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At least 19 records

Studies of BONuS12 Radial GEM Detector and TCS Beam Spin Asymmetry in CLAS12

The Barely Offshell Nucleon Structure (BONuS12) experiment adopted the concept of spectator tagging technique to study the nearly-free neutron structure function Fn2 in the CLAS12 of Jefferson Lab. A novel Radial Time Projection Chamber (RTPC) detector was built, tested and integrated into the CLAS12 system to detect a back-moving low momentum tagged proton in d(e,ep)X deep-inelastic scattering. It was a 40 cm long gaseous detector consisting of 3 layers of cylindrical GEM foils for the charge amplification, with the data readout directly from the surrounding padboard. The RTPC detected the recoiling spectator proton, in coincidence with the scattered electron in the CLAS12. Nucleon structure functions are directly related to the partonic functions, quarks momentum distribution in one dimension. A Generalized Parton Distribution (GPD) came to the lime-light as it encodes the information of both longitudinal momentum and transverse position of partons inside the nucleons. Factorization of hard process such as DVCS allows to access GPDs. Timelike Compton Scattering (TCS), ?p ? ??p, is another process that allows to access the GPDs. TCS is studied experimentally in the CLAS12 of Jefferson lab using the quasi-real photoproduction of time-like photon which eventually decays to lepton pair. This dissertation presents the concept of spectator tagging in BONuS12, and the research and development efforts during the BONuS12 preparation leading up to the successful data-taking during spring and summer 2020. In addition, analysis framework to extract the beam spin asymmetry of TCS events through the CLAS12 Run group A data is presented.

Poudel, Jiwan↗

Pressure-induced metallization and 3d-like behavior in TcS 2

TcS 2 undergoes a charge transfer insulator to metal transition above 28 GPa. Here, laser annealing reveals a kinetically hindered high pressure arsenopyrite phase that is recoverable to ambient. The new phase is similar to the Mn-dichalcogenides rather than the expected Redichalcogenides and involves the formation of S–S and Tc–Tc bonds.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Characteristics and trends of Atlantic tropical cyclones that do and do not develop from African easterly waves

Abstract Atlantic tropical cyclones (TCs) are known to develop from African easterly waves (AEWs) that propagate across North Africa and out over the Atlantic Ocean. The relationship between AEWs and TCs has been the subject of numerous previous studies. There are, however, many Atlantic TCs that do not have AEW origins. In this study, we provide a novel analysis of the characteristics and trends of Atlantic TCs both with and without AEW origins using 43 years of observational and reanalysis data. To conduct this research, we identified TCs with and without AEW origins from the observational record between 1980 and 2022, and ran objective tracking algorithms on reanalysis data to identify the AEWs and TCs during this time period. We found statistically significant differences in the characteristics and environments of TCs with and without AEW origins. TCs with AEW origins are stronger and costlier, experience more favorable environmental conditions, and are more likely to make landfall in the Gulf of Mexico and the Caribbean when compared to TCs without AEW origins. Additionally, the 43‐year increasing trend in Atlantic TC activity is primarily driven by an increase in TCs with AEW origins that is associated with increasing AEW frequency and strength, with anthropogenic aerosols potentially driving this trend. In contrast, we found no trend in TCs without AEW origins.

Bercos‐Hickey, Emily↗

Five-day track forecast skills of WRF model for the western North Pacific tropical cyclones

In this study, the characteristics of simulated tropical cyclones (TCs) over the western North Pacific by a regional model (the WRF Model) are verified. We utilize 12-km horizontal grid spacing, and simulations are integrated for 5 days from model initialization. A total of 125 forecasts are divided into five clusters through the k-means clustering method. The TCs in the cluster 1 and 2 (group 1), which includes many TCs moving northward in the subtropical region, generally have larger track errors than for TCs in cluster 3 and 4 (group 2). The optimal steering vector is used to examine the difference in the track forecast skill between these two groups. The bias in the steering vector between the model and analysis data is found to be more substantial for group 1 TCs than group 2 TCs. The larger steering vector difference for group 1 TCs indicates that environmental fields tend to be poorly simulated in group 1 TC cases. Furthermore, the residual terms, including the storm-scale process, asymmetric convection distribution, or beta-related effect, are also larger for group 1 TCs than group 2 TCs. Therefore, it is probable that the large track forecast error for group 1 TCs is a result of unreasonable simulations of environmental wind fields and residual processes in the midlatitudes.

