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At least 19 records

Proton affinity of methyl nitrate - Less than proton affinity of nitric acid

Several state-of-the-art ab initio quantum mechanical methods were used to investigate the equilibrium structure, dipole moments, harmonic vibrational frequencies, and IR intensities of methyl nitrate, methanol, and several structures of protonated methyl nitrate, using the same theoretical methods as in an earlier study (Lee and Rice, 1992) of nitric acid. The ab initio results for methyl nitrate and methanol were found to be in good agreement with available experimental data. The proton affinity (PA) of methyl nitrate was calculated to be 176.9 +/-5 kcal/mol, in excellent agreement with the experimental value 176 kcal/mol obtained by Attina et al. (1987) and less than the PA value of nitric acid. An explanation of the discrepancy of the present results with those of an earlier study on protonated nitric acid is proposed.

Lee, Timothy J.↗

Affine Generalized Inverse for Optimal Control Allocation

This research is a follow on to the "Optimal Control Prediction Method for Control Allocation" paper in which the Prediction Method iterative algorithm was introduced. Previously, the Prediction Method was shown to provide optimal control allocation solutions over the entire Attainable Moment Set for the Moore-Penrose and the generalized (weighted) inverse. As an extension to the Prediction Method, this paper introduces a family of Moore Penrose Affine Generalized Inverses, applicable for all moments, which compute control allocation solutions using a constant matrix and fixed null-space vector. The Moore-Penrose Affine Generalized Inverse is proven to yield equivalent solutions to those of the Prediction Method and therefore is guaranteed to yield Moore-Penrose optimal control allocation solutions. While the Prediction Method is applicable for any moment along an a priori specified moment direction, the Affine Generalized Inverse is shown to yield optimal control allocation solutions in a neighborhood of the given moment which is not restricted to a specified moment direction. Furthermore, the Affine Generalized Inverse is shown to provide the time derivative of optimal control allocation solutions and to facilitate maintaining solutions within control effector rate limitations. The Moore-Penrose Affine Generalized Inverse is broadened to encompass any arbitrary (weighted) Affine Generalized Inverse. Finally, a method of creating a moment lookup table is outlined to utilize the Affine Generalized Inverse as an offline control allocation solution for all moments in the Attainable Moment Set.

Acheson, Michael J.↗

Electron Affinity Calculations for Thioethers

Previous work indicated that polyphenyl thioethers possessed chemical properties, related to their electron affinities, which could allow them to function as vapor phase lubricants (VPL). Indeed, preliminary tribological tests revealed that the thioethers could function as vapor phase lubricants but not over a wide temperature and hertzian pressure range. Increasing the electron affinity of the thioethers may improve their VPL properties over this range. Adding a substituent group to the thioether will alter its electron affinity in many cases. Molecular orbital calculations were undertaken to determine the effect of five different substituent groups on the electron affinity of polyphenyl thioethers. It was found that the NO2, F, and I groups increased the thioethers electron affinity by the greatest amount. Future work will involve the addition of these groups to the thioethers followed by tribological testing to assess their VPL properties.

Sulton, Deley L.↗

Semiempirical Theories of the Affinities of Negative Atomic Ions

The determination of the electron affinities of negative atomic ions by means of direct experimental investigation is limited. To supplement the meager experimental results, several semiempirical theories have been advanced. One commonly used technique involves extrapolating the electron affinities along the isoelectronic sequences, The most recent of these extrapolations Is studied by extending the method to Include one more member of the isoelectronic sequence, When the results show that this extension does not increase the accuracy of the calculations, several possible explanations for this situation are explored. A different approach to the problem is suggested by the regularities appearing in the electron affinities. Noting that the regular linear pattern that exists for the ionization potentials of the p electrons as a function of Z, repeats itself for different degrees of ionization q, the slopes and intercepts of these curves are extrapolated to the case of the negative Ion. The method is placed on a theoretical basis by calculating the Slater parameters as functions of q and n, the number of equivalent p-electrons. These functions are no more than quadratic in q and n. The electron affinities are calculated by extending the linear relations that exist for the neutral atoms and positive ions to the negative ions. The extrapolated. slopes are apparently correct, but the intercepts must be slightly altered to agree with experiment. For this purpose one or two experimental affinities (depending on the extrapolation method) are used in each of the two short periods. The two extrapolation methods used are: (A) an isoelectronic sequence extrapolation of the linear pattern as such; (B) the same extrapolation of a linearization of this pattern (configuration centers) combined with an extrapolation of the other terms of the ground configurations. The latter method Is preferable, since it requires only experimental point for each period. The results agree within experimental error with all data, except with the most recent value of C, which lies 10% lower.

