Airborne Algae: A Rising Public Health Risk
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63 RADIATION, THERMAL, AND OTHER ENVIRON. POLLUTAN↗
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New algae mapping technique by the use of an airborne laser fluorosensor.
An airborne laser fluorosensor for the detection of algae in the sea has been developed. The system transmits dye laser radiation at 590 nm and monitors the fluorescent emission at 685 nm from chlorophyll-a bearing microorganisms. The system was successfully flown over the test areas of Lake Ontario and Chesapeake Bay. The device is sensitive to a fraction of mg/cu-M chlorophyll-a density in the water from an altitude of 30 m.
Kim, H. H.↗
Summer research fellowship program
Significant accomplishments reported include uniaxial compression tests of high strength graphite-epoxy laminates. The results show that Young's modulus and fracture stress depend upon the specimen's dimensions. Also presented are: an investigation of robot vision; estimation of spectral signatures of algae from the airborne lidar oceanographic probing equipment; impact tests on polymeric compounds; calibration of quartz crystal microbalance; and a profile of naturally occurring hydrocarbons.
Darden, G. C.↗
Clues to Coral Reef Health: Integrating Radiative Transfer Modeling and Hyperspectral Data
An important contribution to coral reef research is to improve spectral distinction between various health states of coral species in areas subject to harmful anthropogenic activity and climate change. New insights into radiative transfer properties of corals under healthy and stressed conditions can advance understandings of ecological processes on reefs and allow better assessments of the impacts of large-scale bleaching and disease events, Our objective was to examine the spectral and spatial properties of hyperspectral sensors that may be used to remotely sense changes in reef community health. We compare in situ reef environment spectra (healthy coral, stressed coral, dead coral, algae, and sand) with airborne hyperspectral data to identify important spectral characteristics and indices. Additionally, spectral measurements over a range of water depths, relief, and bottom types are compared to help quantify bottom-water column influences. In situ spectra were collected in July and August 2002 at the Long Rock site in the Andros Island, Bahamas coastal zone coral reef. Our primary emphasis was on Acropora palmata (or elkhorn coral), a major reef building coral, which is prevalent in the study area, but is suffering from white band disease. A. palmata is currently being, proposed as an endangered species because its populations have severely declined in many areas of the Caribbean. In addition to the A. palmata biotope, we have collected spectra of at least seven other coral biotopes that exist within the study area, each with different coral community composition, density of corals, relief, and size of corals. Coral spectral reflectance was then input into a radiative transfer model, CORALMOD (CM1), which is based on a leaf radiative transfer model. In CM1, input coral reflectance measurements produce modeled reflectance through an inversion at each visible wavelength to provide the absorption spectrum. Initially, we imposed a scattering baseline that is the same regardless of the coral condition and that coral is optically thick and no light is transmitted through coral. Here we will focus on methodology, experimental design, and initial findings of the in situ spectral measurements and preliminary output from the radiative transfer model.
Guild, Liane↗
Airborne Hyperspectral Imaging Studies of Harmful Algal Blooms
Algae monitoring of the great lakes by NASA GRC researchers.
optics↗
Multiwavelength LIDAR for remote sensing of chlorophyll A in algae and phytoplankton
A theoretical and experimental analysis of laser induced fluorescence for remote detection of chlorophyll A in living algae and phytoplankton is presented. The fluorescent properties of various species of algae representative of the different color groups are described. Laboratory measurements of fluorescent scattering cross sections is discussed and quantitive data presented. A scattering matrix model is developed to demonstrate the essential requirement of multiwavelength laser excitation in order to make accurate quantitative measurements of chlorophyll A concentration when more than one color group of algae is present in the water. A practical airborne laser fluorosensor design is considered and analysis of field data discussed. Successful operation of the Langley ALOPE (airborne LIDAR oceanographic probing experiment) system is described and field measurements presented. Accurate knowledge of alpha, the optical attenuation coefficient of the water, is shown to be essential for quantitative analysis of chlorophyll A concentration. The feasibility of remotely measuring alpha by laser radar is discussed.
