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At least 19 records

Transport in Halobacterium Halobium: Light-Induced Cation-Gradients, Amino Acid Transport Kinetics, and Properties of Transport Carriers

Cell envelope vesicles prepared from H. halobium contain bacteriorhodopsin and upon illumination protons are ejected. Coupled to the proton motive force is the efflux of Na(+). Measurements of Na-22 flux, exterior pH change, and membrane potential, Delta(psi) (with the dye 3,3'-dipentyloxadicarbocyanine) indicate that the means of Na(+) transport is sodium/proton exchange. The kinetics of the pH changes and other evidence suggests that the antiport is electrogenic (H(+)/Na(++ greater than 1). The resulting large chemical gradient for Na(+) (outside much greater than inside), as well as the membrane potential, will drive the transport of 18 amino acids. The I9th, glutamate, is unique in that its accumulation is indifferent to Delta(psi): this amino acid is transported only when a chemical gradient for Na(+) is present. Thus, when more and more NaCl is included in the vesicles glutamate transport proceeds with longer and longer lags. After illumination the gradient of H+() collapses within 1 min, while the large Na(+) gradient and glutamate transporting activity persists for 10- 15 min, indicating that proton motive force is not necessary for transport. A chemical gradient of Na(+), arranged by suspending vesicles loaded with KCl in NaCl, drives glutamate transport in the dark without other sources of energy, with V(sub max) and K(sub m) comparable to light-induced transport. These and other lines of evidence suggest that the transport of glutamate is facilitated by symport with Na(+), in an electrically neutral fashion, so that only the chemical component of the Na(+) gradient is a driving force.

Lanyi, Janos K.

Uncertain Representations of Sub-Grid Pollutant Transport in Chemistry-Transport Models and Impacts on Long-Range Transport and Global Composition

Sub-grid transport, by convection and turbulence, is known to play an important role in lofting pollutants from their source regions. Consequently, the long-range transport and climatology of simulated atmospheric composition are impacted. This study uses the Goddard Earth Observing System, Version 5 (GEOS-5) atmospheric model to study pollutant transport. The baseline model uses a Relaxed Arakawa-Schubert (RAS) scheme that represents convection through a sequence of linearly entraining cloud plumes characterized by unique detrainment levels. Thermodynamics, moisture and trace gases are transported in the same manner. Various approximate forms of trace-gas transport are implemented, in which the box-averaged cloud mass fluxes from RAS are used with different numerical approaches. Substantial impacts on forward-model simulations of CO (using a linearized chemistry) are evident. In particular, some aspects of simulations using a diffusive form of sub-grid transport bear more resemblance to space-biased CO observations than do the baseline simulations with RAS transport. Implications for transport in the real atmosphere will be discussed. Another issue of importance is that many adjoint/inversion computations use simplified representations of sub-grid transport that may be inconsistent with the forward models: implications will be discussed. Finally, simulations using a complex chemistry model in GEOS-5 (in place of the linearized CO model) are underway: noteworthy results from this simulation will be mentioned.

Pawson, Steven

Technology for design of transport aircraft. Lecture notes for MIT courses: Seminar 1.61 freshman seminar in air transportation and graduate course 1.201, transportation systems analysis

The design parameters which determine cruise performance for a conventional subsonic jet transport are discussed. It is assumed that the aircraft burns climb fuel to reach cruising altitude and that aeronautical technology determines the ability to carry a given payload at cruising altitude. It is shown that different sizes of transport aircraft are needed to provide the cost optimal vehicle for different given payload-range objectives.

Simpson, R. W.