54 ENVIRONMENTAL SCIENCES↗

Azimuthally averaged wind and thermodynamic structures of tropical cyclones in global climate models and their sensitivity to horizontal resolution

Characteristics of tropical cyclones (TCs) in global climate models (GCMs) are known to be influenced by details of the model configurations, including horizontal resolution and parameterization schemes. Understanding model-to-model differences in TC characteristics is a prerequisite for reducing uncertainty in future TC activity projections by GCMs. This study performs a process-level examination of TC structures in eight GCM simulations that span a range of horizontal resolutions from 1° to 0.25°. A recently developed set of process-oriented diagnostics is used to examine the azimuthally averaged wind and thermodynamic structures of the GCM-simulated TCs. Results indicate that the inner-core wind structures of simulated TCs are more strongly constrained by the horizontal resolutions of the models than are the thermodynamic structures of those TCs. As expected, the structures of TC circulations become more realistic with smaller horizontal grid spacing, such that the radii of maximum wind (RMW) become smaller, and the maximum vertical velocities occur off the center. However, the RMWs are still too large, especially at higher intensities, and there are rising motions occurring at the storm centers, inconsistently with observations. The distributions of precipitation, moisture, radiative and surface turbulent heat fluxes around TCs are diverse, even across models with similar horizontal resolutions. At the same horizontal resolution, models that produce greater rainfall in the inner-core regions tend to simulate stronger TCs. Further, when TCs are weak, the radial gradient of net column radiative flux convergence is comparable to that of surface turbulent heat fluxes, emphasizing the importance of cloud-radiative feedbacks during the early developmental phases of TCs.

54 ENVIRONMENTAL SCIENCES↗

Impact of Tropical Cyclone Wind Forcing on the Global Climate in a Fully Coupled Climate Model

Tropical cyclones (TCs) alter upper-ocean temperature and influence ocean heat content via enhanced turbulent mixing. A better understanding of the role of TCs within the climate system requires a fully coupled modeling framework, where TC-induced ocean responses feed back to the atmosphere and subsequently to the climate mean state and variability. Here, we investigate the impacts of TC wind forcing on the global ocean and the associated feedbacks within the climate system using the fully coupled Community Earth System Model version 1.3 (CESM1.3). Using the low-resolution version of CESM1.3 (1° atmosphere and ocean grid spacing) with no intrinsic TCs, we conduct a suite of sensitivity experiments by inserting TC winds extracted from a high-resolution (0.25° atmosphere grid spacing) TC-permitting simulation into the low-resolution model. Results from the low-resolution TC experiment are compared to a low-resolution control simulation to diagnose TCs’ impact. We found that the added TC winds can increase ocean heat content by affecting ocean vertical mixing, air–sea enthalpy fluxes, and cloud amount. Here, the added TCs can influence mean SST, precipitation, ocean subsurface temperature, and ocean mixed layer depth. We found a strengthening of the wind-driven subtropical cells and a weakening of the Atlantic meridional overturning circulation due to the changes of surface buoyancy fluxes. TCs in the model cause anomalous equatorward ocean heat convergence in the deep tropics and an increase of poleward ocean heat transport out of the subtropics. Our modeling results provide new insights into the multiscale interactions between TCs and the coupled climate system.