Mumola, P. B.↗
Life After Launch: A Snapshot of the First 6 Months of NASA’s Plankton, Aerosol, Cloud, ocean Ecosystem (PACE) Mission
The NASA Plankton, Aerosol, Cloud, ocean Ecosystem (PACE) mission launched from Kennedy Space Center in the early morning of February 8, 2024. Just 63 days later, data from NASA’s newest Earth-observing satellite became available to the public. These data will extend and improve upon NASA’s 20+ years of global satellite observation of our living oceans, atmospheric aerosols, and cloud and initiate an advanced set of climate-relevant data records. Ultimately, PACE is the first mission to provide daily, global measurements that will enable prediction of the “boom-bust” cycle of fisheries, the appearance of harmful algae, and other factors that affect commercial and recreational industries. PACE also observes clouds and tiny airborne particles known as aerosols that influence air quality and absorb and reflect sunlight, thus warming and cooling the atmosphere. In the months since launch and initial data release, the PACE Project pursued instrument temporal and system vicarious calibrations, executed cross-instrument comparisons, conducted performance assessments, explored synergies with other missions, and released advanced science data products. In parallel, the PACE Validation Science Team left for the field and the Post-launch Airborne eXperiment (PACE-PAX) prepared for its mission. And, most importantly, preliminary science results were realized. Here, we present a snapshot of these activities and their impacts and outcomes, encompassing the first half year of the PACE mission.
PACE↗
Remote sensing of phytoplankton density and diversity in Narragansett Bay using an airborne fluorosensor
An aircraft-borne remote system is presented that utilizes narrow-band light from multiple dye lasers to excite selected algae photopigments and then measures the resultant flourescence emitted from chlorophyll a at 685 nm. Tests were conducted with both pure and mixed cultures of marine algae from a series of field tests taken from piers and bridges of Narragansett Bay, and a prototype remote fluorosensor was flown over the Bay during the 1978 winter-spring diatom bloom. Remote fluorescence obtained at hover points over sea-truth stations showed correlations with in situ fluorescence, total chlorophyll a, and cell count. It was concluded that the ratio of remote fluorescence to direct chlorophyll a concentration was less variable than expected, and the distribution of total chlorophyll a between two major photoplankton color groups showed three distinct areas, within the Bay, of green and golden-brown species.
Farmer, F. H.↗
Algal Accessory Pigment Detection Using AVIRIS Image-Derived Spectral Radiance Data
Visual and derivative analyses of AVIRIS spectral data can be used to detect algal accessory pigments in aquatic communities. This capability extends the use of remote sensing for the study of aquatic ecosystems by allowing detection of taxonomically significant pigment signatures which yield information about the type of algae present. Such information allows remote sensing-based assessment of aquatic ecosystem health, as in the detection of nuisance blooms of cyanobacteria or toxic blooms of dinoflagellates. Remote sensing of aquatic systems has traditionally focused on quantification of chlorophyll a, a photoreactive (and light-harvesting) pigment which is common to all algae as well as cyanobacteria (bluegreen algae). Due to the ubiquitousness of this pigment within algae, chl a is routinely measured to estimate algal biomass both during ground-truthing and using various airborne or satellite based sensors, including AVIRIS. Within the remote sensing and aquatic sciences communities, ongoing research has been performed to detect algal accessory pigments for assessment of algal population composition. This research is based on the fact that many algal accessory pigments are taxonomically significant, and all are spectrally unique. Aquatic scientists have been refining pigment analysis techniques, primarily high performance liquid chromatography, or HPLC, to detect specific pigments as a time-saving alternative to individual algal cell identifications and counts. Remote sensing scientists are investigating the use of pigment signatures to construct pigment libraries analogous to mineral spectral libraries used in geological remote sensing applications. The accessory pigment approach has been used successfully in remote sensing using data from the Thematic Mapper, low-altitude, multiple channel scanners, field spectroradiometers and the AVIRIS hyperspectral scanner. Due to spectral and spatial resolution capabilities, AVIRIS is the sensor of choice for such studies. We present here our results on detection of algal accessory pigments using AVIRIS data.