An Investigation of Landing-Contact Conditions for Two Large Turbojet Transports and a Turboprop Transport During Routine Daylight Operations

The National Aeronautics and Space Administration has recently completed a statistical investigation of landing-contact conditions for two large turbojet transports and a turboprop transport landing on a dry runway during routine daylight operations at the Los Angeles International Airport. Measurements were made to obtain vertical velocity, airspeed, rolling velocity, bank angle, and distance from the runway threshold, just prior to ground contact. The vertical velocities at touchdown for one of the turbojet airplanes measured in this investigation were essentially the same as those measured on the same type of airplane during a similar investigation (see NASA Technical Note D-527) conducted approximately 8 months earlier. Thus, it appeared that 8 months of additional pilot experience has had no noticeable tendency toward lowering the vertical velocities of this transport. Distributions of vertical velocities for the turbojet transports covered in this investigation were similar and considerably higher than'those for the turboprop transport. The data for the turboprop transport were in good agreement with the data for the piston-engine transports (see NACA Report 1214 and NASA Technical Note D-147) for all the measured parameters. For the turbojet transports, 1 landing in 100 would be expected to equal or exceed a vertical velocity of approximately 4.2 ft/sec; whereas, for the turboprop transport, 1 landing in 100 would be expected to equal or exceed 3.2 ft/sec. The mean airspeeds at touchdown for the three transports ranged from 22.5 percent to 26.6 percent above the stalling speed. Rolling velocities for the turbojet transports were considerably higher than those for the turboprop transport. Distributions of bank angles at contact for the three transports were similar. For each type of airplane, 1 landing in 100 would be expected to equal or exceed a bank angle at touchdown of approximately 3.0 deg. Distributions of touchdown distances for the three transports were also quite similar. Touchdown distances from the threshold for 1 landing in 100 ranged from 2,500 feet for the turboprop transport to 2,800 feet for one of the turbojet transports.

Stickle, Joseph W.

Angular neutron transport investigation in the HZETRN free-space ion and nucleon transport and shielding computer program

Extension of the high charge and energy (HZE) transport computer program HZETRN for angular transport of neutrons is considered. For this paper, only light ion transport, He4 and lighter, will be analyzed using a pure solar proton source. The angular transport calculator is the ANISN/PC program which is being controlled by the HZETRN program. The neutron flux values are compared for straight-ahead transport and angular transport in one dimension. The shield material is aluminum and the target material is water. The thickness of these materials is varied; however, only the largest model calculated is reported which is 50 gm/sq cm of aluminum and 100 gm/sq cm of water. The flux from the ANISN/PC calculation is about two orders of magnitude lower than the flux from HZETRN for very low energy neutrons. It is only a magnitude lower for the neutrons in the 10 to 20 MeV range in the aluminum and two orders lower in the water. The major reason for this difference is in the transport modes: straight-ahead versus angular. The angular treatment allows a longer path length than the straight-ahead approximation. Another reason is the different cross section sets used by the ANISN/PC-BUGLE-80 mode and the HZETRN mode. The next step is to investigate further the differences between the two codes and isolate the differences to just the angular versus straight-ahead transport mode. Then, create a better coupling between the angular neutron transport and the charged particle transport.

Singleterry, R. C., Jr.

Influence of Transport on Two-Dimensional Model Simulation. Tracer Sensitivity to 2-D Model Transport: Long Lived Tracers - 1

In this study, we examine the sensitivity of long lived tracers to changes in the base transport components in our 2-D model. Changes to the strength of the residual circulation in the upper troposphere and stratosphere and changes to the lower stratospheric K(sub zz) had similar effects in that increasing the transport rates decreased the overall stratospheric mean age, and increased the rate of removal of material from the stratosphere. Increasing the stratospheric K(sub yy) increased the mean age due to the greater recycling of air parcels through the middle atmosphere, via the residual circulation, before returning to the troposphere. However, increasing K(sub yy) along with self-consistent increases in the corresponding planetary wave drive, which leads to a stronger residual circulation, more than compensates for the K(sub yy)-effect, and produces significantly younger ages throughout the stratosphere. Simulations with very small tropical stratospheric K(sub yy) decreased the globally averaged age of air by as much as 25% in the middle and upper stratosphere, and resulted in substantially weaker vertical age gradients above 20 km in the extratropics. We found only very small stratospheric tracer sensitivity to the magnitude of the horizontal mixing across the tropopause, and to the strength of the mesospheric gravity wave drag and diffusion used in the model. We also investigated the transport influence on chemically active tracers and found a strong age-tracer correlation, both in concentration and calculated lifetimes. The base model transport gives the most favorable overall comparison with a variety of inert tracer observations, and provides a significant improvement over our previous 1995 model transport. Moderate changes to the base transport were found to provide modest agreement with some of the measurements. Transport scenarios with residence times ranging from moderately shorter to slightly longer relative to the base case simulated N2O lifetimes that were within the observational estimates of Volk et al. [1997]. However, only scenarios with rather fast transport rates were comparable with the Volk et al. estimates of CFCl3 lifetimes. This is inconsistent with model-measurement comparisons of mean age in which the base model or slightly slower transport rates compared the most favorably with balloon SF6 data. For all comparisons shown, large transport changes away from the base case resulted in simulations that were outside the range of measurements, and in many cases, far outside this range.