54 ENVIRONMENTAL SCIENCES↗

AGC-4 Experiment Irradiation Monitoring Data Qualification Final Report

The Graphite Technology Development Program ran a series of six experiments to quantify the effects of irradiation on nuclear grade graphite. This report focuses on the fourth experiment, Advanced Graphite Creep 4 (AGC 4). The Advanced Reactor Development (ARD) Technology Development Office (TDO) Program for research and development activities require documentation of qualified monitoring data to design and license the first high-temperature reactor nuclear plant. Qualified data meets the requirements for use as described in the experiment planning and quality assurance documents. Failed data do not meet the requirements and provide no useable information. Trend data may not meet all requirements but still provide some useable information. Use of Trend data requires assessment of how any deficiencies affect a particular use of the data. AGC-4 began with Advanced Test Reactor (ATR) Cycle 157D on May 30, 2015. After irradiating the graphite for two cycles, the capsule was removed from the reactor after ATR Cycle 158A, which ended on January 2, 2016, due to interference with another experiment. Irradiation was resumed with Cycle 162A on October 7, 2017 after the interfering experiment was removed from the reactor. AGC-4 irradiation completed by the end of Cycle 166B on January 10, 2020. Between Cycles 162A and 166B, AGC-4 capsule was removed from the reactor core during two Powered Axial Locator Mechanism (PALM) Cycles 163A and 165A to avoid overheating. All thermocouples (TCs) have functioned throughout the AGC-4 experiment. A total of 9,256,184 out of all 11,167,213 temperature records (or 82.9%) are Qualified for use by the ARD Program and 1,911,029 missing values are Failed. Argon, helium, and total gas flow data were within expected ranges, except only eight out-of-range values occurred during outages. A total of 21,240,627 out of all 22,288,5103 gas flow rates (or 92.8%) are Qualified for use by the ARD Program and 1,644,476 are Failed records mostly due to missing values. Discharge gas line moisture values were consistently low during full ATR power, except for 162B, when moisture content was increasing to more than 200 ppmv by the end of this cycle. During outages, moisture content reached as high as 700 ppmv. 1,089,941 out of a total of 1,107,331 moisture values (or 98.4%) are within the measurement range of the instrument and are Qualified for use by the ARD Program and 17,390 missing moisture values are Failed. Graphite creep specimens were subjected to one of three loads: 393, 491, or 589 lbf. For a brief period during Cycle 157D between 12:19 on June 2, 2015, and 08:23 on June 11, 2015, the load cells were wired incorrectly, resulting in missing stack load data. Missing stack loads were estimated from measured ram pressures using regression equations developed from the existing data from Cycle 157D. Estimated stack loads during this period are considered to be an accurate representation of actual load applied to the stacks. These loads deviate slightly from the planned loads. This deviation does not prevent the data from being Qualified for use but must be taken into account when analyzing the effect of load on creep. 6,095,728 out of a total of 6,403,985 moisture values (or 95.2%) are within the measurement range of the instrument and are Qualified for use by the ARD Program and 308,257 missing load values are Failed. Stack displacement increased consistently throughout the eight cycles, with total displacement reached highest value of 2.4 in by the end of irradiation. During ATR outages, a set of pneumatic rams raised the stacks of graphite creep specimens to ensure the specimens were not stuck within the test train. This stack raising was performed seven times throughout irradiation. All stacks were raised successfully each time. 4,744,974 out of a total of 6,094,513 displacement values (or 77.9%) are within the measurement range of the instrument and are Qualified for use by the ARD Program and 1,349,539 displacement values are Failed mostly due to missing values. Analyses were conducted on correlations between TCs to look for trends and step changes that might indicate instrument degradation or failure. Correlation analysis was used to identify instances when TCs form short circuits, referred to as virtual junctions, which result in TCs reporting temperatures from some location in the capsule other than the location where they were intended to read. No evidence of virtual junctions was found. Analyses were also conducted on control charts of temperature differences of between two TCs, which are expected to behave consistently throughout the entire irradiation period. Upward or downward trend over time indicates at least one TC in the pair was drifted. Examining control charts for all 66 possible pairs out of twelve TCs installed in the AGC-4 capsules reveal no clear drift failures occurred, except unstable behavior of two TCs in Zone 3, TC-7 and TC-8, over irradiation time. In conclus

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Mid-century climate change impacts on tornado-producing tropical cyclones

Tornadoes are a co-occurring extreme that can be produced by landfalling tropical cyclones (TCs). These tornadoes can exacerbate the loss of life and property damage caused by the TC from which they were spawned. It is uncertain how the severe weather environments of landfalling TCs may change in a future climate and how this could impact tornado activity from TCs. In this study, we investigated four TCs that made landfall in the U.S. and produced large tornado outbreaks. We performed four-member ensembles of convective-allowing (4-km resolution) regional climate model simulations representing each TC in the historical climate and a mid-twenty-first century future climate. To identify potentially tornadic storms, or TC-tornado (TCT) surrogates, we used thresholds for three-hourly maximum updraft helicity and radar reflectivity, as tornadoes are not resolved in the model. We found that the ensemble-mean number of TCT-surrogates increased substantially (56–299%) in the future, supported by increases in most-unstable convective available potential energy, surface-to-700-hPa bulk wind shear, and 0–1-km storm-relative helicity in the tornado-producing region of the TCs. On the other hand, future changes in most-unstable convective inhibition had minimal influence on future TCT-surrogates. This provides robust evidence that tornado activity from TCs may increase in the future. Furthermore, TCT-surrogate frequency between 00Z and 09Z increased for three of the four cases, suggesting enhanced tornado activity at night, when people are asleep and more likely to miss warnings. All of these factors indicate that TC-tornadoes may become more frequent and a greater hazard in the future, compounding impacts from future increases in TC winds and precipitation.

