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At least 19 records

A Scalable Semi-Implicit Barotropic Mode Solver for the MPAS-Ocean

A scalable semi-implicit barotropic mode solver for the ocean component of the model for prediction across scales has been implemented as a competitor to an existing explicit-subcycling scheme to allow faster and more stable simulations while not sacrificing accuracy. The semi-implicit solver adopts the pipelined preconditioned bi-conjugate gradient stabilization algorithm as an iterative solver in conjunction with the restricted additive Schwarz preconditioner that accelerates the convergence rate of the iterative solver. The preconditioner is constructed from a linearized barotropic system that also reorders the system for optimal performance, while the semi-implicit solver deals with the fully nonlinear barotropic system that requires reassembly of the coefficient matrix for every time step. Several numerical experiments, from simple one-dimensional tests to three-dimensional real-world tests, demonstrate that the semi-implicit solver has almost the same accuracy and better parallel scalability compared with the existing scheme while allowing faster and more stable simulations. Furthermore, the semi-implicit solver accelerates the barotropic mode up to 2.9 times faster than the existing scheme on 16,320 processors, leading to an overall runtime speedup of 1.9.

97 MATHEMATICS AND COMPUTING↗

An implicit barotropic mode solver for MPAS-ocean using a modern Fortran solver interface

Here, we demonstrate use of a modern Fortran solver interface to manage solver algorithms for an implicit barotropic mode solver in the Model for Predictions Across Scales-Ocean (MPAS-O). ForTrilinos, a Fortran interface to Trilinos that contains a large collection of solver capabilities written in C++, has been implemented in MPAS-O to provide access to a suite of linear solver options. By virtue of the simplified wrapper and interface generator (SWIG) automation tool that generates modern Fortran interfaces to C++ code, we were able to implement the Fortran solver interface in MPAS-O using a familiar Fortran coding style while minimizing performance degradation. The ForTrilinos solver interface is written within MPAS-O’s time stepping modules as a subroutine in conjunction with MPAS-O code. Applied to an idealized ocean and a high-resolution realistic ocean test case, parallel performance of ForTrilinos solvers is examined. It is found that parallel scalability of the ForTrilinos solvers is highly dependent on the number of global synchronization points per solver iteration in each iterative solver algorithm. ForTrilinos solvers perform best compared to the Fortran hand-crafted (FHC) solver when the amount of work per processor is large enough. However, parallel scalability is better with the FHC solver and so when the work per core is modest FHC outperforms ForTrilinos. The intercomparison between the ForTrilinos and FHC solvers reveals that this performance hit in the ForTrilinos solver mostly comes from the global synchronization process, while suggesting that the matrix-vector multiplication process in the FHC solver needs to be optimized for better performance.

97 MATHEMATICS AND COMPUTING↗

The barotropic normal modes in certain shear flows and the traveling waves in the atmosphere

It is shown analytically and numerically that in certain shear flows the linearized nondivergent barotropic vorticity equation has a limited number of neutral normal modes. The latitudinal structures of these shear flows can be expressed as polynomials of the sine of latitude. The first few such shear flows resemble the gross features of the zonal winds in the atmosphere of the earth at different times and altitudes. The spatial structures of the neutral normal modes in these shear flows are spherical harmonics, and, as a consequence, these modes are also the exact solutions of the fully nonlinear equation because the nonlinear interaction term vanishes identically. The spatial structures of the observed 5-, 4-, 2-, and 16-day free traveling waves in the atmosphere are often identified with the spherical harmonics with indices of (m, n) = ( 1, 2), (2, 3), (3, 3), and ( 1, 4), which are known previously as the neutral normal modes of the nondivergent barotropic vorticity equation in a motionless background state. Our results could explain why these free traveling waves can survive the shearing effects of zonal flows that are far different from rest because these spherical harmonics are also normal modes in certain shear flows that resemble the observations of the atmosphere.

Chen, Ping↗

Global energetics analysis using 3-dimensional normal mode decomposition

The Goddard Laboratory for Atmospheric Sciences (GLAS) analysis of the FGGE observations for a 25-day period in January 1979 is examined using the normal mode energetics scheme. The results from the energetics analysis are compared with the data of Tanaka (1985). Kinetic energy spectra of the barotropic mode in the meridional-mode and frequency domains, and the total diabatic process are studied. It is observed that there are significant differences between GLAS and GFDL analyses results in the barotropic energy of gravity modes and the normal energetics scheme is applicable as a diagnostic tool.