Fleming, Eric L.

Evaluation of Transport in the Lower Tropical Stratosphere in a Global Chemistry and Transport Model

A general circulation model (GCM) relies on various physical parameterizations and provides a solution to the atmospheric equations of motion. A data assimilation system (DAS) combines information from observations with a GCM forecast and produces analyzed meteorological fields that represent the observed atmospheric state. An off-line chemistry and transport model (CTM) can use winds and temperatures from a either a GCM or a DAS. The latter application is in common usage for interpretation of observations from various platforms under the assumption that the DAS transport represents the actual atmospheric transport. Here we compare the transport produced by a DAS with that produced by the particular GCM that is combined with observations to produce the analyzed fields. We focus on transport in the tropics and middle latitudes by comparing the age-of-air inferred from observations of SF6 and CO2 with the age-of-air calculated using GCM fields and DAS fields. We also compare observations of ozone, total reactive nitrogen, and methane with results from the two simulations. These comparisons show that DAS fields produce rapid upward tropical transport and excessive mixing between the tropics and middle latitudes. The unrealistic transport produced by the DAS fields may be due to implicit forcing that is required by the assimilation process when there is bias between the GCM forecast and observations that are combined to produce the analyzed fields. For example, the GCM does not produce a quasi-biennial oscillation (QBO). The QBO is present in the analyzed fields because it is present in the observations, and systematic implicit forcing is required by the DAS. Any systematic bias between observations and the GCM forecast used to produce the DAS analysis is likely to corrupt the transport produced by the analyzed fields. Evaluation of transport in the lower tropical stratosphere in a global chemistry and transport model.

Douglass, Anne R.

Neoclassical transport and profile prediction in transport barriers

Strong gradient regions in tokamaks, such as the pedestal or internal transport barriers, are regions of reduced turbulence where neoclassical transport can play a dominant role. However, standard neoclassical transport theory assumes that the gradient length scales of density, temperature, and potential are of the order of the system size. In the pedestal, gradient length scales are much shorter and are measured to be of the order of the ion poloidal gyroradius. We present an extension of neoclassical theory that is applicable in transport barriers of large aspect ratio tokamaks. We show that particle and momentum transport are connected in such a way that a source of parallel momentum can drive a significant neoclassical ion particle flux. In strong gradient regions, density, electric potential, mean parallel flow, and ion temperature are shown to no longer be flux functions. Instead, they have a small but important poloidally varying piece that modifies the transport equations to lowest order. This introduces a nonlinearity in the transport problem through the coupling with quasineutrality that yields multiple co-existing solutions when solving for the plasma profiles. The different solutions could be connected to low and high transport states and jumps between solutions could provide a new neoclassical explanation for H-L back-transitions.