Richardson, Laurie L.↗
Lidar: A laser technique for remote sensing
Experimental airborne lidar systems proved to be useful for shallow water bathymetric measurements, and detection and identification of oil slicks and algae. Dye fluorescence applications using organic dyes was studied. The possibility of remotely inducing dye flourescence by means of pulsed lasers opens up several hydrospheric applications for measuring water currents, water temperature, and salinity. Aerosol measurements by lidar are also discussed.
Wilkerson, T. D.↗
The influence of multiple groups of biological ice nucleating particles on microphysical properties of mixed-phase clouds observed during MC3E
Abstract. A new empirical parameterization (EP) for multiple groups of primary biological aerosol particles (PBAPs) is implemented in the aerosol–cloud model (AC) to investigate their roles as ice nucleating particles (INPs). The EP describes the heterogeneous ice nucleation by (1) fungal spores, (2) bacteria, (3) pollen, (4) detritus of plants, animals, and viruses, and (5) algae. Each group includes fragments from the originally emitted particles. A high-resolution simulation of a midlatitude mesoscale squall line by AC is validated against airborne and ground observations. Sensitivity tests are carried out by varying the initial vertical profiles of the loadings of individual PBAP groups. The resulting changes in warm and ice cloud microphysical parameters are investigated. The changes in warm microphysical parameters, including liquid water content and cloud droplet number concentration, are minimal (<10 %). Overall, PBAPs have little effect on the ice number concentration (<6 %) in the convective region. In the stratiform region, increasing the initial PBAP loadings by a factor of 1000 resulted in less than 40 % change in ice number concentrations. The total ice concentration is mostly controlled by various mechanisms of secondary ice production (SIP). However, when SIP is intentionally shut down in sensitivity tests, increasing the PBAP loading by a factor of 100 has an effect of less than 3 % on the ice phase. Further sensitivity tests revealed that PBAPs have little effect on surface precipitation and on the shortwave and longwave flux (<4 %) for a 100-fold perturbation in PBAPs.
54 ENVIRONMENTAL SCIENCES↗
Satellite and airborne remote sensing of gross primary productivity in boreal Alaskan lakes
In terrestrial and marine ecosystems, remote sensing has been used to estimate gross primary productivity (GPP) for decades, but few applications exist for shallow freshwater ecosystems.Here we show field-based GPP correlates with satellite and airborne lake color across a range of optically and limnologically diverse lakes in interior Alaska. A strong relationship between in situ GPP derived from stable oxygen isotopes (δ18O) and space-based lake color from satellites (e.g. Landsat-8, Sentinel-2 and CubeSats) and airborne imagery (AVIRIS-NG) demonstrates the potential power of this technique for improving spatial and temporal monitoring of lake GPP when coupled with additional field validation measurements across different systems. In shallow waters clear enough for sunlight to reach lake bottoms, both submerged vegetation (macrophytes and algae) and phytoplankton likely contribute to GPP. The stable isotopes and remotely sensed shallow lake color used here integrate both components. These results demonstrate the utility of lake color as a feasible means for mapping lake GPP from remote sensing. This novel methodology estimates GPP from remote sensing in shallow lakes by combining field measurements of oxygen isotopes with airborne, satellite and CubeSat imagery. This use of lake color for providing insight into ecological processes of shallow lakes is recommended, especially for remote arctic and boreal landscapes.
airborne remote sensing↗
Laser-fluorescence measurement of marine algae
Progress in remote sensing of algae by laser-induced fluorescence is subject of comprehensive report. Existing single-wavelength and four-wavelength systems are reviewed, and new expression for power received by airborne sensor is derived. Result differs by as much as factor of 10 from those previously reported. Detailed error analysis evluates factors affecting accuracy of laser-fluorosensor systems.
