Synchronous and Asynchronous Time Integration for Multiscale Simulations Using Hybridized Finite Element Methods.
Abstract not provided.
Reuter, Bryan↗
SEARCH · Search NASA
Results for “asynchronous time integration”
Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.
Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.
Asynchronous space–time domain decomposition method with localized uncertainty quantification
The computational cost associated with uncertainty quantification of engineering problems featuring localized phenomenon can be reduced by confining the random variability of the model parameters within a region of interest. Here in this case, a localized treatment of mesh and time resolutions is required to capture the effect of the confined material uncertainty on the global response. We present a computational approach for localized uncertainty quantification with the capability of asynchronous treatment of mesh and time resolutions. In particular, we allow each subdomain to have its local uncertainty representation and the corresponding mesh and time resolutions. As a result, computing resources can be directed toward a small region of interest where a model with high spatial and temporal resolutions is required. To verify the numerical implementation, we consider elastic wave propagation in an axially loaded beam. Moreover, we perform convergence studies with respect to the spatial and temporal discretizations as well as the size of an uncertain subdomain. A projectile impacting a composite sandwich plate is considered as an engineering application for the proposed method.
42 ENGINEERING↗
Pace OCI Crosstalk Characterization Based on Pre-Launch Testing
Scheduled to launch in 2024, the Ocean Color Instrument (OCI) onboard the Plankton, Aerosol, Cloud, ocean Ecosystem (PACE) mission will collect hyperspectral data from 315 nm – 895 nm via two grating spectrometers (in both the blue and red spectral regions) and 9 multi-spectral bands in the short-wave infrared (940 nm – 2260 nm). The increased spectral resolution and radiometric accuracy is expected to improve upon data collected by heritage sensors such as SeaWiFs, MODIS, and VIIRS, allowing new applications in ocean color, aerosol, and cloud science. During ground testing, higher than expected spatial-spectral crosstalk was measured for the hyperspectral bands in the blue spectrograph. Using a monochromatic-collimated light source, light from a single science pixel (1km x 1km) was found to produce crosstalk signals over 31 pixels in the cross-track direction. This spatial augmentation is caused by the spectral crosstalk’s asynchronous spatial movement during Time Delay Integration (TDI). To fully characterized the magnitude and spectral dependency from this, a crosstalk model was developed by synthesizing data collected from monochromatic-collimated light and monochromatic light that filled the OCI optical aperture. The model was validated by showing good agreement between predicted values and other relevant test data collected using both monochromatic and white light sources.
PACE↗
XBoard: A Framework for Integrating and Enhancing Collaborative Work Practices
Teams typically collaborate in different modes including face-to-face meetings, meetings that are synchronous (i. e. require parties to participate at the same time) but distributed geographically, and meetings involving asynchronously working on common tasks at different times. The XBoard platform was designed to create an integrated environment for creating applications that enhance collaborative work practices. Specifically, it takes large, touch-screen enabled displays as the starting point for enhancing face-to-face meetings by providing common facilities such as whiteboarding/electronic flipcharts, laptop projection, web access, screen capture and content distribution. These capabilities are built upon by making these functions inherently distributed by allowing these sessions to be easily connected between two or more systems at different locations. Finally, an information repository is integrated into the functionality to provide facilities for work practices that involve work being done at different times, such as reports that span different shifts. The Board is designed to be extendible allowing customization of both the general functionality and by adding new functionality to the core facilities by means of a plugin architecture. This, in essence, makes it a collaborative framework for extending or integrating work practices for different mission scenarios. XBoard relies heavily on standards such as Web Services and SVG, and is built using predominately Java and well-known open-source products such as Apache and Postgres. Increasingly, organizations are geographically dispersed, and rely on "virtual teams" that are assembled from a pool of various partner organizations. These organizations often have different infrastructures of applications and workflows. The XBoard has been designed to be a good partner in these situations, providing the flexibility to integrate with typical legacy applications while providing a standards-based infrastructure that is readily accepted by most organizations. The XBoard has been used on the Mars Exploration Rovers mission at JPL, and is currently being used or considered for use in pilot projects at Johnson Space Center (JSC) Mission Control, the University of Arizona Lunar and Planetav Laboratory (Phoenix Mars Lander), and MBART (Monterey Bay Aquarium Research Institute).