54 ENVIRONMENTAL SCIENCES↗

Correlating Li-Ion Solvation Structures and Electrode Potential Temperature Coefficients

Temperature coefficients (TCs) for either electrochemical cell voltages or potentials of individual electrodes have been widely utilized to study the thermal safety and cathode/anode phase changes of lithium (Li)-ion batteries. However, the fundamental significance of single electrode potential TCs is little known. Here, we discover that the Li-ion desolvation process during Li deposition/intercalation is accompanied by considerable entropy change, which significantly contributes to the measured Li/Li + electrode potential TCs. To explore this phenomenon, we compare the Li/Li + electrode potential TCs in a series of electrolyte formulations, where the interaction between Li-ion and solvent molecules occurs at varying strength as a function of both solvent and anion species as well as salt concentrations. As a result, we establish correlations between electrode potential TCs and Li-ion solvation structures and further verify them by ab initio molecular dynamics simulations. We show that measurements of Li/Li + electrode potential TCs provide valuable knowledge regarding the Li-ion solvation environments and could serve as a screening tool when designing future electrolytes for Li-ion/Li metal batteries.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Role of Tropical Cyclones in Determining ENSO Characteristics

El Niño-Southern Oscillation (ENSO) can effectively modulate global tropical cyclone (TC) activity, but the role TCs may play in determining ENSO characteristics remains unclear. Here we investigate the impact of TC winds on ENSO using a suite of Earth system model experiments where we insert TC winds, extracted from a TC-permitting high-resolution simulation, into a low-resolution model configuration with nearly no intrinsic TCs. The presence of TC winds in the model increases ENSO power and shifts ENSO frequency closer to what we observe. TCs lead to an increase of strong to extreme El Niño events seen in observations and not simulated in the low-resolution model without intrinsic TCs, mainly through enhanced zonal advection feedback and thermocline feedback. Our results indicate that TCs play a fundamental role in producing the ENSO characteristics we experience today in the climate system and point to a two-way climatological interaction between TCs and ENSO.

54 ENVIRONMENTAL SCIENCES↗

The Relationship Between African Easterly Waves and Tropical Cyclones in Historical and Future Climates in the HighResMIP‐PRIMAVERA Simulations

Abstract The deadly and destructive nature of tropical cyclones (TCs) makes understanding their response to future climate change of the utmost importance. TC genesis hinges on multiple factors, including an initial disturbance. African easterly waves (AEWs) have been shown to serve as such disturbances for TCs developing in the North Atlantic. It is therefore crucial to understand the relationship between AEWs and TCs and how this relationship may be affected by climate change. In this study, we examine the AEW‐TC relationship in historical and future climates using three models from the HighResMIP PRIMAVERA simulations. The AEWs and TCs were tracked in the model data using objective tracking algorithms, and AEW and TC tracks were then matched together if they were close to each other in space and time. The strength of the AEWs was measured using the eddy kinetic energy and the curvature vorticity of the waves. TC strength and intensity were measured using potential intensity and lifetime maximum 10 m windspeed. We found that future changes in the frequency of AEWs are not a good indicator of future TC activity. However, AEW strength, as well as environmental conditions conducive to strong TCs, are good indicators of AEWs that develop into TCs in both historical and future climates.

54 ENVIRONMENTAL SCIENCES↗

Sensor Domain of Histidine Kinase VxrA of Vibrio cholerae : Hairpin-Swapped Dimer and Its Conformational Change

VxrA and VxrB are cognate histidine kinase (HK)-response regulator (RR) pairs of a two-component signaling system (TCS) found in Vibrio cholerae, a bacterial pathogen that causes cholera. The VxrAB TCS positively regulates virulence, the type VI secretion system, biofilm formation, and cell wall homeostasis in V. cholerae, providing protection from environmental stresses and contributing to the transmission and virulence of the pathogen. The VxrA HK has a unique periplasmic sensor domain (SD) and, remarkably, lacks a cytoplasmic linker domain between the second transmembrane helix and the dimerization and histidine phosphotransfer (DHp) domain, indicating that this system may utilize a potentially unique signal sensing and transmission TCS mechanism. Here, we have determined several crystal structures of VxrA-SD and its mutants. These structures reveal a novel structural fold forming an unusual β hairpin-swapped dimer. A conformational change caused by relative rotation of the two monomers in a VxrA-SD dimer could potentially change the association of transmembrane helices and, subsequently, the pairing of cytoplasmic DHp domains. Based on the structural observation, we propose a putative scissor-like closing regulation mechanism for the VxrA HK. IMPORTANCE V. cholerae has a dynamic life cycle, which requires rapid adaptation to changing external conditions. Two-component signal transduction (TCS) systems allow V. cholerae to sense and respond to these environmental changes. The VxrAB TCS positively regulates a number of important V. cholerae phenotypes, including virulence, the type six secretion system, biofilm formation, and cell wall homeostasis. Here, we provide the crystal structures of the VxrA sensor histidine kinase sensing domain and propose a mechanism for signal transduction. The cognate signal for VxrAB remains unknown; however, in this work we couple our structural analysis with functional assessments of key residues to further our understanding of this important TCS.