Edie, John W.↗

Vibrations of circular orthotropic plates in affine space

The vibration of an initially compressed plate having a circular geometry and orthotropy is examined in an affine space. The classical linear plate theory and Hamilton's principle are employed. The equations of motion of the plate are particularly simple in the chosen affine space, permitting a free-vibration study of the entire spectrum of composite materials with polar orthotropy. Approximate but very accurate standing-wave-type mode shapes are used in solving the essentially double eigenvalue problem to determine the effects of midplane forces on the vibration frequencies of the plate. The results indicate that the affine-space frequency increases with increasing stiffness ratio but decreases with increasing midplane compression. It is also discovered that, contrary to the trends observed for rectangular geometry and orthotropy by Oyibo (1981), Brunelle (1982), and Brunelle and Oyibo (1983), the affine-space frequency increases with increasing generalized Poisson's ratio.

Oyibo, G. A.↗

Metal chelate affinity precipitation of RNA and purification of plasmid DNA

The affinity of metal chelates for amino acids, such as histidine, is widely used in purifying proteins, most notably through six-histidine 'tails'. We have found that metal affinity interactions can also be applied to separation of single-stranded nucleic acids through interactions involving exposed purines. Here we describe a metal affinity precipitation method to resolve RNA from linear and plasmid DNA. A copper-charged copolymer of N-isopropyl acrylamide (NIPAM) and vinyl imidazole (VI) is used to purify plasmid from an alkaline lysate of E. coli. The NIPAM units confer reversible solubility on the copolymer while the imidazole chelates metal ions in a manner accessible to interaction with soluble ligands. RNA was separated from the plasmid by precipitation along with the polymer in the presence of 800 mM NaCl. Bound RNA could be recovered by elution with imidazole and separated from copolymer by a second precipitation step. RNA binding showed a strong dependence on temperature and on the type of buffer used.

Non-NASA Center↗

On the electron affinity of the oxygen atom

The electron affinity (EA) of oxygen is computed to be 1.287 eV, using 2p electron full configuration-interaction (CI) wave functions expanded in a 6s5p3d2f Slater-type orbital basis. The best complete active space self-consistent field - multireference CI (CASSCF-MRCI) result including only 2p correlation is 1.263 eV. However, inclusion of 2s intrashell and 2s2p intershell correlation increases the computed EA to 1.290 at the CASSCF-MRCI level. At the full CI basis set limit, the 2s contribution to the electron affinity is estimated to be as large as 0.1 eV. This study clearly establishes the synergistic effect between the higher excitations and basis set completeness on the electron affinity when the 2s electrons are correlated.

Bauschlicher, C. W., Jr.↗

On the electron affinity of the oxygen atom

The electron affinity of oxygen is computed to be 1.287 eV, at the full CI level using a 6s5p3d 2f Slater-type orbital basis and correlating only the 2p electrons. The best CASSCF-MRCI result including only 2p correlation is 1.263 eV. However, inclusion of 2s intrashell and 2s2p intershell coorelation increases the computed EA to 1.290 eV at the CASSCF-MRCI level. At the full CI basis set limit, the 2s contribution to the electron affinity is estimated to be as large as 0.1 eV. The higher excitation contribution to the electron affinity is found to increase substantially with basis set completeness, especially when the 2s electrons are correlated. Relativistic effects are shown to make a small (less than 0.01 eV) change in the EA.

