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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 19 records

Pair wave function symmetry in UTe2 from zero-energy surface state visualization

Although nodal spin-triplet topological superconductivity appears probable in uranium ditelluride (UTe 2 ), its superconductive order parameter Δ k remains unestablished. In theory, a distinctive identifier would be the existence of a superconductive topological surface band, which could facilitate zero-energy Andreev tunneling to an s-wave superconductor and also distinguish a chiral from a nonchiral Δ k through enhanced s-wave proximity. In this study, we used s-wave superconductive scan tips and detected intense zero-energy Andreev conductance at the UTe 2 (0-11) termination surface. Imaging revealed subgap quasiparticle scattering interference signatures with a-axis orientation. The observed zero-energy Andreev peak splitting with enhanced s-wave proximity signifies that Δ k of UTe 2 is a nonchiral state: B 1u , B 2u , or B 3u . However, if the quasiparticle scattering along the a axis is internodal, then a nonchiral B 3u state is the most consistent for UTe 2 .

Gu, Qiangqiang [Cornell Univ., Ithaca, NY (United ↗

Broken-Symmetry Density Functional Theory Analysis of the Ω Intermediate in Radical S -Adenosyl- l -methionine Enzymes: Evidence for a Near-Attack Conformer over an Organometallic Species

Radical S-adenosyl-L-methionine (SAM) enzymes are found in all domains of life and catalyze a wide range of biochemical reactions. Recently, an organometallic intermediate, Ω, has been experimentally implicated in the 5'-deoxyadenosyl radical generation mechanism of the radical SAM superfamily. In this work, we employ broken-symmetry density functional theory to evaluate several structural models of Ω. The results show that the calculated hyperfine coupling constants (HFCCs) for the proposed organometallic structure of Ω are inconsistent with the experiment. In contrast, a near-attack conformer of SAM bound to the catalytic [4Fe–4S] cluster, in which the distance between the unique iron and SAM sulfur is ~3 Å, yields HFCCs that are all within 1 MHz of the experimental values. Furthermore, these results clarify the structure of the ubiquitous Ω intermediate and suggest a paradigm shift reversal regarding the mechanism of SAM cleavage by members of the radical SAM superfamily.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Symmetry-mode analysis for local structure investigations using pair distribution function data

Symmetry-adapted distortion modes provide a natural way of describing distorted structures derived from higher-symmetry parent phases. Structural refinements using symmetry-mode amplitudes as fit variables have been used for at least ten years in Rietveld refinements of the average crystal structure from diffraction data; more recently, this approach has also been used for investigations of the local structure using real-space pair distribution function (PDF) data. Here, the value of performing symmetry-mode fits to PDF data is further demonstrated through the successful application of this method to two topical materials: TiSe2, where a subtle but long-range structural distortion driven by the formation of a charge-density wave is detected, and MnTe, where a large but highly localized structural distortion is characterized in terms of symmetry-lowering displacements of the Te atoms. Here, the analysis is performed using fully open-source code within the DiffPy framework via two packages developed for this work: isopydistort, which provides a scriptable interface to the ISODISTORT web application for group theoretical calculations, and isopytools, which converts the ISODISTORT output into a DiffPy-compatible format for subsequent fitting and analysis. These developments expand the potential impact of symmetry-adapted PDF analysis by enabling high-throughput analysis and removing the need for any commercial software.

36 MATERIALS SCIENCE↗

Derivation and application of the reciprocity relations for radiative transfer with internal illumination

A Green's function formulation is used to derive basic reciprocity relations for planar radiative transfer in a general medium with internal illumination. Reciprocity (or functional symmetry) allows an explicit and generalized development of the equivalence between source and probability functions. Assuming similar symmetry in three-dimensional space, a general relationship is derived between planar-source intensity and point-source total directional energy. These quantities are expressed in terms of standard (universal) functions associated with the planar medium, while all results are derived from the differential equation of radiative transfer.

Cogley, A. C.↗

Detection of translational noncrystallographic symmetry in Patterson functions

Detection of translational noncrystallographic symmetry (TNCS) can be critical for success in crystallographic phasing, particularly when molecular-replacement models are poor or anomalous phasing information is weak. If the correct TNCS is detected then expected intensity factors for each reflection can be refined, so that the maximum-likelihood functions underlying molecular replacement and single-wavelength anomalous dispersion use appropriate structure-factor normalization and variance terms. Here, an analysis of a curated database of protein structures from the Protein Data Bank to investigate how TNCS manifests in the Patterson function is described. These studies informed an algorithm for the detection of TNCS, which includes a method for detecting the number of vectors involved in any commensurate modulation (the TNCS order). The algorithm generates a ranked list of possible TNCS associations in the asymmetric unit for exploration during structure solution.