59 BASIC BIOLOGICAL SCIENCES↗

Characterizing Long Island’s Extreme Precipitation and Its Relationship to Tropical Cyclones

Since extreme precipitation impacts society on small scales (i.e., a few kilometers and smaller, it is worthwhile to explore extreme precipitation trends in localized regions, such as Long Island (LI), New York. Its coastal location makes it vulnerable to various extreme events, such as tropical cyclones (TCs). This work aimed to quantify the extreme precipitation events on LI that are caused by TCs, as well as the percentage of TCs passing close to LI that cause extreme precipitation events. Both gauge-based and satellite-based precipitation datasets of varying resolutions (DAYMET, IMERG, and CPC) were used to understand the impact of dataset selection. Results are shown for the common time period of 2001–2020, as well as the full time periods of each dataset. DAYMET shows the highest percentage of extreme precipitation events linked to TCs for 2001–2020 (a maximum of 7.2%) and the highest number of TCs that caused extreme precipitation events (36.5%), with IMERG showing similar results. For the full and common time periods, the highest percentage of extreme precipitation events caused by TCs was found in eastern LI. TC-related extreme precipitation averaged over LI varied year to year, and amounts were dependent on the resolution of the observational dataset, but most datasets showed an increasing trend in the last 19 years that is larger than the trend in mean precipitation. Current infrastructure in the region is likely inadequately prepared for future impacts from TC-related extreme precipitation events in such a population-dense region.

54 ENVIRONMENTAL SCIENCES↗

Impact of Rainfall on Tropical Cyclone-Induced Sea Surface Cooling

Tropical cyclones (TCs) are often accompanied by strong winds and torrential rains. While the winds associated with TCs tend to enhance mixing in the upper-ocean, the freshwater input from rain can stratify the water column and limit mixing. However, the extent to which the stabilizing effect of rainfall can compete with wind-induced mixing, and to what degree it modulates TC-induced sea surface cooling, remains unknown. Here we show, using a suite of observations, that heavy rains under weak TCs can significantly reduce the magnitude of cold wakes induced by them. Additionally, when compared to storms with low rain rates, the ocean surface under TCs with high rain rates freshens significantly and cools less. High-resolution climate model simulations and idealized experiments with an ocean mixed layer model support these results and reveal that oceanic mixing processes are primarily responsible for the reduced cooling under TCs, with a lesser role for surface fluxes.

54 ENVIRONMENTAL SCIENCES↗

Drivers of Atlantic Tropical Cyclogenesis: African Easterly Waves and the Environment

Abstract Tropical cyclone (TC) genesis requires favorable environmental conditions and an initial disturbance, which, in the North Atlantic, is often an African easterly wave (AEW). Although studies have examined how AEWs and the environment affect TC genesis, their relative importance is less understood. Here, we examine whether AEW strength or sea surface temperatures (SSTs) are the primary drivers of TC genesis. Regional model simulations were performed to address how increased AEW strength and SSTs affect the frequency of AEWs that develop into TCs in a year with below‐average TCs with AEW origins and SSTs. We found that environmental favorability plays a larger role than AEW strength in driving the frequency of TCs with AEW origins. Strengthening the AEWs did not affect the frequency of AEWs that develop into TCs due to low environmental favorability. Warmer SSTs led to increased environmental favorability and a statistically significant increase in TCs with AEW origins.

