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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 19 records
All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

Data-driven causal model discovery and personalized prediction in Alzheimer's disease

Abstract With the explosive growth of biomarker data in Alzheimer’s disease (AD) clinical trials, numerous mathematical models have been developed to characterize disease-relevant biomarker trajectories over time. While some of these models are purely empiric, others are causal, built upon various hypotheses of AD pathophysiology, a complex and incompletely understood area of research. One of the most challenging problems in computational causal modeling is using a purely data-driven approach to derive the model’s parameters and the mathematical model itself, without any prior hypothesis bias. In this paper, we develop an innovative data-driven modeling approach to build and parameterize a causal model to characterize the trajectories of AD biomarkers. This approach integrates causal model learning, population parameterization, parameter sensitivity analysis, and personalized prediction. By applying this integrated approach to a large multicenter database of AD biomarkers, the Alzheimer’s Disease Neuroimaging Initiative, several causal models for different AD stages are revealed. In addition, personalized models for each subject are calibrated and provide accurate predictions of future cognitive status.

Zheng, Haoyang (ORCID:0000000168358242)↗
DOE OSTI2023

Towards physics-informed explainable machine learning and causal models for materials research

From emergent material descriptions to estimation of properties stemming from structures to optimization of process parameters for achieving best performance – all key facets of materials science and related fields have experienced tremendous growth with the introduction of data-driven models. This gradual progression goes at par with developments of machine learning workflows, from purely data-driven shallow models to those that are well-capable in encoding more complex graphs, symbolic representations, invariances, and positional embeddings. Furthermore, this perspective aims at summarizing strategic aspects of such transitions while providing insights into the requirements of bringing in explainable, interpretable predictive models, and causal learning to aid in materials design and discovery. Although the focus remains on a variety of functional materials by providing a handful of case studies, the applications of such integrated methodologies are universal to facilitate fundamental understandings of materials physics while enabling autonomous experiments.

36 MATERIALS SCIENCE↗
DOE OSTI2022

Graph-Based Similarity Metrics for Comparing Simulation Model Causal Structures

The causal structure of a simulation is a major determinant of both its character and behavior, yet most methods we use to compare simulations focus only on simulation outputs. We introduce a method that combines graphical representation with information theoretic metrics to quantitatively compare the causal structures of models. The method applies to agent-based simulations as well as system dynamics models and facilitates comparison within and between types. Comparing models based on their causal structures can illuminate differences in assumptions made by the models, allowing modelers to (1) better situate their models in the context of existing work, including highlighting novelty, (2) explicitly compare conceptual theory and assumptions to simulated theory and assumptions, and (3) investigate potential causal drivers of divergent behavior between models. We demonstrate the method by comparing two epidemiology models at different levels of aggregation.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2023

Regime-oriented causal model evaluation of Atlantic–Pacific teleconnections in CMIP6

The climate system and its spatio-temporal changes are strongly affected by modes of long-term internal variability, like the Pacific decadal variability (PDV) and the Atlantic multidecadal variability (AMV). As they alternate between warm and cold phases, the interplay between PDV and AMV varies over decadal to multidecadal timescales. Here, we use a causal discovery method to derive fingerprints in the Atlantic–Pacific interactions and to investigate their phase-dependent changes. Dependent on the phases of PDV and AMV, different regimes with characteristic causal fingerprints are identified in reanalyses in a first step. In a second step, a regime-oriented causal model evaluation is performed to evaluate the ability of models participating in the Coupled Model Intercomparison Project Phase 6 (CMIP6) in representing the observed changing interactions between PDV, AMV and their extra-tropical teleconnections. The causal graphs obtained from reanalyses detect a direct opposite-sign response from AMV to PDV when analyzing the complete 1900–2014 period and during several defined regimes within that period, for example, when AMV is going through its negative (cold) phase. Reanalyses also demonstrate a same-sign response from PDV to AMV during the cold phase of PDV. Historical CMIP6 simulations exhibit varying skill in simulating the observed causal patterns. Generally, large-ensemble (LE) simulations showed better network similarity when PDV and AMV were out of phase compared to other regimes. Also, the two largest ensembles (in terms of number of members) were found to contain realizations with similar causal fingerprints to observations. For most regimes, these same models showed higher network similarity when compared to each other. This work shows how causal discovery on LEs complements the available diagnostics and statistical metrics of climate variability to provide a powerful tool for climate model evaluation.

54 ENVIRONMENTAL SCIENCES↗
NASA NTRS1993

Causal modeling and event-driven simulation for monitoring of continuous systems

We describe extensions to the traditional techniques for anomaly detection, as well as new anomaly detection techniques based on alternate models of what distinguishes normal from abnormal behavior. Some of these techniques are designed to capture anomalies at individual sensors; some detect anomalies across collections of sensors. To assist in reasoning about complex global behaviors, we construct and simulate a causal model of the physical system being monitored. These techniques have been tested on data from the ECLSS of Space Station Freedom (SSF) and are being applied in advanced monitoring prototypes for the SSF External Active Thermal Control System of SSF and the Environmental Emergency and Consumables Management subsystem of the Space Shuttle.