Bauschlicher, C. W., Jr.↗

Optimized Structures and Proton Affinities of Fluorinated Dimethyl Ethers: An Ab Initio Study

Ab initio methods have been used to investigate the proton affinity and the geometry changes upon protonation for the molecules (CH3)2O, (CH2F)2O, (CHF2)2O, and (CF3)2O. Geometry optimizations were performed at the MP2/3-2 I G level, and the resulting geometries were used for single-point energy MP2/6-31G calculations. The proton affinity calculated for (CH3)2O was 7 Kjoule/mole from the experimental value, within the desired variance of +/- 8Kjoule/mole for G2 theory, suggesting that the methodology used in this study is adequate for energy difference considerations. For (CF3)20, the calculated proton affinity of 602 Kjoule/mole suggests that perfluorinated ether molecules do not act as Lewis bases under normal circumstances; e.g. degradation of commercial lubricants in tribological applications.

Orgel, Victoria B.↗

Theoretical and Experimental Determination of the Proton Affinity of (CF3CH2)2O

We report the experimental determination of the proton affinity of the molecule (CF3CH2)2O using chemical ionization mass spectrometry, and we compare it to the theoretical value obtained for protonation at the oxygen atom using the calculational methodology (MP2/6-31G**//MP2/3-21G). The proton affinity for this molecule as measured by bracketing experiments was between 724 kJ/mole and 741 kJ/mole. Ab initio (MP2/6-31G**//MP2/3-21G) calculations yield a value of about 729 kJ/mole, in agreement with the chemical ionization experiments. The results of these and related calculations suggest that the (MP2/6-31G**//MP2/3-21G) methodology is acceptable for estimating the proton affinities of partially-and fully-fluorinated methyl and ethyl ethers. We submit that any conclusions about the chemistry of fluoroether polymer lubricants based on their basicity can also be predicted reliably with such calculations.

Zehe, Michael J.↗

Expression and affinity purification of recombinant proteins from plants

With recent advances in plant biotechnology, transgenic plants have been targeted as an inexpensive means for the mass production of proteins for biopharmaceutical and industrial uses. However, the current plant purification techniques lack a generally applicable, economic, large-scale strategy. In this study, we demonstrate the purification of a model protein, beta-glucuronidase (GUS), by employing the protein calmodulin (CaM) as an affinity tag. In the proposed system, CaM is fused to GUS. In the presence of calcium, the calmodulin fusion protein binds specifically to a phenothiazine-modified surface of an affinity column. When calcium is removed with a complexing agent, e.g., EDTA, calmodulin undergoes a conformational change allowing the dissociation of the calmodulin-phenothiazine complex and, therefore, permitting the elution of the GUS-CaM fusion protein. The advantages of this approach are the fast, efficient, and economical isolation of the target protein under mild elution conditions, thus preserving the activity of the target protein. Two types of transformation methods were used in this study, namely, the Agrobacterium-mediated system and the viral-vector-mediated transformation system. Copyright 2002 Elsevier Science (USA).

Non-NASA Center↗

Boronate affinity adsorption of RNA: possible role of conformational changes

Batch equilibrium adsorption isotherm determination is used to characterize the adsorption of mixed yeast RNA on agarose-immobilized m-aminophenylboronic acid. It is shown that the affinity-enhancing influence of divalent cations depends strongly on the precise nature of the cation used, with barium being far more effective than the conventionally-used magnesium. This adsorption-promoting influence of barium is suggested to arise primarily from ionic influences on the structure and rigidity of the RNA molecule, as the adsorption of ribose-based small molecules is not similarly affected. The substitution of barium for the standard magnesium counterion does not greatly promote the adsorption of DNA, implying that the effect is specific to RNA and may be useful in boronate-based RNA separations. RNA adsorption isotherms exhibit sharp transitions as functions of temperature, and these transitions occur at different temperatures with Mg2+ and with Ba2+. Adsorption affinity and capacity were found to increase markedly at lower temperatures, suggestive of an enthalpically favored interaction process. The stoichiometric displacement parameter, Z, in Ba2+ buffer is three times the value in Mg2+ buffer, and is close to unity.

NASA Discipline Environmental Health↗

A minimax approach to spatial estimation using affinity matrices

Estimates made in the plane to improve on noisy unbiased estimates were combined. Only a small fraction of points in a giant grid were used to do this, those that are most like a given point. A component of this process defining an affinity matrix of values, indicating which points are relevant to others. Minimax rules are shown to be based on affinity matrices.