Shab, Ted↗
Quinoa, Version 0.2
Quinoa is a set of computational tools that enables research and numerical analysis in fluid dynamics. At this time it remains a test-bed to experiment with various algorithms using fully asynchronous runtime systems. Currently, Quinoa consists of the following tools: (1) Walker, a numerical integrator for systems of stochastic differential equations in time. It is a mathematical tool to analyze and design the behavior of stochastic differential equations. It allows the estimation of arbitrary coupled statistics and probability density functions and is currently used for the design of statistical moment approximations for multiple mixing materials in variable-density turbulence. (2) Inciter, an overdecomposition-aware finite element field solver for partial differential equations using 3D unstructured grids. Inciter is used to research asynchronous mesh-based algorithms and to experiment with coupling asynchronous to bulk-synchronous parallel code. Two planned new features of Inciter, compared to the previous release (LA-CC-16-015), to be implemented in 2017, are (a) a simple Navier-Stokes solver for ideal single-material compressible gases, and (b) solution-adaptive mesh refinement (AMR), which enables dynamically concentrating compute resources to regions with interesting physics. Using the NS-AMR problem we plan to explore how to scale such high-load-imbalance simulations, representative of large production multiphysics codes, to very large problems on very large computers using an asynchronous runtime system. (3) RNGTest, a test harness to subject random number generators to stringent statistical tests enabling quantitative ranking with respect to their quality and computational cost. (4) UnitTest, a unit test harness, running hundreds of tests per second, capable of testing serial, synchronous, and asynchronous functions. (5) MeshConv, a mesh file converter that can be used to convert 3D tetrahedron meshes from and to either of the following formats: Gmsh, http://www.geuz.org/gmsh, Netgen, http://sourceforge.net/apps/mediawiki/netgen-mesher, ExodusII, http://sourceforge.net/projects/exodusii, HyperMesh, http://www.altairhyperworks.com/product/HyperMesh.
Bakosi, Jozsef↗
Performance analysis of Integrated Communication and Control System networks
This paper presents statistical analysis of delays in Integrated Communication and Control System (ICCS) networks that are based on asynchronous time-division multiplexing. The models are obtained in closed form for analyzing control systems with randomly varying delays. The results of this research are applicable to ICCS design for complex dynamical processes like advanced aircraft and spacecraft, autonomous manufacturing plants, and chemical and processing plants.
Halevi, Y.↗
Multi-star processing and gyro filtering for the video inertial pointing system
The video inertial pointing (VIP) system is being developed to satisfy the acquisition and pointing requirements of astronomical telescopes. The VIP system uses a single video sensor to provide star position information that can be used to generate three-axis pointing error signals (multi-star processing) and for input to a cathode ray tube (CRT) display of the star field. The pointing error signals are used to update the telescope's gyro stabilization system (gyro filtering). The CRT display facilitates target acquisition and positioning of the telescope by a remote operator. Linearized small angle equations are used for the multistar processing and a consideration of error performance and singularities lead to star pair location restrictions and equation selection criteria. A discrete steady-state Kalman filter which uses the integration of the gyros is developed and analyzed. The filter includes unit time delays representing asynchronous operations of the VIP microprocessor and video sensor. A digital simulation of a typical gyro stabilized gimbal is developed and used to validate the approach to the gyro filtering.
