived from MODIS data and from simulated VIIRS data. The project focused on use of data from MODIS Terra as opposed to MODIS Aqua mainly because only MODIS Terra data was collected during 2000 and 2001-years with comparatively high amounts of gypsy moth defoliation within the study area. The project assessed the quality of VIIRS data simulation products. Hyperion data was employed to assess the quality of MODIS-based VIIRS simulation datasets using image correlation analysis techniques. The ART (Application Research Toolbox) software was used for data simulation. Correlation analysis between MODIS-simulated VIIRS data and Hyperion-simulated VIIRS data for red, NIR (near-infrared), and NDVI (Normalized Difference Vegetation Index) image data products collectively indicate that useful, effective VIIRS simulations can be produced using Hyperion and MODIS data sources. The r(exp 2) for red, NIR, and NDVI products were 0.56, 0.63, and 0.62, respectively, indicating a moderately high correlation between the 2 data sources. Temporal decorrelation from different data acquisition times and image misregistration may have lowered correlation results. The RPC experiment also generated MODIS-based time series data products using the TSPT (Time Series Product Tool) software. Time series of simulated VIIRS NDVI products were produced at approximately 400-meter resolution GSD (Ground Sampling Distance) at nadir for comparison to MODIS NDVI products at either 250- or 500-meter GSD. The project also computed MODIS (MOD02) NDMI (Normalized Difference Moisture Index) products at 500-meter GSD for comparison to NDVI-based products. For each year during 2000-2006, MODIS and VIIRS (simulated from MOD02) time series were computed during the peak gypsy moth defoliation time frame in the study area (approximately June 10 through July 27). Gypsy moth defoliation mapping products from simated VIIRS and MOD02 time series were produced using multiple methods, including image classification and change detection via image differencing. The latter enabled an automated defoliation detection product computed using percent change in maximum NDVI for a peak defoliation period during 2001 compared to maximum NDVI across the entire 2000-2006 time frame. Final gypsy moth defoliation mapping products were assessed for accuracy using randomly sampled locations found on available geospatial reference data (Landsat and ASTER data in conjunction with defoliation map data from the USFS). Extensive gypsy moth defoliation patches were evident on screen displays of multitemporal color composites derived from MODIS data and from simulated VIIRS vegetation index data. Such defoliation was particularly evident for 2001, although widespread denuded forests were also seen for 2000 and 2003. These visualizations were validated using aforementioned reference data. Defoliation patches were visible on displays of MODIS-based NDVI and NDMI data. The viewing of apparent defoliation patches on all of these products necessitated adoption of a specialized temporal data processing method (e.g., maximum NDVI during the peak defoliation time frame). The frequency of cloud cover necessitated this approach. Multitemporal simulated VIIRS and MODIS Terra data both produced effective general classifications of defoliated forest versus other land cover. For 2001, the MOD02-simulated VIIRS 400-meter NDVI classification produced a similar yet slightly lower overall accuracy (87.28 percent with 0.72 Kappa) than the MOD02 250-meter NDVI classification (88.44 percent with 0.75 Kappa). The MOD13 250-meter NDVI classification had a lower overall accuracy (79.13 percent) and a much lower Kappa (0.46). The report discusses accuracy assessment results in much more detail, comparing overall classification and individual class accuracy statistics for simulated VIIRS 400-meter NDVI, MOD02 250-meter NDVI, MOD02-500 meter NDVI, MOD13 250-meter NDVI, and MOD02 500-meter NDMI classifications. Automated defoliation detection products from simulated VIIRS and MOD02 data for 2001 also yielded similar, relatively high overall classification accuracy (85.55 percent for the VIIRS 400-meter NDVI versus 87.28 percent for the MOD02 250-meter NDVI). In contrast, the USFS aerial sketch map of gypsy moth defoliation showed a lower overall classification accuracy at 73.64 percent. The overall classification Kappa values were also similar for the VIIRS (approximately 0.67 Kappa) versus the MOD02 (approximately 0.72 Kappa) automated defoliation detection product, which were much higher than the values exhibited by the USFS sketch map product (overall Kappa of approximately 0.47). The report provides additional details on the accuracy of automated gypsy moth defoliation detection products compared with USFS sketch maps. The results suggest that VIIRS data can be effectively simulated from MODIS data and that VIIRS data will produce gypsy moth defoliation mapping products that are similar to MODIS-based products. The results of the RPC experiment indicate that VIIRS and MODIS data products have good potential for integration into the forest threat EWS. The accuracy assessment was performed only for 2001 because of time constraints and a relative scarcity of cloud-free Landsat and ASTER data for the peak defoliation period of the other years in the 2000-2006 time series. Additional work should be performed to assess the accuracy of gypsy moth defoliation detection products for additional years.The study area (mid-Appalachian highlands) and application (gypsy moth forest defoliation) are not necessarily representative of all forested regions and of all forest threat disturbance agents. Additional work should be performed on other inland and coastal regions as well as for other major forest threats.

Spruce, Joseph P.↗