Morris, C. N.↗

Electron affinities of the alkali dimers - Na2, K2, and Rb2

Ab initio calculations on the ground states of the alkali dimers, Na2, K2, and Rb2, and their anions are reported. The calculations employ large Gaussian basis sets and account for nearly all of the valence correlation energy. The calculated atomic electron affinities are within 0.02 eV of experiment and the calculated adiabatic electron affinities for Na2, K2, and Rb2 are, respectively, 0.470, 0.512, and 0.513 eV.

Partridge, H.↗

Generic Karman-Rostovstev plate equations in an affine space

The Karman-Rostovstev plate equations are affinely transformed into equations that depend on the generic plate constants generalized rigidity, generalized extensional rigidity, and generalized Poisson ratio associated with the well-known linearized orthotropic plate/slab equations. Furthermore, since the generalized extensional rigidity is a function of generalized rigidity and generalized Poisson ratio only, with generalized Poisson ratio being a weak parameter, the only fundamental constant is generalized rigidity. This means that regardless of what analysis technique is used, the results can be cast in terms of only one strong material parameter (whose range is from zero to one). The affine stretching is performed on the dependent variables as well as the independent variables, so that the dependence of all quantities of interest on generalized rigidity and generalized Poisson ratio are easily calculated (e.g., even auxiliary quantities such as stress, strain, all weighted stress resultants, etc.). Some typical results (static side load response, collapse load limited by rib buckling) are presented by modifying an approximate technique due to Donnell (1976).

Brunelle, E. J.↗

Isoelectric focusing-affinity immunoblot analysis of mouse monoclonal antibodies to the four human IgG subclasses

Isoelectric focusing (IEF)/affinity immunoblotting and enzyme-linked immunosorbent assay (ELISA) were used for parallel analysis of murine monoclonal antihuman IgG-subclass antisera (MoAbs). Coomassie Blue-stained protein bands in the pH region 5.5-8.0 were shown to be murine IgG by direct blotting onto nitrocellulose followed by detection with conjugated antimouse IgG. Use of IgG myeloma antigen-coated nitrocellulose in the IEF-affinity immunoblot allowed detection of the charge microheterogeneity of MoAbs. The MoAb group contained one to five major dense bands flanked by up to four minor fainter bands, all with pIs ranging from 6.1 to 7.8. Semiquantitative estimates of binding specificity in the IEF-affinity blot compared well with cross-reactivity data obtained from a quantitative ELISA.

Hamilton, Robert G.↗

Affinity Electrophoresis Using Ligands Attached To Polymers

In new technique, reduction of electrophoretic mobilities by addition of polyethylene glycol to ligands increases electrophoretic separabilities. In immuno-affinity electrophoresis, modification of ligands extends specificity of electrophoretic separation to particles having surface electric-charge structures otherwise making them electrophoretically inseparable. Modification of antibodies by polyethylene glycol greatly reduces ability to aggregate while enhancing ability to affect electrophoretic mobilities of cells. In hydrophobic-affinity electrophoresis, addition of polyethylene glycol reduces tendency toward aggregation of cells or macromolecules.

Van Alstine, James M.↗

On the affinities of lambda 5778 and other broad diffuse interstellar bands

The authors examined the broad band 5778 A because of the quantity and quality of data that exists in literature. To investigate the affinity of that band with the bands of Family 1, the ratio W(sub lambda)(4430)/W(sub lambda)(5797) was formed. If the two band belong to the same family then the ratio should be a constant from star to star and it should not be possible to find an independent variable with which the ratio is correlated. If, however, a variable is found which does produce a statistically significant correlation with the ratio of equivalent widths then the bands cannot be in the same family. To test the affinity of the band at 5778 A with the other families the procedure was repeated using the bands at 5780 and 5787 A as being representative of Families 2 and 3 respectively. The measurement results of this test are shown using 21 stars taken from Herbig. Statistically significant correlations resulted when the band at 5778 A was tested against the bands of Families 1 and 2 but there was no correlation with Family 3. It is concluded that lambda 5778 is unlikely a member of Family 1 and so all the broad bands do not have their origin in a single carrier. Also, lambda 5778 does not appear to be a member of Family 2 either, but may be a member of Family 3. It appears that either a single carrier can be the origin of both broad and narrow bands or that the bands are produced by different carriers which exist in similar interstellar habitats. This latter possibility would require the introduction of a fourth family of bands.

Mcintosh, Alan↗