Doyle, Richard↗
NASA NTRS1993

Causal Modeling and Event-driven Simulation for Monitoring of Continous Systems

Monitoring of complex continous physical systems has been traditionally accomplished in computer-based process control software by one or both of the following methods: 1) establishing limit checks for sensors and raising an alarm whenever a sensor's value crosses one of these thresholds, and 2) comparing predicted values from a simulation to actual sensor values and flagging discrepancies.

Causal↗
NASA NTRS2015

Risk-Based Causal Modeling of Airborne Loss of Separation

Maintaining safe separation between aircraft remains one of the key aviation challenges as the Next Generation Air Transportation System (NextGen) emerges. The goals of the NextGen are to increase capacity and reduce flight delays to meet the aviation demand growth through the 2025 time frame while maintaining safety and efficiency. The envisioned NextGen is expected to enable high air traffic density, diverse fleet operations in the airspace, and a decrease in separation distance. All of these factors contribute to the potential for Loss of Separation (LOS) between aircraft. LOS is a precursor to a potential mid-air collision (MAC). The NASA Airspace Operations and Safety Program (AOSP) is committed to developing aircraft separation assurance concepts and technologies to mitigate LOS instances, therefore, preventing MAC. This paper focuses on the analysis of causal and contributing factors of LOS accidents and incidents leading to MAC occurrences. Mid-air collisions among large commercial aircraft are rare in the past decade, therefore, the LOS instances in this study are for general aviation using visual flight rules in the years 2000-2010. The study includes the investigation of causal paths leading to LOS, and the development of the Airborne Loss of Separation Analysis Model (ALOSAM) using Bayesian Belief Networks (BBN) to capture the multi-dependent relations of causal factors. The ALOSAM is currently a qualitative model, although further development could lead to a quantitative model. ALOSAM could then be used to perform impact analysis of concepts and technologies in the AOSP portfolio on the reduction of LOS risk.

Geuther, Steven C.↗
NASA NTRS1995

Determining the Loci of Anomalies Using Minimal Causal Models

A new technique is described for attention focusing for use in anomaly detection in complex physical systems. The technique involves reasoning about the distance between two frequency distributions, and it is used to detect both anomalous system parameters and 'broken' causal dependencies. These two forms of information together isolate the locus of anomalous behavior in the system being monitored.

qualitative reasoning naive physics causal reasoni↗
NASA NTRS1987

A closed-loop causal model of workload based on a comparison of fuzzy and crisp measurements techniques

Fuzzy and crisp measurements of workload are compared for a tracking task that varied in bandwidth and order of control. Fuzzy measures are as powerful as crisp measures, and can under certain conditions give extra insights into workload causality. Both methods suggest that workload arises in a system in which effort, performance, difficulty, and task variables are linked in a closed loop. Marked individual differences were found. Future work on the fuzzy measurement of workload is justified.

Moray, Neville↗
NASA NTRS1993

Scheduling with partial orders and a causal model

In an ongoing project at Honeywell SRC, we are constructing a prototype scheduling system for a NASA domain using the 'Time Map Manager' (TMM). The TMM representations are flexible enough to permit the representation of precedence constraints, metric constraints between activities, and constraints relative to a variety of references (e.g., Mission Elapsed Time vs. Mission Day). The TMM also supports a simple form of causal reasoning (projection), dynamic database updates, and monitoring specified database properties as changes occur over time. The greatest apparent advantage to using the TMM is the flexibility added to the scheduling process: schedules are constructed by a process of 'iterative refinement,' in which scheduling decisions correspond to constraining an activity either with respect to another activity or with respect to one time line. The schedule becomes more detailed as activities and constraints are added. Undoing a scheduling decision means removing a constraint, not removing an activity from a specified place on the time line. For example, we can move an activity around on the time line by deleting constraints and adding new ones.

Boddy, Mark↗
NASA NTRS2018

Modeling Principles Using the Relation Between Lagrange Multipliers and Bond Graphs

Final document is attached. Modeling dynamic systems by bond graphs has become state of the art technology since hundreds of researchers around the world have incorporated the technology in many fields of engineering and science. The legacy of its invertor Prof. Henry Paynter at MIT in 1959 is now a fundamental and practical technique to understand reality by building computer models. This paper addresses a particular aspect of this technology when modeling of mechanical systems require relaxation of constraints by means of Lagrange principles. Lagrange's equations are a useful means of describing and solving systems with kinematic constraints. Lagrange multipliers are variables used in equations to find the extremes of multivariate functions. Here we explore the relation of Lagrange multipliers to solve modeling difficulties of a space vehicle with equations with dependent derivatives. Lagrange multipliers were used in conjunction with bond graphs to simulate a system where joints of kinematic linkages produce dependent derivatives. NASA's Morpheus Project lunar lander was used as a case study. The Morpheus Project is a terrestrial test vehicle designed to fly the terminal descent trajectory of a lunar lander to advance the Autonomous Landing Hazard Avoidance Technology (ALHAT). An objective of this study is to apply the modeling approach herein to capture the dynamic movement of the lander as the propellant is sloshed and consumed. This paper expands further the analysis presented by (Granda, J J. Nguyen, L, Carlson, T, Sahragard-Monfared, G., Fornalski, E., Brocker 2016). Using an automated approach bond graph models of state space equations were generated using the Computer Aided Modeling Program (CAMPG). Integral causality models and derivative causality models were considered in order to find the simpler solution for the mathematical dependencies produced in modeling this vehicle.