Trinczek, Silvia [Princeton Plasma Physics Laborat

A quasi-linear model of electromagnetic turbulent transport and its application to flux-driven transport predictions for STEP

A quasi-linear reduced transport model is developed from a database of high-β electromagnetic nonlinear gyrokinetic simulations performed with spherical tokamak for energy production (STEP) relevant parameters. The quasi-linear model is fully electromagnetic and accounts for the effect of equilibrium flow shear using a novel approach. Its flux predictions are shown to agree quantitatively with predictions from local nonlinear gyrokinetic simulations across a broad range of STEP-relevant local equilibria. This reduced transport model is implemented in the T3D transport solver that is used to perform the first flux-driven simulations for STEP to account for transport from hybrid kinetic ballooning mode turbulence, which dominates over a wide region of the core plasma. Nonlinear gyrokinetic simulations of the final transport steady state from T3D return turbulent fluxes that are consistent with the reduced model, indicating that the quasi-linear model may also be appropriate for describing the transport steady state. Within the assumption considered here, our simulations support the existence of a transport steady state in STEP with a fusion power comparable to that in the burning flat top of the conceptual design, but do not demonstrate how this state can be accessed.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY

Conformational free energy landscape of a glutamate transporter and microscopic details of its transport mechanism

Removing glutamate from the synaptic cleft is vital for proper function of the brain. Excitatory amino acid transporters mediate this process by uptaking the neurotransmitter from the synaptic cleft back to the cell after its release. The archaeal homolog, Glt Ph , an aspartate transporter fromPyrococcus horikoshii, presents the best structurally characterized model for this family of transporters. In order to transport, Glt Ph undergoes elevator-like conformational changes between inward-facing (IF) and outward-facing (OF) states. Here, we characterize, at an atomic level, the OF⇌IF transition of Glt Ph in differentapo/bound states using a combination of ensemble-based enhanced sampling techniques, employing more than two thousand of coupled simulation replicas of membrane-embedded Glt Ph . The resulting free-energy profiles portray the transition ofapo/bound states as a complex four-stage process, while sodium binding alone locks the structure in one of its states. Along the transition, the transport domain (TD) disengages from the scaffold domain (SD), allowing it to move as a piston sliding vertically with respect to the membrane during the elevator-like motion of TD. Lipid interactions with residues comprising the SD–TD interface directly influence the large-scale conformational changes and, consequently, the energetics of transport. Structural intermediates formed during the transition leak water molecules and may correlate to the uncoupled Cl − ion conductance observed experimentally in both prokaryotic and mammalian glutamate transporters. Mechanistic insights obtained from our study provide a structural framework for better development of therapeutic for neurological disorders.

Science & Technology - Other Topics

A study of characteristics of intercity transportation systems. Phase 1: Definition of transportation comparison methodology

Decision making in early transportation planning must be responsive to complex value systems representing various policies and objectives. The assessment of alternative transportation concepts during the early initial phases of the system life cycle, when supportive research and technology development activities are defined, requires estimates of transportation, environmental, and socio-economic impacts throughout the system life cycle, which is a period of some 40 or 50 years. A unified methodological framework for comparing intercity passenger and freight transportation systems is described and is extended to include the comparison of long term transportation trends arising from implementation of the various R & D programs. The attributes of existing and future transportation systems are reviewed in order to establish measures for comparison, define value functions, and attribute weightings needed for comparing alternative policy actions for furthering transportation goals. Comparison criteria definitions and an illustrative example are included.

English, J. M.

Palmitate stimulates glucose transport in rat adipocytes by a mechanism involving translocation of the insulin sensitive glucose transporter (GLUT4)

In rat adipocytes, palmitate: a) increases basal 2-deoxyglucose transport 129 +/- 27% (p less than 0.02), b) decreases the insulin sensitive glucose transporter (GLUT4) in low density microsomes and increases GLUT4 in plasma membranes and c) increases the activity of the insulin receptor tyrosine kinase. Palmitate-stimulated glucose transport is not additive with the effect of insulin and is not inhibited by the protein kinase C inhibitors staurosporine and sphingosine. In rat muscle, palmitate: a) does not affect basal glucose transport in either the soleus or epitrochlearis and b) inhibits insulin-stimulated glucose transport by 28% (p less than 0.005) in soleus but not in epitrochlearis muscle. These studies demonstrate a potentially important differential role for fatty acids in the regulation of glucose transport in different insulin target tissues.