Murphy, J. P.↗
Efficient Asynchronous I/O with Request Merging
With the advancement of exascale computing, the amount of scientific data is increasing day by day. Efficient data access is necessary for scientific discoveries. Unfortunately, the I/O performance is not improved, like the CPU and network speed. So, I/O operations take longer time than data generation or analysis. Asynchronous I/O has been proposed to extenuate the I/O bottleneck by overlapping I/O and computation time. However, multiple small write operations can diminish the benefits of asynchronous I/O, as the I/O time becomes significantly longer than the compute time, with little time to overlap with. To overcome these issues, we present an optimization technique to merge small contiguous write operations. We integrated our solution into the HDF5 asynchronous I/O VOL connector and demonstrated the effectiveness of merging HDF5 write operations automatically and transparently without requiring any code change from the application.
Chowdhury, Kamal Hossain↗
Real Time Phasor Analytics (RTPA) and RTPA-SCR System Strength Online Tool
This presentation showcases the Real-Time Phasor Analytics (RTPA) framework for monitoring inertia and assessing system strength in power grids. RTPA is an open-source tool designed to standardize access to data from Power Management Units (PMUs) and Phasor Data Concentrators (PDCs). It facilitates real-time connectivity to multiple PDCs in accordance with the IEEE C37.118-2 standard and supports asynchronous data stream integration. Additionally, RTPA can simulate a PDC server streaming C37.118-2 data and provides Python bindings for seamless interaction with the framework, eliminating the need for direct Rust programming.
24 POWER TRANSMISSION AND DISTRIBUTION↗
Myna: Connecting powder bed fusion build data to simulation tools for digital twin applications
Additive manufacturing (AM), as a digital process, can generate a detailed digital thread linking a part’s design and manufacturing to its operational performance. As AM systems advance, an increasing amount of process data is stored in manufacturing databases. In principle, this data can be utilized by simulation-based digital twin approaches, such as real-time process control and asynchronous post-processing guidance. However, few tools currently exist for systematically integrating digital thread data with computational tools. Here, in this study, we propose a software package, called Myna, for connecting data from powder bed fusion processes to simulation tools. The utility of such a platform is demonstrated using build data from the Oak Ridge National Laboratory Manufacturing Demonstration Facility “Peregrine v2023-10” public dataset to automatically configure and run 54 semi-analytical 3DThesis melt pool simulations, 78 numerical Additive FOAM melt pool simulations, and 3 ExaCA microstructure simulations. The simulated, spatially registered microstructures are then compared directly with electron backscatter diffraction characterization of the corresponding as-built part locations. The resulting simulated microstructure showed variation as a function of process parameters, particularly stripe width; however, the experimental data had little variation between the microstructure texture and grain size resulting from different processing conditions. Analysis of the discrepancies suggest that it is possible a two-phase ferritic-austenitic solidification model is needed to accurately predict grain size and texture for certain stainless steel 316L feedstock compositions under powder bed fusion conditions, providing direction for future research. As illustrated here, due to the number and complexity of the simulations involved in AM process-structure–property predictions, automated methods to connect process data and simulations will remain necessary tools for testing hypotheses and implementing digital twin applications.
Knapp, Gerald L. [Oak Ridge National Laboratory (O↗
Graph-based Reversible Evaluation and Tangents Library
GRETL is a C++ library for evaluation, re-evaluation and algorithmic differentiation of functional operations on an arbitrary computational graph with limited memory usage. Similar to popular machine learning frameworks in Python, like PyTorch and JAX, it tracks and stores both operations and output data as functions are evaluated. Once this composition of functions is built up, the entire chain of operations can be back propagated to compute sensitivities of the final result with respect to any number of inputs. In contrast to most machine learning applications, memory usage becomes the bottleneck for back propagation in many physics applications, especially for time-dependent PDEs. Dynamic check pointing becomes essential. An important distinguishing feature of GRETL is its ability to limit the maximum memory usage by automatically dynamic checkpointing the data output for each graph operation (see Wang, Moin, Iaccarino, 2009). During backpropagation, parts of the graph that are no longer in memory are automatically re-evaluated from upstream checkpointed states as needed for derivative sensitivity calculations (or more precisely, for vector-Jacobian products). GRETL is particularly beneficial for applications, such as coupled multi-physics, where deriving adjoint-based sensitivities and managing checkpoint memory across modules becomes onerous. Cases which can be readily handled by the GRETL library include: different time-integration algorithms per physics (e.g., coupled predictor-corrector algorithms, IMEX, etc.), sub-cycling, asynchronous integrators, state dependent timestep sizes, iterative solvers and coupling algorithms, controller algorithms, and more.
