Coding System Design for Advanced Solar Missions Interim Report
Core sequential decoding program for advanced solar missions
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Effect of land use change on the carbon cycle in Amazon soils
The overall goal of this study was to provide a quantitative understanding of the cycling of carbon in the soils associated with deep-rooting Amazon forests. In particular, we wished to apply the understanding gained by answering two questions: (1) what changes will accompany the major land use change in this region, the conversion of forest to pasture? and (2) what is the role of carbon stored deeper than one meter in depth in these soils? To construct carbon budgets for pasture and forest soils we combined the following: measurements of carbon stocks in above-ground vegetation, root biomass, detritus, and soil organic matter; rates of carbon inputs to soil and detrital layers using litterfall collection and sequential coring to estimate fine root turnover; C-14 analyses of fractionated SOM and soil CO2 to estimate residence times; C-13 analyses to estimate C inputs to pasture soils from C-4 grasses; soil pCO2, volumetric water content, and radon gradients to estimate CO2 production as a function of soil depth; soil respiration to estimate total C outputs; and a model of soil C dynamics that defines SOM fractions cycling on annual, decadal, and millennial time scales.
Trumbore, Susan E.↗
The evolution of complex type B Allende inclusion - An ion microprobe trace element study
Results are presented of a detailed trace-element and isotopic analyses of the constituent phases in each of the major textural parts (mantle, core, and islands) of a Type B refractory inclusion, the USNM 5241 inclusion from Allende, first described by El Goresy et al. (1985). The REE data on 5241 were found to be largely consistent with a model in which the mantle and the core of 5241 formed sequentially out of a single melt by fractional crystallization. The numerical models of REE evolution in the 5241 melt, especially that of Eu, require that a significant mass of spinel-free island material was assimilated into the evolving melt during the last half of the solidification history of 5241. The trace element results pbtained thus strongly support the interpretation of El Goresy et al. (1985) that the spinel-free islands in the 5241 are trapped xenoliths.
Macpherson, Glenn J.↗
SequenceL: Automated Parallel Algorithms Derived from CSP-NT Computational Laws
With the introduction of new parallel architectures like the cell and multicore chips from IBM, Intel, AMD, and ARM, as well as the petascale processing available for highend computing, a larger number of programmers will need to write parallel codes. Adding the parallel control structure to the sequence, selection, and iterative control constructs increases the complexity of code development, which often results in increased development costs and decreased reliability. SequenceL is a high-level programming language that is, a programming language that is closer to a human s way of thinking than to a machine s. Historically, high-level languages have resulted in decreased development costs and increased reliability, at the expense of performance. In recent applications at JSC and in industry, SequenceL has demonstrated the usual advantages of high-level programming in terms of low cost and high reliability. SequenceL programs, however, have run at speeds typically comparable with, and in many cases faster than, their counterparts written in C and C++ when run on single-core processors. Moreover, SequenceL is able to generate parallel executables automatically for multicore hardware, gaining parallel speedups without any extra effort from the programmer beyond what is required to write the sequen tial/singlecore code. A SequenceL-to-C++ translator has been developed that automatically renders readable multithreaded C++ from a combination of a SequenceL program and sample data input. The SequenceL language is based on two fundamental computational laws, Consume-Simplify- Produce (CSP) and Normalize-Trans - pose (NT), which enable it to automate the creation of parallel algorithms from high-level code that has no annotations of parallelism whatsoever. In our anecdotal experience, SequenceL development has been in every case less costly than development of the same algorithm in sequential (that is, single-core, single process) C or C++, and an order of magnitude less costly than development of comparable parallel code. Moreover, SequenceL not only automatically parallelizes the code, but since it is based on CSP-NT, it is provably race free, thus eliminating the largest quality challenge the parallelized software developer faces.
Cooke, Daniel↗
Application of Sequential Quadratic Programming to Minimize Smart Active Flap Rotor Hub Loads
In an analytical study, SMART active flap rotor hub loads have been minimized using nonlinear programming constrained optimization methodology. The recently developed NLPQLP system (Schittkowski, 2010) that employs Sequential Quadratic Programming (SQP) as its core algorithm was embedded into a driver code (NLP10x10) specifically designed to minimize active flap rotor hub loads (Leyland, 2014). Three types of practical constraints on the flap deflections have been considered. To validate the current application, two other optimization methods have been used: i) the standard, linear unconstrained method, and ii) the nonlinear Generalized Reduced Gradient (GRG) method with constraints. The new software code NLP10x10 has been systematically checked out. It has been verified that NLP10x10 is functioning as desired. The following are briefly covered in this paper: relevant optimization theory; implementation of the capability of minimizing a metric of all, or a subset, of the hub loads as well as the capability of using all, or a subset, of the flap harmonics; and finally, solutions for the SMART rotor. The eventual goal is to implement NLP10x10 in a real-time wind tunnel environment.