NASA Discipline Cell Biology

Atmospheric and oceanic energy transport during North Atlantic freshening events: influences of moisture transport and hydrologic cycle feedbacks

Analogs of present-day rapid ice melt can be found in episodic discharges of icebergs that occurred during glacial periods called Heinrich events. This introduces excess meltwater into the North Atlantic and weakens the Atlantic thermohaline circulation (AMOC), triggering a hydrologic cycle–AMOC collapse feedback as the atmospheric energy transport compensates for reduced northward heat transport. Here we employ a novel series of 100-year North Atlantic “hosing” simulations to investigate atmospheric and oceanic energy transport response from freshwater forcing, focusing in particular on the role of atmospheric rivers (ARs) within atmospheric energy transport. Importantly, we use an “overwriting” methodology that allow us to attribute AMOC weakening to added North Atlantic meltwater and subsequent hydrologic cycle responses, respectively. In contrast to far-reaching response of transient eddies, our results show a substantial increase in moisture convergence from ARs that is geographically constrained to the North Atlantic midlatitudes. Such AR changes nevertheless comprise an important component of net precipitation changes over the Euro-Atlantic sector, with the amount being comparable to that from transient eddies over the subpolar Atlantic. Over the course of the century-long simulations, we demonstrate that hydrologic cycle responses to North Atlantic freshening and subsequent feedbacks, including those from ARs, account for approximately half of the simulated AMOC collapse. Furthermore, our work highlights the dynamics of atmospheric moisture transport response to North Atlantic freshening events and elucidates how intensifying moisture transport may accelerate AMOC collapse in the future.

Atmospheric Science

Energy transports by ocean and atmosphere based on an entropy extremum principle. I - Zonal averaged transports

The maximum entropy production principle suggested by Paltridge (1975) is applied to separating the satellite-determined required total transports into atmospheric and oceanic components. Instead of using the excessively restrictive equal energy dissipation hypothesis as a deterministic tool for separating transports between the atmosphere and ocean fluids, the satellite-inferred required 2D energy transports are imposed on Paltridge's energy balance model, which is then solved as a variational problem using the equal energy dissipation hypothesis only to provide an initial guess field. It is suggested that Southern Ocean transports are weaker than previously reported. It is argued that a maximum entropy production principle can serve as a governing rule on macroscale global climate, and, in conjunction with conventional satellite measurements of the net radiation balance, provides a means to decompose atmosphere and ocean transports from the total transport field.

Sohn, Byung-Ju

A class of the van Leer-type transport schemes and its application to the moisture transport in a general circulation model

A generalized form of the second-order van Leer transport scheme is derived. Several constraints to the implied subgrid linear distribution are discussed. A very simple positive-definite scheme can be derived directly from the generalized form. A monotonic version of the scheme is applied to the Goddard Laboratory for Atmospheres (GLA) general circulation model (GCM) for the moisture transport calculations, replacing the original fourth-order center-differencing scheme. Comparisons with the original scheme are made in idealized tests as well as in a summer climate simulation using the full GLA GCM. A distinct advantage of the monotonic transport scheme is its ability to transport sharp gradients without producing spurious oscillations and unphysical negative mixing ratio. Within the context of low-resolution climate simulations, the aforementioned characteristics are demonstrated to be very beneficial in regions where cumulus convection is active. The model-produced precipitation pattern using the new transport scheme is more coherently organized both in time and in space, and correlates better with observations. The side effect of the filling algorithm used in conjunction with the original scheme is also discussed, in the context of idealized tests. The major weakness of the proposed transport scheme with a local monotonic constraint is its substantial implicit diffusion at low resolution. Alternative constraints are discussed to counter this problem.

