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Atlantic salmon (Salmo salar) is a species of anadromous fish that was historically prevalent throughout the New England region. Overfishing and habitat loss caused a severe decline in the salmon population, restricting North America’s remaining wild Atlantic salmon to rivers in Maine. Land use and land cover (LULC) change and factors associated with temperature and precipitation are important for understanding the suitability of freshwater habitat for juvenile salmon. In collaboration with the Maine Department of Marine Resources and the Downeast Salmon Federation, the team utilized NASA Earth observations to aid partners in understanding how these factors change in relation to critical salmon habitat. Landsat 5 Thematic Mapper (TM) and Landsat 8 Operational Land Imager (OLI) imagery was analyzed to assess changes in LULC between 1985 and 2021. Terra Moderate Resolution Imaging Spectroradiometer (MODIS) and Integrated Multi-satellite Retrievals for Global Precipitation Measurement (GPM IMERG) data were used to determine land surface temperature and precipitation, respectively; between 2000 and 2020. Lastly, temperature and precipitation anomaly maps visualized deviation from the 20-year climatic average for each pixel. LULC analysis for 1985 to 2020 showed a loss of forest cover throughout critical salmon habitat although gains in forested area were also observed. Assessment of mean summer land surface temperature revealed an increase in temperature from 2000 to 2020 and anomaly maps highlighted areas experiencing abnormally high or low summer precipitation and temperature. These results and the underlying data were packaged for the partner organizations to inform future conservation efforts.
Short episodic high temperature events can be lethal for migrating adult Pacific salmon (Oncorhynchus spp.). We downscaled temperatures for the Fraser River, British Columbia to evaluate the impact of climate warming on the frequency of exceeding thermal thresholds associated with salmon migratory success. Alarmingly, a modest 1.0 C increase in average summer water temperature over 100 years (1981-2000 to 2081-2100) tripled the number of days per year exceeding critical salmonid thermal thresholds (i.e. 19.0 C). Refined thresholds for two populations (Gates Creek and Weaver Creek) of sockeye salmon (Oncorhynchus nerka) were defined using physiological constraint models based on aerobic scope. While extreme temperatures leading to complete aerobic collapse remained unlikely under our warming scenario, both populations were increasingly forced to migrate upriver at reduced levels of aerobic performance (e.g. in 80% of future simulations, => 90% of salmon encountered temperatures exceeding population specific thermal optima for maximum aerobic scope; T(sub opt)) = 16.3 C for Gates Creek and T(sub sopt)=14.5 C for Weaver Creek). Assuming recent changes to river entry timing persist, we also predicted dramatic increases in the probability of freshwater mortality for Weaver Creek salmon due to reductions in aerobic, and general physiological, performance (e.g. in 42% of future simulations =>50% of Weaver Creek fish exceeded temperature thresholds associated with 0 - 60% of maximum aerobic scope). Potential for adaptation via directional selection on run-timing was more evident for the Weaver Creek population. Early entry Weaver Creek fish experienced 25% (range: 15 - 31%) more suboptimal temperatures than late entrants, compared with an 8% difference (range: 0 - 17%) between early and late Gates Creek fish. Our results emphasize the need to consider daily temperature variability in association with population-specific differences in behaviour and physiological constraints when forecasting impacts of climate change on migratory survival of aquatic species.
Major declines in Atlantic salmon (Salmo salar) populations have occurred alongside dam construction, shifting temperatures, and changing land use and land cover (LULC), restricting the last remaining wild population in the United States to Maine. In collaboration with the Maine Department of Marine Resources and the Downeast Salmon Federation, the NASA DEVELOP team utilized Earth observations to assess changes within critical salmon habitat. The team used the Landsat 5 Thematic Mapper (TM), Landsat 8 Operation Land Imager (OLI), Sentinel-2 MultiSpectral Instrument (MSI), and National Land Cover Database (NLCD) to refine historical LULC maps from 1985 to 2021. The team also used elevation data from the Shuttle Radar Topography Mission (SRTM) and IDRISI TerrSet Land Change Modeler to forecast LULC change to 2040. From Terra Moderate Resolution Imaging Spectroradiometer (MODIS) land surface temperature (LST) data, the team derived a time series, summer averages, and anomaly maps between 2000 and 2021. The team analyzed LST in relation to LULC classes, specifically forest cover type, and in-situ stream temperature from the Spatial Hydro-Ecological Decision System (EcoSHEDS). LULC trends from 1985 to 2021 revealed a net transition of coniferous forest to other classes, such as deciduous forest and developed land. The team found an association between warmer temperatures and a greater presence of developed and mixed forest classes per 10,000 acres across Maine. These visualizations and analyses will aid partners in identifying riparian locations with ideal or unfavorable habitat conditions to inform Atlantic salmon population recovery efforts.