Bercos‐Hickey, Emily [Climate and Ecosystem Scienc↗

The Role of Multiscale Interaction in Tropical Cyclogenesis and Its Predictability in Near-Global Aquaplanet Cloud-Resolving Simulations

Tropical cyclogenesis (TCG) is a multiscale process that involves interactions between large-scale circulation and small-scale convection. A near-global aquaplanet cloud-resolving model (NGAqua) with 4-km horizontal grid spacing that produces tropical cyclones (TCs) is used to investigate TCG and its predictability. This study analyzes an ensemble of three 20-day NGAqua simulations, with initial white-noise perturbations of low-level humidity. TCs develop spontaneously from the northern edge of the intertropical convergence zone (ITCZ), where large-scale flows and tropical convection provide necessary conditions for barotropic instability. Zonal bands of positive low-level absolute vorticity organize into cyclonic vortices, some of which develop into TCs. A new algorithm is developed to track the cyclonic vortices. A vortex-following framework analysis of the low-level vorticity budget shows that vertical stretching of absolute vorticity due to convective heating contributes positively to the vorticity spinup of the TCs. A case study and composite analyses suggest that sufficient humidity is key for convective development. TCG in these three NGAqua simulations undergoes the same series of interactions. The locations of cyclonic vortices are broadly predetermined by planetary-scale circulation and humidity patterns associated with ITCZ breakdown, which are predictable up to 10 days. Whether and when the cyclonic vortices become TCs depend on the somewhat more random feedback between convection and vorticity.

54 ENVIRONMENTAL SCIENCES↗

An Evaluation of Tropical Cyclone Rainfall Structures in the HighResMIP Simulations against Satellite Observations

This study evaluates tropical cyclone (TC) rainfall structures in the CMIP6 HighResMIP global climate model (GCM) simulations against satellite rainfall retrievals. Here, we specifically focus on TCs within the deep tropics (25°S–25°N). Analysis of TC rain rate composites indicates that in comparison to the satellite observations at the same intensity, many HighResMIP simulations tend to overproduce rain rates around TCs, in terms of both maximum rain rate magnitude and area-averaged rain rates. In addition, as model horizontal resolution increases, the magnitude of the peak rain rate appears to increase. However, the area-averaged rain rates decrease with increasing horizontal resolution, partly due to the TC eyewall being located closer to the TC center, thus occupying a smaller area and contributing less to the area-averaged rain rates. The effect of ocean coupling is to lower the TC rain rates, bringing them closer to the satellite observations, due to reduced horizontal moisture flux convergence and surface latent heat flux beneath TCs. Examination of horizontal rain rate distributions indicates that vertical wind shear–induced rainfall asymmetries in HighResMIP-simulated TCs are qualitatively consistent with the observations. In addition, a positive relationship is observed between the area-averaged inner-core rainfall and TC intensification likelihoods across the HighResMIP simulations, as GCM simulations producing stronger TCs more frequently have the greater rainfall close to the center, in agreement with previous theoretical and GCM simulation results.

54 ENVIRONMENTAL SCIENCES↗

The essential Rhodobacter sphaeroides CenKR two-component system regulates cell division and envelope biosynthesis

Bacterial two-component systems (TCSs) often function through the detection of an extracytoplasmic stimulus and the transduction of a signal by a transmembrane sensory histidine kinase. This kinase then initiates a series of reversible phosphorylation modifications to regulate the activity of a cognate, cytoplasmic response regulator as a transcription factor. Several TCSs have been implicated in the regulation of cell cycle dynamics, cell envelope integrity, or cell wall development in Escherichia coli and other well-studied Gram-negative model organisms. However, many α-proteobacteria lack homologs to these regulators, so an understanding of how α-proteobacteria orchestrate extracytoplasmic events is lacking. In this work we identify an essential TCS, CenKR ( C ell en velope K inase and R egulator), in the α-proteobacterium Rhodobacter sphaeroides and show that modulation of its activity results in major morphological changes. Using genetic and biochemical approaches, we dissect the requirements for the phosphotransfer event between CenK and CenR, use this information to manipulate the activity of this TCS in vivo , and identify genes that are directly and indirectly controlled by CenKR in Rb . sphaeroides . Combining ChIP-seq and RNA-seq, we show that the CenKR TCS plays a direct role in maintenance of the cell envelope, regulates the expression of subunits of the Tol-Pal outer membrane division complex, and indirectly modulates the expression of peptidoglycan biosynthetic genes. CenKR represents the first TCS reported to directly control the expression of Tol-Pal machinery genes in Gram-negative bacteria, and we predict that homologs of this TCS serve a similar function in other closely related organisms. We propose that Rb . sphaeroides genes of unknown function that are directly regulated by CenKR play unknown roles in cell envelope biosynthesis, assembly, and/or remodeling in this and other α-proteobacteria.

Lakey, Bryan D. (ORCID:0000000332795242)↗