Tanaka, Hiroshi↗

Nonlinear Barotropic Instability in the Stratosphere

A number of linear studies suggest that some planetary scale waves in the stratosphere may arise from barotropic instability; the behavior of these barotropic modes at finite amplitudes has not previously been explored.

stratospheric winds barotropic instability↗

A normal-mode approach to Jovian atmospheric dynamic

A nonlinear, quasi-geostrophic, baroclinic model of Jovian atmospheric dynamics is proposed, in which vertical variations of velocity are represented by a truncated sum over a complete set of orthogonal functions obtained by a separation of variables of the linearized quasi-geostrophic potential vorticity equation. A set of equations for the time variation of the mode amplitudes in the nonlinear case is then derived. It is shown that, for a planet with a neutrally stable, fluid interior instead of a solid lower boundary, the barotropic mode represents motions in the interior, and is not affected by the baroclinic modes. One consequence of this is that a normal-mode model with one baroclinic mode is dynamically equivalent to a one-layer model with solid lower topography. It is also shown that, for motions in Jupiter's cloudy lower troposphere, the stratosphere behaves nearly as a rigid lid, so that the normal-mode is applicable to Jupiter. The accuracy of the normal-mode model for Jupiter is tested using the following simple problems: (1) forced, vertically propagating Rossby waves, using two and three baroclinic modes, and (2) baroclinic instability, using two baroclinic modes. It is found that the normal-mode model provides qualitatively correct results, even with only a very limited number of vertical degrees of freedom.

Achterberg, Richard K.↗

Adaptive Error Estimation in Linearized Ocean General Circulation Models

Data assimilation methods are routinely used in oceanography. The statistics of the model and measurement errors need to be specified a priori. This study addresses the problem of estimating model and measurement error statistics from observations. We start by testing innovation based methods of adaptive error estimation with low-dimensional models in the North Pacific (5-60 deg N, 132-252 deg E) to TOPEX/POSEIDON (TIP) sea level anomaly data, acoustic tomography data from the ATOC project, and the MIT General Circulation Model (GCM). A reduced state linear model that describes large scale internal (baroclinic) error dynamics is used. The methods are shown to be sensitive to the initial guess for the error statistics and the type of observations. A new off-line approach is developed, the covariance matching approach (CMA), where covariance matrices of model-data residuals are "matched" to their theoretical expectations using familiar least squares methods. This method uses observations directly instead of the innovations sequence and is shown to be related to the MT method and the method of Fu et al. (1993). Twin experiments using the same linearized MIT GCM suggest that altimetric data are ill-suited to the estimation of internal GCM errors, but that such estimates can in theory be obtained using acoustic data. The CMA is then applied to T/P sea level anomaly data and a linearization of a global GFDL GCM which uses two vertical modes. We show that the CMA method can be used with a global model and a global data set, and that the estimates of the error statistics are robust. We show that the fraction of the GCM-T/P residual variance explained by the model error is larger than that derived in Fukumori et al.(1999) with the method of Fu et al.(1993). Most of the model error is explained by the barotropic mode. However, we find that impact of the change in the error statistics on the data assimilation estimates is very small. This is explained by the large representation error, i.e. the dominance of the mesoscale eddies in the T/P signal, which are not part of the 21 by 1" GCM. Therefore, the impact of the observations on the assimilation is very small even after the adjustment of the error statistics. This work demonstrates that simult&neous estimation of the model and measurement error statistics for data assimilation with global ocean data sets and linearized GCMs is possible. However, the error covariance estimation problem is in general highly underdetermined, much more so than the state estimation problem. In other words there exist a very large number of statistical models that can be made consistent with the available data. Therefore, methods for obtaining quantitative error estimates, powerful though they may be, cannot replace physical insight. Used in the right context, as a tool for guiding the choice of a small number of model error parameters, covariance matching can be a useful addition to the repertory of tools available to oceanographers.

Chechelnitsky, Michael Y.↗

Global Barotropic Tide Modeling Using Inline Self‐Attraction and Loading in MPAS‐Ocean

Abstract We examine ocean tides in the barotropic version of the Model for Prediction Across Scales (MPAS‐Ocean), the ocean component of the Department of Energy Earth system model. We focus on four factors that affect tidal accuracy: self‐attraction and loading (SAL), model resolution, details of the underlying bathymetry, and parameterized topographic wave drag. The SAL term accounts for the tidal loading of Earth's crust and the self‐gravitation of the ocean and the load‐deformed Earth. A common method for calculating SAL is to decompose mass anomalies into their spherical harmonic constituents. Here, we compare a scalar SAL approximation versus an inline SAL using a fast spherical harmonic transform package. Wave drag accounts for energy lost by breaking internal tides that are produced by barotropic tidal flow over topographic features. We compare a series of successively finer quasi‐uniform resolution meshes (62.9, 31.5, 15.7, and 7.87 km) to a variable resolution (45 to 5 km) configuration. We ran MPAS‐Ocean in a single‐layer barotropic mode forced by five tidal constituents. The 45 to 5 km variable resolution mesh obtained the best total root‐mean‐square error (5.4 cm) for the deep ocean ( 1,000 m) tide compared to TPXO8 and ran twice as fast as the quasi‐uniform 8 km mesh, which had an error of 5.8 cm. This error is comparable to those found in other forward (non‐assimilative) ocean tide models. In future work, we plan to use MPAS‐Ocean to study tidal interactions with other Earth system components, and the tidal response to climate change.