Shifting patterns in land use and land cover (LULC), temperature, and precipitation have exacerbated a rapid decline in Federally Endangered wild Atlantic salmon (Salmo salar) populations. The team at NASA DEVELOP partnered with the Maine Department of Marine Resources (DMR) and the Downeast Salmon Federation (DSF) to create a comprehensive workshop designed to demonstrate the applicability of Earth observations in examining these threats using the Penobscot, Union, and Machias Rivers as case studies. This entailed curating tutorials for acquiring and analyzing satellite data using Google Earth Engine, EarthExplorer, and Earthdata. The team demonstrated how to classify LULC in ArcGIS Pro from 1985 until 2021 using Landsat 5 Thematic Mapper (TM), Landsat 8 Operation Land Imager (OLI), Sentinel-2 MultiSpectral Instrument (MSI), and datasets from the United Stated Geological Survey (USGS) National Land Cover Database (NLCD), showing an overall transition from coniferous forests to other LULC classes. The team also demonstrated how to use historical data from Terra Moderate Resolution Imaging Spectroradiometer (MODIS) and Integrated Multi-satellite Retrievals for Global Precipitation Measurement (GPM IMERG) to generate 2021 land surface temperature (LST) and precipitation maps, respectively, showing that Maine was abnormally dry during the summer in an increasingly warm region. These workshop materials will aid the partners in integrating NASA Earth observations into their future salmon habitat restoration initiatives.
Changes in temperature and precipitation patterns, along with alterations in land cover threaten ongoing conservation efforts for Federally Endangered Atlantic salmon (Salmo salar) in Maine. Earth observation data offers a unique perspective for habitat monitoring that can complement habitat restoration and conservation activity on the ground. As a dual capacity building program, the NASA DEVELOP National Program strives to build the capacity of program participants by leveraging Earth observation data to address environmental concerns across the globe, while also building capacity in partner organizations to integrate Earth observation data into their decision making practices. Between September 2021 and August 2022, three NASA DEVELOP teams demonstrated the feasibility of utilizing NASA Earth observations including Aqua Moderate Resolution Imaging Spectroradiometer (MODIS), Terra MODIS, Landsat 5 Thematic Mapper (TM), Landsat 8 Operation Land Imager (OLI), and Shuttle Radar Topography Mission (SRTM) in conjunction with Sentinel-2 MultiSpectral Instrument (MSI) to assess temperature, precipitation, and land use land cover (LULC) over time throughout salmon habitat in Maine. While the first two teams completed projects that were categorized as NASA DEVELOP’s traditional feasibility projects, the third and final project team generated resources and planned an interactive workshop to transfer project methods to end-user organizations. Ultimately, the goal of this work was to not only inform the partner’s ongoing salmon population recovery and habitat restoration initiatives but provide tools that allow partner organizations to continue integrating Earth observation data into their work beyond their partnership with the program. This project serves as a case study within the NASA DEVELOP Program and provides lessons learned for moving beyond traditional feasibility studies to more interactive partner engagement and knowledge transfer practices.
Reactivity of deoxyribonucleic acid /DNA/ with antibody showing that salmon sperm DNA reacts with antipurinoyl antibody with or without heat denaturation
The antenna and transmitter described in this report were designed for integration into the remote acoustic assessment system for detection of sockeye salmon in the Bristol Bay region of the Bering Sea. The assessment system configuration consists of an upward directed sonar buoy anchored 150 ft below the surface and attached by cable to a spar buoy tethered some 300 ft laterally. The spar buoy contains a telemetry transmitter, power supply, data processing electronics, an antenna and a beacon light.
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Unusually high flows in the Columbia River in 2011 raised total dissolved gas (TDG) levels in the river above the 120 percent legal limit imposed to prevent harmful impacts to aquatic organisms. This provided a unique opportunity to evaluate the effect on smolt survival. In-river (IR) migrating juvenile yearling Chinook released at Bonneville Dam with acoustic tags during periods when TDG exceeded 120 percent received estimated maximum exposures of 134 TDG. Subsequent daily survival rates in the lower river and plume were reduced by 0.06 per day (SE equals 0.01) and 0.15 per day (SE equals 0.05) relative to IR migrant fish released when TDG was less than 120 percent. Transported smolts (T) released 10-13 kilometers below Bonneville Dam had lower maximum exposure levels (126 percent) and experienced no difference in daily survival rates relative to unexposed smolts. River temperature levels and trends in turbidity and disease prevalence between releases of high and low exposure smolts were not consistent with the observed effects on survival rates. We conclude that smolts may suffer from chronic effects of elevated TDG exposure while migrating through the Columbia River and plume. Consideration should be given to measuring these survival losses in an explicit experimental framework that isolates possible confounding factors.