Tupek, MichaelR [Lawrence Livermore National Labor↗
Beam Synchronous for the Rest of Us!
Fermilab’s Tevatron Clock (TCLK) infrastructure has been an integral part of the accelerator control network since the 1980’s. This 10MHz Manchester encoded protocol has enabled flexible, real-time event distribution for thousands of devices connected to the timing network with a high degree of reliability. Forthcoming upgrades to the Fermilab complex (PIP-II, LBNF, ACORN) necessitate higher levels of precision to maintain inter-bunch timing for Instrumentation and Control purposes. This presents as an opportunity to refine the event distribution protocol for tighter synchronization between machines, experiments, and eventually far-site operations. This paper outlines a method by which beam-synchronous events may be distributed through asynchronous serial protocols via integration with local LLRF and global PPS reference signals. This method is ideal for synchrotron machines with aggressive frequency sweeps (such as Fermilab's 38~53MHz Booster) and allows for precision timing to be maintained across machines without specialized hardware.
43 PARTICLE ACCELERATORS↗
Breaking the Million-Electron and 1 EFLOP/s Barriers: Biomolecular-Scale Ab Initio Molecular Dynamics Using MP2 Potentials
The accurate simulation of complex biochemical phenomena has historically been hampered by the computational requirements of high-fidelity molecular-modeling techniques. Quantum mechanical methods, such as ab initio wave-function (WF) theory, deliver the desired accuracy, but have impractical scaling for modeling biosystems with thousands of atoms. Combining molecular fragmentation with MP2 perturbation theory, this study presents an innovative approach that enables biomolecular-scale ab initio molecular dynamics (AIMD) simulations at WF theory level. Leveraging the resolution-of-the-identity approximation for Hartree-Fock and MP2 gradients, our approach eliminates computationally intensive four-center integrals and their gradients, while achieving near-peak performance on modern GPU architectures. The introduction of asynchronous time steps minimizes time step latency, overlapping computational phases and effectively mitigating load imbalances. Utilizing up to 9,400 nodes of Frontier and achieving 59% (1006.7 PFLOP/s) of its double-precision floating-point peak, our method enables us to break the million-electron and 1EFLOP/s barriers for AIMD simulations with quantum accuracy.
Kurzak, Jakub↗
Finite-dimensional modeling of network-induced delays for real-time control systems
In integrated control systems (ICS), a feedback loop is closed by the common communication channel, which multiplexes digital data from the sensor to the controller and from the controller to the actuator along with the data traffic from other control loops and management functions. Due to asynchronous time-division multiplexing in the network access protocols, time-varying delays are introduced in the control loop, which degrade the system dynamic performance and are a potential source of instability. The delayed control system is represented by a finite-dimensional, time-varying, discrete-time model which is less complex than the existing continuous-time models for time-varying delays; this approach allows for simpler schemes for analysis and simulation of the ICS.