Lin, Shian-Jiann

Radiation Transport and Shielding for Space Exploration and High Speed Flight Transportation

Transportation of ions and neutrons in matter is of direct interest in several technologically important and scientific areas, including space radiation, cosmic ray propagation studies in galactic medium, nuclear power plants and radiological effects that impact industrial and public health. For the proper assessment of radiation exposure, both reliable transport codes and accurate data are needed. Nuclear cross section data is one of the essential inputs into the transport codes. In order to obtain an accurate parametrization of cross section data, theoretical input is indispensable especially for processes where there is little or no experimental data available. In this grant period work has been done on the studies of the use of relativistic equations and their one-body limits. The results will be useful in choosing appropriate effective one-body equation for reaction calculations. Work has also been done to improve upon the data base needed for the transport codes used in the studies of radiation transport and shielding for space exploration and high speed flight transportation. A phenomenological model was developed for the total absorption cross sections valid for any system of charged and/or uncharged collision pairs for the entire energy range. The success of the model is gratifying. It is being used by other federal agencies, national labs and universities. A list of publications based on the work during the grant period is given below and copies are enclosed with this report.

Maung, Khin Maung

Evaluation of Transport in the Lower Tropical Stratosphere in a Global Chemistry and Transport Model

Off-line models of the evolution of stratospheric constituents use meteorological information from a general circulation model (GCM) or from a data assimilation system (DAS). Here we focus on transport in the tropics and between the tropics and middle latitudes. Constituent fields from two simulations are compared with each other and with observations. One simulation uses winds from a GCM and the second uses winds from a DAS that has the same GCM at its core. Comparisons of results from the two simulations with observations from satellite, aircraft, and sondes are used to judge the realism of the tropical transport. Faithful comparisons between simulated fields and observations for O3, CH4, and the age-of-air are found for the simulation using the GCM fields. The same comparisons for the simulation using DAS fields show rapid upward tropical transport and excessive mixing between the tropics and middle latitudes. The unrealistic transport found in the DAS fields may be due to the failure of the GCM used in the assimilation system to represent the quasi-biennial oscillation. The assimilation system accounts for differences between the observations and the GCM by requiring implicit forcing to produce consistency between the GCM and observations. These comparisons suggest that the physical consistency of the GCM fields is more important to transport characteristics in the lower tropical stratosphere than the elimination bias with respect to meteorological observations that is accomplished by the DAS. The comparisons presented here show that GCM fields are more appropriate for long-term calculations to assess the impact of changes in stratospheric composition because the balance between photochemical and transport terms is likely to be represented correctly.

Douglass, Anne R.

Fusing Edge Computing with Transport Security by Leveraging the Controller Area Network Transport Security Tracking and Reporting (C-STAR) Unit

Rapid advances in embedded system complexity and capability provides exciting opportunities for transportation security deployment. Manufacturers and developers of these embedded systems continue to provide lower cost and more powerful solutions that can be leveraged by researchers and engineers. Furthermore, deploying these devices at the “edge” of the Internet-of-Things (IoT) infrastructure provides opportunities for highly capable applications in transport security. In an edge computation architecture, the device is co-located at the source of the data in the larger IoT structure – this provides computational capability at the location directly where the data is collected. For shipment transport security, this provides a direct compute node for digestion of data and mitigation actions in real-time. In our application, the vehicle provides a significant amount of this data that can be processed in real-time via the Controller Area Network Transport Security Tracking and Reporting (C-STAR) edge device. Utilization of a computational node located on the vehicle, such as the C-STAR, capitalizes on previously discussed opportunities of edge architectures. In this paper, we will discuss this security solution’s usability, current deployments, and scalability to further applications in transport security. First, we will cover the supported vehicle platforms that can leverage the C-STAR technology. This will be particularly relevant to medium- and heavy-duty vehicles transporting high-risk shipments. Second, we will speak to current deployments of the C-STAR that are ongoing. Finally, we will discuss additional areas for expansion such as maturing the onboard algorithms through continuing collaborations.

Cook, Adian [ORNL] (ORCID:0000000160825395)