59 BASIC BIOLOGICAL SCIENCES↗

Tensor renormalization group approach to the $O(2)$ models via symmetry-twisted partition functions

We investigate critical phenomena in the $O(2)$ models using symmetry-twisted partition functions that can be efficiently computed within the tensor renormalization group framework. We first demonstrate, taking the three-dimensional model as an example, that symmetry-twisted partition functions detect the spontaneous breaking of global continuous symmetry. We then consider the same model in two dimensions, where the Berezinskii--Kosterlitz--Thouless (BKT) transition occurs. Since symmetry-twisted partition functions directly provide the helicity modulus at a finite twist angle, we determine the BKT transition point. These results are presented based on Ref.~\cite{Akiyama:2026dzg}. Finally, in addition to the original paper~\cite{Akiyama:2026dzg}, we apply this approach to the two-dimensional generalized $O(2)$ model and confirm that it successfully identifies the phase transitions between the ferromagnetic and nematic phases, as well as between the nematic and paramagnetic phases.

Akiyama, Shinichiro [Tsukuba U., CCS; Tokyo U., IC↗

Tensor renormalization group approach to critical phenomena via symmetry-twisted partition functions

The locality of field theories strongly constrains the possible behaviors of symmetry-twisted partition functions, and thus they serve as order parameters to detect low-energy realizations of global symmetries, such as spontaneous symmetry breaking (SSB). We demonstrate that the tensor renormalization group (TRG) offers an efficient framework to compute the symmetry-twisted partition functions, which enables us to detect the symmetry-breaking transition and also to study associated critical phenomena. As concrete examples of SSB, we investigate the two-dimensional (2D) classical Ising model and the three-dimensional (3D) classical 𝑂⁡(2) nonlinear sigma model, and we identify their critical points solely from the twisted partition function. By employing the finite-size scaling argument, we find the critical temperature 𝑇 𝑐 = 2.2017⁢(2) with the critical exponent 𝜈 = 0.663⁢(33) for the 3D 𝑂⁡(2) model. In addition, we also study the Berezinskii–Kosterlitz–Thouless (BKT) criticality of the 2D classical 𝑂⁡(2) model by extracting the helicity modulus from the twisted partition functions, and we obtain the BKT transition temperature, 𝑇 BKT = 0.8928⁢(2).

lattice field theory↗

Genome integrity sensing by the broad-spectrum Hachiman antiphage defense complex

Hachiman is a broad-spectrum antiphage defense system of unknown function. We show here that Hachiman is a heterodimeric nuclease-helicase complex, HamAB. HamA, previously a protein of unknown function, is the effector nuclease. HamB is the sensor helicase. HamB constrains HamA activity during surveillance of intact double-stranded DNA (dsDNA). When the HamAB complex detects DNA damage, HamB helicase activity activates HamA, unleashing nuclease activity. Hachiman activation degrades all DNA in the cell, creating "phantom" cells devoid of both phage and host DNA. We demonstrate Hachiman activation in the absence of phage by treatment with DNA-damaging agents, suggesting that Hachiman responds to aberrant DNA states. Phylogenetic similarities between the Hachiman helicase and enzymes from eukaryotes and archaea suggest deep functional symmetries with other important helicases across domains of life.

59 BASIC BIOLOGICAL SCIENCES↗

PANNA: Properties from Artificial Neural Network Architectures

We report prediction of material properties from first principles is often a computationally expensive task. Recently, artificial neural networks and other machine learning approaches have been successfully employed to obtain accurate models at a low computational cost by leveraging existing example data. Here, we present a software package “Properties from Artificial Neural Network Architectures” (PANNA) that provides a comprehensive toolkit for creating neural network models for atomistic systems following the Behler–Parrinello topology. Besides the core routines for neural network training, it includes data parser, descriptor builder for Behler–Parrinello class of symmetry functions and force-field generator suitable for integration within molecular dynamics packages. PANNA offers a variety of activation and cost functions, regularization methods, as well as the possibility of using fully-connected networks with custom size for each atomic species. PANNA benefits from the optimization and hardware-flexibility of the underlying TensorFlow engine which allows it to be used on multiple CPU/GPU/TPU systems, making it possible to develop and optimize neural network models based on large datasets.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Connectivity-Dependent Exciton–Phonon Coupling in Cesium Bismuth Halide Quantum Dots