54 ENVIRONMENTAL SCIENCES↗

Motions in the interiors and atmospheres of Jupiter and Saturn. II - Barotropic instabilities and normal modes of an adiabatic planet

A rotating and adiabatic inviscid fluid planet possesses low frequency motions that are barotropic, quasi-geostrophic and quasi-columnar. The limiting curvature at which flow becomes unstable upon projection onto the planetary surface is negative, with an amplitude that is 3-4 times that for thin atmospheres, in planets in which density linearly decreases to zero at the surface. This result is shown to hold for all quasi-columnar perturbations. Both the phase speed of the normal mode oscillations and the barotropic stability criterion have features in common with Saturn and Jupiter oscillations.

Ingersoll, A. P.↗

Parallel exponential time differencing methods for geophysical flow simulations

Two ocean models are considered for geophysical flow simulations: the multilayer shallow water equations and the multilayer primitive equations. For the former, we investigate the parallel performance of exponential time differencing (ETD) methods, including exponential Rosenbrock–Euler, ETD2wave, and B-ETD2wave. For the latter, we take advantage of the splitting of barotropic and baroclinic modes and propose a new two-level method in which an ETD method is applied to solve the fast barotropic mode. Furthermore, these methods could improve the computational efficiency of numerical simulations because ETD methods allow for much larger time step sizes than traditional explicit time-stepping techniques that are commonly used in existing computational ocean models. Several standard benchmark tests for ocean modeling are performed and comparison of the numerical results demonstrates a great potential of applying the parallel ETD methods for simulating real-world geophysical flows.

54 ENVIRONMENTAL SCIENCES↗

Eigenfrequencies and horizontal structure of divergent barotropic instability originating in tropical latitudes

A systematic investigation of eigenfunctions of the generalized Laplace tidal equation, for the case of tropical-latitude monotonic mean zonal wind profiles with a single narrow reversed vorticity gradient region, has revealed that, in the limit of low planetary zonal wavenumber, the barotropic instability modes bifurcate into weakly divergent modes of hemispheric scale, on the one hand, and on the other strongly divergent 'internal' modes trapped about the source region. These latter disturbances penetrate into the deep tropics as a Kelvin wave-type phenomenon not previously seen in this context. These results suggest that hemispheric barotropic instability need not be purely nondivergent, and that the growth of weakly divergent modes is preferred.

Dunkerton, Timothy J.↗

On Fofonoff's Mode

The classical barotropic ocean model of Veronis (1966) is reexamined to verify the possible existence of Fofonoff's (1954) steady free inertial mode by considering the balance where J is the Jacobian, eta is the streamfunction of the horizontal velocity, and R is a parameter of nonlinearity. A linear functional relationship between the potential vorticity and the streamfunction and inertial boundary layers along the ocean basin was suggested by Fofonoff. However, the numerical integration showed that the system is barotropically unstable. The typical instantaneous field is given. The statistical equilibrium state eta is also given. Although it resembles Fofonoff's solution, it is maintained by the Reynolds stress field induced by the eddies in addition to the wind stress and dissipation. The plot of eta versus R delta sq +y is given. It is shown that the Fofonoff's linear relation between the potential vorticity and the streamfunction does not hold uniformly over the entire basin. The above results show that the Fofonoff's solution can not be realized physically.

Merkine, L. O.↗

Formulating the r-mode Problem for Slowly Rotating Neutron Stars

We revisit the problem of inertial r-modes in stratified stars, drawing on a more precise description of the composition stratification in a mature neutron star. The results highlight issues with the traditional approach to the problem, leading us to rethink the computational strategy for the r-modes of nonbarotropic neutron stars. We outline two strategies for dealing with the problem. For moderate to slowly rotating neutron stars the only viable alternative may be to approach the problem numerically from the outset, while a meaningful slow-rotation calculation can be carried out for the fastest known spinning stars (which may be close to being driven unstable by the emission of gravitational waves). We demonstrate that the latter approach leads to a problem close, but not identical, to that for barotropic inertial modes. We also suggest that these reformulations of the problem likely resolve the long-standing problem of singular behavior associated with a corotation point in rotating relativistic neutron stars. This issue needs to be resolved in order to guide future gravitational-wave searches.