HUB LOADS↗
Irregularities in the secular variation and geodynamic implications; Proceedings of the Session, Cincinnati, OH, May 17, 1984
Consideration is given to: variations in the Gauss coefficients of the geomagnetic potential over the last several hundred years; eccentric geomagnetic dipole drift; and evidence for geomagnetic jerks from 1931 to 1971. Among other topics discussed are: models of the geomagnetic field in western Europe from 1960 to 1980; the external and internal parts of the geomagnetic jerk of 1970; secular variation of the magnetic mean energy density at the source layer depth; and motions at the core surface in the geostrophic approximation. Consideration is also given to: the unpredictability of geomagnetic secular variation; the use of short-term core-mantle coupling and geomagnetic variation impulses as Lagrangian tracers of core motions; and a comparison of two sequential geomagnetic polarity transitions in the upper Olduvai and the lower Jarmillio in the Southern Hemisphere.
Taylor, P.↗
X10: A FORTRAN direct access data management system
The XIO system is a set of subroutines that provide generalized data management capability for FORTRAN programs using a direct access file. Arrays of integer, real, double precision, and character data may be stored, each logical group of data identified by a unique matrix number. A matrix may be organized and stored as batches to reduce core requirements. Batches may be accessed randomly or sequentially. The file may be checkpointed and retained, allowing for restarts with stored values. The XIO subroutines operate on either IBM 360-370/OS/VS or DEC PDP-11/RSX computing systems.
Roland, D. P.↗
Energy storage and deposition in a solar flare
X-ray pictures of a solar flare taken with the S-056 X-ray telescope aboard Skylab are interpreted in terms of flare energy deposition and storage. The close similarity between calculated magnetic-field lines and the overall structure of the X-ray core is shown to suggest that the flare occurred in an entire arcade of loops. It is found that different X-ray features brightened sequentially as the flare evolved, indicating that some triggering disturbance moved from one side to the other in the flare core. A propagation velocity of 180 to 280 km/s is computed, and it is proposed that the geometry of the loop arcade strongly influenced the propagation of the triggering disturbance as well as the storage and site of the subsequent energy deposition. Some possible physical causes for the sequential X-ray brightening are examined, and a magnetosonic wave is suggested as the triggering disturbance. 'Correct' conditions for energy release are considered
Vorpahl, J. A.↗
A Simple GPU-Accelerated Two-Dimensional MUSCL-Hancock Solver for Ideal Magnetohydrodynamics
We describe our experience using NVIDIA's CUDA (Compute Unified Device Architecture) C programming environment to implement a two-dimensional second-order MUSCL-Hancock ideal magnetohydrodynamics (MHD) solver on a GTX 480 Graphics Processing Unit (GPU). Taking a simple approach in which the MHD variables are stored exclusively in the global memory of the GTX 480 and accessed in a cache-friendly manner (without further optimizing memory access by, for example, staging data in the GPU's faster shared memory), we achieved a maximum speed-up of approx. = 126 for a sq 1024 grid relative to the sequential C code running on a single Intel Nehalem (2.8 GHz) core. This speedup is consistent with simple estimates based on the known floating point performance, memory throughput and parallel processing capacity of the GTX 480.
graphics processing units↗
The triggering and subsequent development of a solar flare
A solar flare which occurred on Sept. 5, 1973, is discussed on the basis of high temporal and spatial resolution pictures taken with the Skylab S-056 X-ray telescope. The temporal evolution of the flare is outlined, and magnetic-field data for the active region are compared with the soft X-ray observations. A close similarity between calculated magnetic-field lines and the overall structure of the X-ray core is shown to suggest that the flare occurred in an entire arcade of loops rather than in a single loop. Sequential brightening of different X-ray features is taken as an indication that some triggering disturbance moved from one side to the other in the flare core at velocities of 180 to 280 km/s. The two most intense X-ray features were found in places where the magnetic field composing the arcade had a small radius of curvature with horizontal field gradients higher than the surrounding area and where the axis of the arcade changed direction. It is suggested that a magetosonic wave triggered the energy releases as it propagated down the arcade and steepened the field gradients
Vorpahl, J. A.↗
Constraining Numerical Geodynamo Modeling with Surface Observations
Numerical dynamo solutions have traditionally been generated entirely by a set of self-consistent differential equations that govern the spatial-temporal variation of the magnetic field, velocity field and other fields related to dynamo processes. In particular, those solutions are obtained with parameters very different from those appropriate for the Earth s core. Geophysical application of the numerical results therefore depends on correct understanding of the differences (errors) between the model outputs and the true states (truth) in the outer core. Part of the truth can be observed at the surface in the form of poloidal magnetic field. To understand these differences, or errors, we generate new initial model state (analysis) by assimilating sequentially the model outputs with the surface geomagnetic observations using an optimal interpolation scheme. The time evolution of the core state is then controlled by our MoSST core dynamics model. The final outputs (forecasts) are then compared with the surface observations as a means to test the success of the assimilation. We use the surface geomagnetic data back to year 1900 for our studies, with 5-year forecast and 20-year analysis periods. We intend to use the result; to understand time variation of the errors with the assimilation sequences, and the impact of the assimilation on other unobservable quantities, such as the toroidal field and the fluid velocity in the core.