Metal halide octahedra form the fundamental functional building blocks of metal halide perovskites, dictating their structures, optical properties, electronic structures, and dynamics. Here, in this study, we show that the connectivity of bismuth halide octahedra in Cs 3 Bi 2 Br 9 and Cs 3 Bi 2 I 9 quantum dots (QDs) changes with different halide elements. We use first-principles calculations to reveal the key role of the connectivity of bismuth halide octahedra on the wave function symmetry, Huang-Rhys factor, and exciton-phonon interaction strength. Following QD synthesis via a ligand-mediated transport method, the effect of connectivity is verified with transient absorption spectroscopy, where we contrast Cs 3 Bi 2 Br 9 and Cs 3 Bi 2 I 9 QD exciton dynamics. In photoexcited Cs 3 Bi 2 I 9 QDs, phonons related to the vibrational motions of face-sharing [BiI 6 ] 3- bioctahedra couple strongly to the electronic state and drive rapid carrier relaxation. Equivalent signals are not observed for photoexcited Cs 3 Bi 2 Br 9 QDs, implying a lack of phonon involvement in band-edge absorption and subsequent exciton relaxation. Our findings suggest that structural engineering can effectively tune the exciton-phonon coupling and therefore influence exciton relaxation and recombination in perovskite nanomaterials.

TDDFT↗

Ellipsometry: dielectric functions of anisotropic crystals and symmetry

The optical functions of anisotropic materials can be determined using generalized ellipsometry, which can measure the cross-polarization coefficients (CPs) of the sample surface reflections. These CPs have several symmetry relations with respect to the symmetry of the crystal. This paper explores the symmetry relations of these CPs for uniaxial, orthorhombic, and monoclinic crystals and the requirements for generalized ellipsometry. Several ellipsometry measurement configurations are examined, including the requirements for the accurate measurements of the dielectric functions of anisotropic crystals.

Jellison, Gerald E.↗

Fission of 240 Pu with Symmetry-Restored Density Functional Theory

Nuclear fission plays an important role in fundamental and applied science, from astrophysics to nuclear engineering, yet it remains a major challenge to nuclear theory. Theoretical methods used so far to compute fission observables rely on symmetry-breaking schemes where basic information on the number of particles, angular momentum, and parity of the fissioning nucleus is lost. In this letter, we analyze the impact of restoring broken symmetries in the benchmark case of 240 Pu.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Correct symmetry in density functional theory calculations of δ-Pu [Slides]

Density functional theory (DFT) calculations in the delta-phase of Pu have long relied on the antiferromagnetic (AFM) spin structure to approximate the material’s unique electronic structure. The resulting tetragonal distortion away from the correct cubic symmetry was believed to be a necessary consequence of allowing an ordered spin structure.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Localization in the SCAN meta-generalized gradient approximation functional leading to broken symmetry ground states for graphene and benzene

Density functional theory calculations play a central role in understanding chemical and solid-state systems. Progress depends on density functionals that accurately reproduce both energies, for thermochemistry, and properly describe ground states and other properties that are of interest. The Cr dimer, benzene and graphene are especially important benchmark systems for quantum chemistry and condensed matter physics. The Strongly Constrained and Appropriately Normed (SCAN) functional, which is an advanced meta-generalized gradient approximation functional that significantly improves molecular energies is shown to perform poorly for the Cr dimer. This is connected with its poor performance for itinerant solid-state magnets and is a consequence of over localization of electrons, thus illustrating an analogy between the Cr dimer and itinerant magnets. The Cr dimer is a notoriously difficult system for density functionals. However, we additionally find that SCAN predicts an incorrect symmetry broken ground state for 2D graphene and for the benzene molecule, which is surprising considering that ground states of these are known to be well described even by the simplest local density approximation. We show that SCAN overly favors localized spin polarized states, which is a serious deficiency of this approach. Thus, the challenge of finding density functionals that accurately treat both localized and delocalized electronic systems remains.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Auxiliary function approach for determining symmetry energy at suprasaturation densities

Nuclear symmetry energy E sym (ρ) at density ρ is normally expanded or simply parameterized as a function of χ = (ρ – ρ 0 )/3ρ 0 in the form of Esym(ρ) ≈ S + Lχ + 2 –1 K sym χ 2 + 6 –1 J sym χ 3 + … using its magnitude S, slope L, curvature K sym and skewness J sym at the saturation density ρ0 of nuclear matter. Much progress has been made in recent years in constraining especially the S and L parameters using various terrestrial experiments and astrophysical observations. Furthermore, such kind of expansions/parameterizations do not converge at supra-saturation densities where χ is not small enough, hindering an accurate determination of high-density E sym (ρ) even if its characteristic parameters at ρ0 are all well determined by experiments/observations. By expanding the E sym (ρ) in terms of a properly chosen auxiliary function Π sym (χ,Θ sym ) with a parameter Θsym fixed accurately by an experimental E sym (ρ r ) value at a reference density ρr, we show that the shortcomings of the χ-expansion can be completely removed or significantly reduced in determining the high-density behavior of E sym (ρ). In particular, using two significantly different auxiliary functions, we show that the new approach effectively incorporates higher χ-order contributions and converges to the same E sym (ρ) much faster than the conventional χ-expansion at densities ≲3ρ 0 . Several quantitative demonstrations using Monte Carlo simulations are given.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