79 ASTRONOMY AND ASTROPHYSICS↗

Barotropic oscillations of the Mediterranean and Adriatic Seas

Calculations of the periods and structures of several of the lowest barotropic free modes of oscillation of the combined Mediterranean-Adriatic Basin are presented which take into account basin morphometry, bottom topography and the earth's rotation. The numerical calculations, based on a Galerkin procedure developed by Rao and Schwab (1976), were first carried out to find the normal modes of the combined Mediterranean-Adriatic system at a resolution of 1 deg on a Mercator projection, and used to determine the mouth of the Adriatic, which was then examined on a finer grid without rotation. Comparison of the periods of the lowest gravitational modes of the Mediterranean Sea under different conditions show the most significant effect to be due to variable basin topography. Periods of 38.5, 11.4, 8.4 and 7.4 h are computed for the lowest modes of the Mediterranean Sea, while periods of 21.9, 10.7 and 6.7 h are computed for the Adriatic, in agreement with observed periods.

Schwab, D. J.↗

Vacillations induced by interference of stationary and traveling planetary waves

The interference pattern produced when a traveling planetary wave propagates over a stationary forced wave is explored, examining the interference signature in a variety of diagnostics. The wave field is first restricted to a diatomic spectrum consisting of two components: a single stationary wave and a single monochromatic traveling wave. A simple barotropic normal mode propagating over a simple stationary plane wave is considered, and closed form solutions are obtained. The wave fields are then restricted spatially, providing more realistic structures without sacrificing the advantages of an analytical solution. Both stationary and traveling wave fields are calculated numerically with the linearized Primitive Equations in a realistic basic state. The mean flow reaction to the fluctuating eddy forcing which results from interference is derived. Synoptic geopotential behavior corresponding to the combined wave and mean flow fields is presented, and the synoptic signature in potential vorticity on isentropic surfaces is examined.

Salby, Murry L.↗

Barotropic instability of midlatitude zonal jets on Mars, earth and Venus

A linearized, nondivergent, barotropic vorticity model on a sphere is used to intercompare the fastest growing, barotropically unstable wave modes computed for zonal jets at high latitudes in the middle atmospheres of Venus, earth, and Mars. The model is briefly described, and the choice of a range of zonal jet parameters - primarily Rossby numbers and the jet width - appropriate to Venus and Mars is discussed. The results are presented and compared with those found by Elson (1982) and Hartmann (1983) for nondivergent, barotropically unstable modes in relatively broad, midlatitude zonal jets in planetary atmospheres. Some specific examples appropriate to Venus and Mars are presented.

Michelangeli, Diane V.↗

Energetics analysis of the observed and simulated general circulation using three-dimensional normal mode expansions

The energetics characteristics of the observed and simulated general circulation are analyzed using three-dimensional normal mode expansions. The data sets involved are the Goddard Laboratory for Atmospheres (GLA) analysis and simulation data and the Geophysical Fluid Dynamics Laboratory (GFDL) analysis data. The spectral energy properties of the Rossby and gravity modes and energy transformations are presented. Significant influences of model characteristics and the assimilation techniques are observed in the barotropic energy spectrum, particularly for the gravity mode. Energy transformations of the zonal mean field in the GLA analysis and simulation are similar, but distinctly different from that in the GFDL analysis. However, overall, the energy generation in the baroclinic mode is largely balanced by the sink in the barotropic mode. The present study may demonstrate utilities of the three-dimensional normal mode energetics in the analysis of the general circulation.

Tanaka, Hiroshi↗

Barotropic stability of realistic stratospheric jets

The stability of realistic jets is examined in a linearized barotropic model on a sphere. Approximately non-dispersive modes associated with a region of negative basic state absolute vorticity gradient on the poleward side of the jet are examined in detail. As in previous studies, broader jets and those which peak at higher latitudes produce poleward modes that are less dispersive. Jet profiles derived from observational data at 10, 5, and 2 mb for three Southern Hemisphere winter months are used in the model, and the results are compared with quasi-nondispersive features (QNDF) which have been observed in satellite data in the Southern Hemisphere winter stratosphere. Characteristics of the barotropically unstable modes compare remarkably well with those of the observed modes. The barotropic model results for a month in which these features are not observed indicate the presence of equatorward modes at wavenumbers 3 and 4 which grow considerably faster than the quasi-nondispersive poleward modes. The appearance of westward moving modes in the summer hemisphere during June and in analytical profiles with a realistic global structure is also noted.

Manney, Gloria L.↗