Browell, E. V.↗
Recent progress in the hydrographic applications of a N2/Ne laser
Laboratory and field measurements have been performed on the transmission/scattering characteristics of a pulsed neon laser as a function of water turbidity. These results have been used to establish the criteria for an airborne laser bathymetry system. Extensive measurements have been made of laser induced fluorescence using a pulsed tunable dye laser. Feasibility has been demonstrated for remote detection and possible identification of various types of algae and oils. Similar measurements made on a wide variety of organic dyes have shown this technique to have applications in remote measurement of subsurface currents, temperature, and salinity.
Hickman, G. D.↗
Recent advances in the applications of pulsed lasers in the hydrosphere
Laboratory and field measurements have been performed on the transmission/scattering characteristics of a pulsed neon laser as a function of water turbidity. These results have been used to establish the criteria for an airborne laser bathymetry system. Extensive measurements have been made of laser induced fluorescence using a pulsed tunable dye laser. Feasibility has been demonstrated for remote detection and possible identification of various types of algae and oils. Similar measurements made on a wide variety of organic dyes have shown this technique to have applications in remote measurements of subsurface currents, temperature and salinity.
Hickman, G. D.↗
JOVE Program
Coastal reef degradation and widespread bleaching of corals, i.e. loss of pigments and/or symbiotic zooxanthellae, is increasing globally. Remote sensing has great potential for assessing the extent of reef change. However, measuring reef change from remote platforms (boats, aircraft or satellites), requires ground-truth spectral algorithms characteristic of healthy and degraded reef populations. Our laboratory experiments demonstrated, for the first time, that healthy coral colonies emit characteristic fluorescence spectra in response to excitation with short wavelength (blue or ultraviolet) light. Furthermore, following stress, e.g. increased temperature, corals lose symbiotic algae and their health is compromised. We measured changes in coral fluorescence spectra along with pigment loss in response to temperature-induced stress. Following laboratory demonstration, we tested this approach in the field. The NASA P3 aircraft with the airborne oceanographic LIDAR system was used to map transects of coral reef in Hawaii. Ground truth samples of coral; were collected and analyzed for pigment density (pigments/surface area). Fluorescence spectra along transects showed consistent chlorophyll fluorescence peaks at 685 nm from the chlorophyll of the zooxanthellae and peaks between 400 and 570 nm believed to emanate from the coral tissue. Our results suggest that remote sensing of laser-induced fluorescence represents an efficient and effective approach to monitoring the health of coral reefs. Lists of papers, conferences, proposals awarded and a summary of student involvement is included in the appendices.
Hardy, John T.↗
Application of a pulsed laser for measurements of bathymetry and algal fluorescence.
The technique of measuring water depths with an airborne pulsed dye laser is studied, with emphasis on the degrading effect of some environmental and operational parameters on the transmitted and reflected laser signals. Extrapolation of measurements of laser stimulated fluorescence, performed as a function of both the algal cell concentration and the distance between the algae and the laser/receiver, indicate that a laser system operating from a height of 500 m should be capable of detecting chlorophyll concentrations as low as 1.0 mg/cu m.-
Hickman, G. D.↗
Great Lakes Hyperspectral Water Quality Instrument Suite for Airborne Monitoring of Algal Blooms
NASA Glenn Research Center and NOAA Great Lakes Environmental Research Lab are collaborating to utilize an airborne hyperspectral imaging sensor suite to monitor Harmful Algal Blooms (HABs) in the western basin of Lake Erie. The HABs are very dynamic events as they form, spread and then disappear within a 4 to 8 week time period in late summer. They are a concern for human health, fish and wildlife because they can contain blue green toxic algae. Because of this toxicity there is a need for the blooms to be continually monitored. This situation is well suited for aircraft based monitoring because the blooms are a very dynamic event and they can spread over a large area. High resolution satellite data is not suitable by itself because it will not give the temporal resolution due to the infrequent overpasses of the quickly changing blooms. A custom designed hyperspectral imager and a point spectrometer mounted on aT 34 aircraft have been used to obtain data on an algal bloom that formed in the western basin of Lake Erie during September 2006. The sensor suite and operations will be described and preliminary hyperspectral data of this event will be presented
Lekki, John↗