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A recently developed semianalytic Monte Carlo radiative transfer model applicable to oceanographic lidar systems (SALMON) has been used to simulate a series of laboratory experiments studying the backscatter of laser light from dispersions of Teflon spheres. Results obtained with SALMON, using best estimates of pertinent optical parameters, compared quite well with experimental data in both a qualitative and quantitative sense, with the largest relative discrepancies being approximately 30%. The results firmly establish the validity of SALMON in studying the performance of real oceanographic lidar systems.
A semi-analytic Monte Carlo simulation methodology (SALMON) was discussed. This simulation technique is particularly well suited for addressing fundamental radiative transfer problems in oceanographic LIDAR (optical radar), and also provides a framework for investigating the effects of environmental factors on LIDAR system performance. The simulation model was extended for airborne laser fluorosensors to allow for inhomogeneities in the vertical distribution of constituents in clear sea water. Results of the simulations for linearly varying step concentrations of chlorophyll are presented. The SALMON technique was also employed to determine how the LIDAR signals from an inhomogeneous media differ from those from homogeneous media.
Childhood obesity is a serious global public health concern (WHO, 2015; Wang Y & Lobstein T, 2006). Low self-esteem and related mental health problems are common in obese children (Strauss RS, 2000) as well as poor academic performance and career development (Gurley-Calvez T, 2010).Westernized dietary habits and sedentary lifestyles are identified as the major risk factors of current alarming rate of obesity along with genetic susceptibility (Popkin BM, 1999). Children in many countries, including South Korea, have become increasingly sedentary due to urbanization changes in their respective societies (Ng SW, et al. 2009, Salmon J et al. 2011). In particular, South Korea had abundant dissemination of mobile technology, such as tablet and smart phone devices. Children have become reliant on mobile devices and are less likely to perform physical activities (Do, et al, 2013). Effective and sustainable intervention programs are needed to fight the global obesity epidemic (IOM, 2012; Wang Y et al, 2013; Wang Y et al, 2015). Previous studies suggested focus on prevention strategies that begin in early childhood, a period when children establish their life habits. (Salmon J et al. 2011). Recent systematic reviews and meta-analysis including ours found that obesity prevention programs for young children have a greater intervention effect (Waters E, et al, 2011; Wang Y et al, 2013; Wang Y et al, 2015). The NASA Mission X: Train Like an Astronaut (MX) program was developed to promote children's exercise and healthy eating with excitement for training like an astronaut (Lloyd C, 2012).At present, the NASA MX Program covered 28 countries, enrolled children through their teachers in school setting (MX report 2014, 2015). This pilot study adapted the NASA MX intervention program for young children in South Korea. We assessed its feasibility and effectiveness in promoting physical activity (PA) in children and in improving parents' perspectives. We also examined the status of PA in young children. More than 80% of five-year-old children go to a Kindergarten or day care center in South Korea (MH Suh et al, 2013).Thus, reaching young children through child care and education settings could be a good approach for early childhood obesity prevention.
We describe and model the evolution of a recent landslide, tsunami, outburst flood, and sediment plume in the southern Coast Mountains, British Columbia, Canada. On November 28, 2020, about 18 million m3 of rock descended 1,000 m from a steep valley wall and traveled across the toe of a glacier before entering a 0.6 km2 glacier lake and producing >100-m high run-up. Water overtopped the lake outlet and scoured a 10-km long channel before depositing debris on a 2-km2 fan below the lake outlet. Floodwater, organic debris, and fine sediment entered a fjord where it produced a 60+km long sediment plume and altered turbidity, water temperature, and water chemistry for weeks. The outburst flood destroyed forest and salmon spawning habitat. Physically based models of the landslide, tsunami, and flood provide real-time simulations of the event and can improve understanding of similar hazard cascades and the risk they pose. Plain Language Summary Glacier retreat exposes unstable slopes that can suddenly fail. We describe and model one such event with far-reaching consequences. The landslide mass (50 million tonnes, equivalent to the combined mass of all Canadian automobiles) entered and suddenly drained a 0.6-km2 alpine lake in the southern Coast Mountains of British Columbia. Displaced water destroyed salmon-spawning habitat over a distance of 8.5 km and created a plume of sediment and organic matter more than 60 km from the head of the fjord into which the floodwaters discharged. Physically based models are able to simulate the hazard cascade, and such models could be used to improve hazard and risk assessments of these events under future climate change.
Streptonigrin interaction with DNA and resulting degradation and denaturation temperature of DNA FROM salmon sperm and Escherichia coli