Ray, Asok↗
Method and Apparatus for Automated Isolation of Nucleic Acids from Small Cell Samples
RNA isolation is a ubiquitous need, driven by current emphasis on microarrays and miniaturization. With commercial systems requiring 100,000 to 1,000,000 cells for successful isolation, there is a growing need for a small-footprint, easy-to-use device that can harvest nucleic acids from much smaller cell samples (1,000 to 10,000 cells). The process of extraction of RNA from cell cultures is a complex, multi-step one, and requires timed, asynchronous operations with multiple reagents/buffers. An added complexity is the fragility of RNA (subject to degradation) and its reactivity to surface. A novel, microfluidics-based, integrated cartridge has been developed that can fully automate the complex process of RNA isolation (lyse, capture, and elute RNA) from small cell culture samples. On-cartridge cell lysis is achieved using either reagents or high-strength electric fields made possible by the miniaturized format. Traditionally, silica-based, porous-membrane formats have been used for RNA capture, requiring slow perfusion for effective capture. In this design, high efficiency capture/elution are achieved using a microsphere-based "microfluidized" format. Electrokinetic phenomena are harnessed to actively mix microspheres with the cell lysate and capture/elution buffer, providing important advantages in extraction efficiency, processing time, and operational flexibility. Successful RNA isolation was demonstrated using both suspension (HL-60) and adherent (BHK-21) cells. Novel features associated with this development are twofold. First, novel designs that execute needed processes with improved speed and efficiency were developed. These primarily encompass electric-field-driven lysis of cells. The configurations include electrode-containing constructs, or an "electrode-less" chip design, which is easy to fabricate and mitigates fouling at the electrode surface; and the "fluidized" extraction format based on electrokinetically assisted mixing and contacting of microbeads in a shape-optimized chamber. A secondary proprietary feature is in the particular layout integrating these components to perform the desired operation of RNA isolation. Apart from a novel functional capability, advantages of the innovation include reduced or eliminated use of toxic reagents, and operator-independent extraction of RNA.
Sundaram, Shivshankar↗
Enabling Modular Autonomous Feedback‐Loops in Materials Science through Hierarchical Experimental Laboratory Automation and Orchestration
Abstract Materials acceleration platforms (MAPs) operate on the paradigm of integrating combinatorial synthesis, high‐throughput characterization, automatic analysis, and machine learning. Within a MAP, one or multiple autonomous feedback loops may aim to optimize materials for certain functional properties or to generate new insights. The scope of a given experiment campaign is defined by the range of experiment and analysis actions that are integrated into the experiment framework. Herein, the authors present a method for integrating many actions within a hierarchical experimental laboratory automation and orchestration (HELAO) framework. They demonstrate the capability of orchestrating distributed research instruments that can incorporate data from experiments, simulations, and databases. HELAO interfaces laboratory hardware and software distributed across several computers and operating systems for executing experiments, data analysis, provenance tracking, and autonomous planning. Parallelization is an effective approach for accelerating knowledge generation provided that multiple instruments can be effectively coordinated, which the authors demonstrate with parallel electrochemistry experiments orchestrated by HELAO. Efficient implementation of autonomous research strategies requires device sharing, asynchronous multithreading, and full integration of data management in experimental orchestration, which to the best of the authors’ knowledge, is demonstrated for the first time herein.
36 MATERIALS SCIENCE↗
On modeling of integrated communication and control systems
The mathematical modeling scheme proposed by Ray and Halevi (1988) for integrated communication and control systems is considered analytically, with an emphasis on the effect of introducing varying and distributed time delays to account for asynchronous time-division multiplexing in the communication part of the system. Ray and Halevi applied a state-transition concept to transform the original continuous-time model into a discrete-time model; the same approach was used by Kalman and Bertram (1959) to model various types of sampled data systems which are not subject to induced delays. The relationship between the two modeling schemes is explored, and it is shown that, although the Kalman-Bertram method has the advantage of a unified approach, it becomes inconvenient when varying delays appear in the control loop.
Liou, Luen-Woei↗
An Environment for Incremental Development of Distributed Extensible Asynchronous Real-time Systems
Incremental parallel development of distributed real-time systems is difficult. Architectural techniques and software tools developed at the Jet Propulsion Laboratory's (JPL's) Flight System Testbed make feasible the integration of complex systems in various stages of development.
flight system testbed real-time systems↗