Granda, Jose J.↗
NASA NTRS1988

Integrating causal reasoning at different levels of abstraction

In this paper, a problem-solving system which uses a multilevel causal model of its domain is described. The system functions in the role of a pilot's assistant in the domain of commercial air transport emergencies. The model represents causal relationships among the aircraft subsystems, the effectors (engines, control surfaces), the forces that act on an aircraft in flight (thrust, lift), and the aircraft's flight profile (speed, altitude, etc.). The causal relationships are represented at three levels of abstraction: Boolean, qualitative, and quantitative, and reasoning about causes and effects can take place at each of these levels. Since processing at each level has different characteristics with respect to speed, the type of data required, and the specificity of the results, the problem-solving system can adapt to a wide variety of situations. The system is currently being implemented in the KEE(TM) development environment on a Symbolics Lisp machine.

Hudlicka, Eva↗
DOE OSTI2020

A Causal Inference Model Based on Random Forests to Identify the Effect of Soil Moisture on Precipitation

Soil moisture influences precipitation mainly through its impact on land–atmosphere interactions. Understanding and correctly modeling soil moisture–precipitation (SM–P) coupling is crucial for improving weather forecasting and subseasonal to seasonal climate predictions, especially when predicting the persistence and magnitude of drought. However, the sign and spatial structure of SM–P feedback are still being debated in the climate research community, mainly due to the difficulty in establishing causal relationships and the high degree of nonlinearity in land–atmosphere processes. To this end, we developed a causal inference model based on the Granger causality analysis and a nonlinear machine learning model. This model includes three steps: nonlinear anomaly decomposition, nonlinear Granger causality analysis, and evaluation of the quality of SM–P feedback, which eliminates the nonlinear response of interannual and seasonal variability and the memory effects of climatic factors and isolates the causal relationship of local SM–P feedback. We applied this model by using National Climate Assessment–Land Data Assimilation System (NCA-LDAS) datasets over the United States. Here, the results highlight the importance of nonlinear atmosphere responses in land–atmosphere interactions. In addition, the strong feedback over the southwestern United States and the Great Plains both highlight the impacts of topographic factors rather than only the sensitivity of evapotranspiration to soil moisture. Furthermore, the SM–P index defined by our framework is used to benchmark Earth system models (ESMs), which provides a new metric for efficiently identifying potential model biases in modeling local land–atmosphere interactions and may help the development of ESMs in improving simulations of water cycle variability and extremes.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2025

A GPU‐Accelerated Generative Adversarial Model for Causal Inference

We develop a GPU-accelerated machine learning generative adversarial model designed to facilitate causal inferences from observational data. Our model's theoretical framework is conceptualized in a manner that is amenable to being operable and scalable for high-performance computing platforms. We leverage GPU acceleration to develop a parallel evolutionary algorithm to achieve large-scale parallel computation of the model within a now widely accessible computing platform. This capability both enhances computational speedup and efficiency and also extends the use of the model to a broader range of substantive research domains while maintaining the underlying theoretical properties of the model.

GPU↗
DOE OSTI2021

Leveraging Structured Biological Knowledge for Counterfactual Inference: A Case Study of Viral Pathogenesis

Counterfactual inference is a useful tool for comparing outcomes of interventions on complex systems. It requires us to represent the system in form of a structural causal model, complete with a causal diagram, probabilistic assumptions on exogenous variables, and functional assignments. Specifying such models can be extremely difficult in practice. The process requires substantial domain expertise, and does not scale easily to large systems, multiple systems, or novel system modifications. At the same time, many application domains, such as molecular biology, are rich in structured causal knowledge that is qualitative in nature. This manuscript proposes a general approach for querying a causal knowledge graph with a causal question and converting the qualitative result into a quantitative structural causal model that can learn from data to answer the question. Here, we demonstrate the feasibility, accuracy and versatility of this approach using two case studies in systems biology. The first demonstrates the appropriateness of the underlying assumptions and the accuracy of the results. The second demonstrates the versatility of the approach by querying a knowledge base for the molecular determinants of a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)-induced cytokine storm and performing counterfactual inference to predict the causal effect of medical countermeasures for severely ill COVID-19 patients.

60 APPLIED LIFE SCIENCES↗