Kuang, Weijia↗
Symbolic Analysis of Concurrent Programs with Polymorphism
The current trend of multi-core and multi-processor computing is causing a paradigm shift from inherently sequential to highly concurrent and parallel applications. Certain thread interleavings, data input values, or combinations of both often cause errors in the system. Systematic verification techniques such as explicit state model checking and symbolic execution are extensively used to detect errors in such systems [7, 9]. Explicit state model checking enumerates possible thread schedules and input data values of a program in order to check for errors [3, 9]. To partially mitigate the state space explosion from data input values, symbolic execution techniques substitute data input values with symbolic values [5, 7, 6]. Explicit state model checking and symbolic execution techniques used in conjunction with exhaustive search techniques such as depth-first search are unable to detect errors in medium to large-sized concurrent programs because the number of behaviors caused by data and thread non-determinism is extremely large. We present an overview of abstraction-guided symbolic execution for concurrent programs that detects errors manifested by a combination of thread schedules and data values [8]. The technique generates a set of key program locations relevant in testing the reachability of the target locations. The symbolic execution is then guided along these locations in an attempt to generate a feasible execution path to the error state. This allows the execution to focus in parts of the behavior space more likely to contain an error.
Rungta, Neha Shyam↗
On optimal nonlinear estimation. I - Continuous observation.
A generalization of Bucy's (1965) representation theorem is obtained under very weak hypotheses. The generalized theorem is shown to play the same role in the case of general optimal estimation for an arbitrary random process as does the Bucy theorem in the case of optimal filtering for a diffusion process. At least for the models considered, the possibility is pointed out to reduce all sequential estimation problems to the problem of filtering. Hence, filtering theory is seen to represent the core of estimation theory, and is believed to define the direction in which future research should be focused.
Lo, J. T.↗
The role of the equivalent blackbody temperature in the study of Atlantic Ocean tropical cyclones
Satellite measured equivalent blackbody temperatures of Atlantic Ocean tropical cyclones are used to investigate their role in describing the convection and cloud patterns of the storms and in predicting wind intensity. The high temporal resolution of the equivalent blackbody temperature measurements afforded with the geosynchronous satellite provided sequential quantitative measurements of the tropical cyclone which reveal a diurnal pattern of convection at the inner core during the early developmental stage; a diurnal pattern of cloudiness in the storm's outer circulation throughout the life cycle; a semidiurnal pattern of cloudiness in the environmental atmosphere surrounding the storms during the weak storm stage; an outward modulating atmospheric wave originating at the inner core; and long term convective bursts at the inner core prior to wind intensification.
Steranka, J.↗
Atmospheric reentry of the in-core thermionic SP-100 reactor system
Presumed end-of-life atmospheric reentry of the GA SP-100 system was studied to assess dispersal feasibility and associated hazards. Reentry was studied by sequential use of an orbital trajectory and a heat analysis computer program. Two heating models were used. The first model assumed a thermal equilibrium condition between the stagnation point aerodynamic heating and the radiative cooling of the skin material surface. The second model allowed for infinite conductivity of the skin material. Four reentering configurations were studied representing stages of increased SP-100 breakup: (1) radiator, shield and reactor, (2) shield and reactor, (3) reactor with control drums, and (4) reactor without control drums. Each reentering configuration was started from a circular orbit at 116 km having an inertial velocity near Mach 25. The assumed failing criterion was the attainment of melting temperature of a critical system component. The reentry analysis revealed breakup of the vessel in the neighborhood of 61 km altitude and scattering of the fuel elements. Subsequent breakup of the fuel elements was not predicted. Oxidation of the niobium skin material was calculated to cause an increase in surface temperature of less than ten percent. The concept of thermite analogs for enhancing reactor reentry dispersal was assessed and found to be feasible in principle. A conservative worst-case hazards analysis was performed for radioactive and nonradioactive toxic SP-100 materials assumed to be dispersed during end-of-life reentry. The hazards associated with this phase of the SP-100 mission were calculated to be insignificant.
Stamatelatos, M. G.↗
DSN Beowulf Cluster-Based VLBI Correlator
The NASA Deep Space Network (DSN) requires a broadband VLBI (very long baseline interferometry) correlator to process data routinely taken as part of the VLBI source Catalogue Maintenance and Enhancement task (CAT M&E) and the Time and Earth Motion Precision Observations task (TEMPO). The data provided by these measurements are a crucial ingredient in the formation of precision deep-space navigation models. In addition, a VLBI correlator is needed to provide support for other VLBI related activities for both internal and external customers. The JPL VLBI Correlator (JVC) was designed, developed, and delivered to the DSN as a successor to the legacy Block II Correlator. The JVC is a full-capability VLBI correlator that uses software processes running on multiple computers to cross-correlate two-antenna broadband noise data. Components of this new system (see Figure 1) consist of Linux PCs integrated into a Beowulf Cluster, an existing Mark5 data storage system, a RAID array, an existing software correlator package (SoftC) originally developed for Delta DOR Navigation processing, and various custom- developed software processes and scripts. Parallel processing on the JVC is achieved by assigning slave nodes of the Beowulf cluster to process separate scans in parallel until all scans have been processed. Due to the single stream sequential playback of the Mark5 data, some ramp-up time is required before all nodes can have access to required scan data. Core functions of each processing step are accomplished using optimized C programs. The coordination and execution of these programs across the cluster is accomplished using Pearl scripts, PostgreSQL commands, and a handful of miscellaneous system utilities. Mark5 data modules are loaded on Mark5 Data systems playback units, one per station. Data processing is started when the operator scans the Mark5 systems and runs a script that reads various configuration files and then creates an experiment-dependent status database used to delegate parallel tasks between nodes and storage areas (see Figure 2). This script forks into three processes: extract, translate, and correlate. Each of these processes iterates on available scan data and updates the status database as the work for each scan is completed. The extract process coordinates and monitors the transfer of data from each of the Mark5s to the Beowulf RAID storage systems. The translate process monitors and executes the data conversion processes on available scan files, and writes the translated files to the slave nodes. The correlate process monitors the execution of SoftC correlation processes on the slave nodes for scans that have completed translation. A comparison of the JVC and the legacy Block II correlator outputs reveals they are well within a formal error, and that the data are comparable with respect to their use in flight navigation. The processing speed of the JVC is improved over the Block II correlator by a factor of 4, largely due to the elimination of the reel-to-reel tape drives used in the Block II correlator.
Rogstad, Stephen P.↗
A fast, uncoupled, compressible, two-dimensional, unsteady boundary layer algorithm with separation for engine inlets
A finite difference boundary layer algorithm was developed to model viscous effects when an inviscid core flow solution is given. This algorithm solved each boundary layer equation separately, then iterated to find a solution. Solving the boundary layer equations sequentially was 2.4 to 4.0 times faster than solving the boundary layer equations simultaneously. This algorithm used a modified Baldwin-Lomax turbulence model, a weighted average of forward and backward differencing of the pressure gradient, and a backward sweep of the pressure. With these modifications, the boundary layer algorithm was able to model flows with and without separation. The number of grid points used in the boundary layer algorithm affected the stability of the algorithm as well as the accuracy of the predictions of friction coefficients and momentum thicknesses. Results of this boundary layer algorithm compared well with experimental observations of friction coefficients and momentum thicknesses. In addition, when used interactively with an inviscid flow algorithm, this boundary layer algorithm corrected for viscous effects to give a good match with experimental observations for pressures in a supersonic inlet.
Roach, Robert L.↗
A fast, uncoupled, compressible, two-dimensional, unsteady boundary layer algorithm with separation for engine inlets
A finite difference boundary layer algorithm was developed to model viscous effects when an inviscid core flow solution is given. This algorithm solved each boundary layer equation separately, then iterated to find a solution. Solving the boundary layer equations sequentially was 2.4 to 4.0 times faster than solving the boundary layer equations simultaneously. This algorithm used a modified Baldwin-Lomax turbulence model, a weighted average of forward and backward differencing of the pressure gradient, and a backward sweep of the pressure. With these modifications, the boundary layer algorithm was able to model flows with and without separation. The number of grid points used in the boundary layer algorithm affected the stability of the algorithm affected the stability of the algorithm as well as the accuracy of the predictions of friction coefficients and momentum thicknesses. Results of this boundary layer algorithm compared well with experimental observations of friction coefficients and momentum thicknesses. In addition, when used interactively with an inviscid flow algorithm, this boundary layer algorithm corrected for viscous effects to give a good match with experimental observations for pressures in a supersonic inlet.
Roach, Robert L.↗