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At least 19 records

Characterization of the molecular mechanisms of silicon uptake in coccolithophores

Coccolithophores are an important group of calcifying marine phytoplankton. Although coccolithophores are not silicified, some species exhibit a requirement for Si in the calcification process. These species also possess a novel protein (SITL) that resembles the SIT family of Si transporters found in diatoms. However, the nature of Si transport in coccolithophores is not yet known, making it difficult to determine the wider role of Si in coccolithophore biology. Here, we show that coccolithophore SITLs act as Na + -coupled Si transporters when expressed in heterologous systems and exhibit similar characteristics to diatom SITs. We find that CbSITL from Coccolithus braarudii is transcriptionally regulated by Si availability and is expressed in environmental coccolithophore populations. However, the Si requirement of C. braarudii and other coccolithophores is very low, with transport rates of exogenous Si below the level of detection in sensitive assays of Si transport. As coccoliths contain only low levels of Si, we propose that Si acts to support the calcification process, rather than forming a structural component of the coccolith itself. Si is therefore acting as a micronutrient in coccolithophores and natural populations are only likely to experience Si limitation in circumstances where dissolved silicon (DSi) is depleted to extreme levels.

59 BASIC BIOLOGICAL SCIENCES↗

Detection of Coccolithophore Blooms in Ocean Color Satellite Imagery: a Generalized Approach for Use with Multiple Sensors

A generalized coccolithophore bloom classifier has been developed for use with ocean color imagery. The bloom classifier was developed using extracted satellite reflectance data from SeaWiFS images screened by the default bloom detection mask. In the current application, we extend the optical water type (OWT) classification scheme by adding a new coccolithophore bloom class formed from these extracted reflectances. Based on an in situ coccolithophore data set from the North Atlantic, the detection levels with the new scheme were between 1,500 and 1,800 coccolithophore cellsmL and 43,000 and 78,000 lithsmL. The detected bloom area using the OWT method was an average of 1.75 times greater than the default bloom detector based on a collection of SeaWiFS 1 km imagery. The versatility of the scheme is shown with SeaWiFS, MODIS Aqua, CZCS and MERIS imagery at the 1 km scale. The OWT scheme was applied to the daily global SeaWiFS imagery mission data set (years 19972010). Based on our results, average annual coccolithophore bloom area was more than two times greater in the southern hemisphere compared to the northern hemi- sphere with values of 2.00 106 km2 and 0.75 106 km2, respectively. The new algorithm detects larger bloom areas in the Southern Ocean compared to the default algorithm, and our revised global annual average of 2.75106 km2 is dominated by contributions from the Southern Ocean.

chlorophyll fluorescence↗

Achieving superior carbon transfer efficiency and pH control using membrane carbonation with a wide range of CO 2 contents for the coccolithophore Emiliania huxleyi

The economic viability of microalgal-derived products relies on rapid CO 2 transfer in a cost-effective manner. Many industrial gas streams contain concentrated CO 2 that, if converted to useful products, would lower greenhouse gas emissions and valorize the wasted CO 2 . Membrane carbonation (MC) uses non-porous hollow-fiber gas-transfer membranes to deliver CO 2 without bubble formation, which makes it possible to achieve a high carbon-transfer efficiency (CTE). However, inert gasses in the industrial streams (e.g., N 2 , O 2 , and H 2 O) can significantly lower the CO 2 -delivery rate. The means to overcome the buildup of inert gases in the membrane lumen is to manage the distal end of the membranes to sweep out inert gases while not wasting significant CO 2 . A MC-venting strategy was evaluated for CO 2 inputs from 5% to 100%. Abiotic tests using a restricted exit flow could achieve >95% CTE abiotic for industrial CO 2 streams. When integrated with semi-continuous cultivation of a marine coccolithophore, Emiliania huxleyi , CO 2 delivery and venting were on-demand based on a pH set points and pH-actuated feed and venting valves. MC using the venting strategy achieved 100% CTE biotic when delivering 100% and 50% CO 2 , which was better than 50% CTE biotic obtained from pH-controlled sparging of 100% CO 2 -sparging. E. huxleyi consistently fixed ~80% of the delivered CO 2 into biomass, and the remaining ~20% to calcite coccoliths. Finally, the compact size of MC modules, stable pH control, and no shear forces from bubble agitation during the CO 2 delivery made MC an ideal match for cultivation of coccolithophores, which are sensitive to shear forces and pH fluctuations.

54 ENVIRONMENTAL SCIENCES↗

Effect of viral infection on the ice nucleation efficiency of marine coccolithophores

A marine coccolithophore (Emiliania huxleyi) and coccolithovirus (EhV-207) were grown together in a marine aerosol reference tank (MART) to investigate how the viral lysis of phytoplankton affects the formation of immersion mode ice nucleating particles (INPs) in sea spray aerosol (SSA). The mean ice nucleation temperatures of SSA produced during viral infection were slightly lower (–28.5 °C) than pre-viral infection (–27.5 °C). Ice nucleation temperatures were relatively low, indicating that organic matter from E. huxleyi is less effective as an INP than phytoplankton examined in previous studies. E. huxleyi is covered in calcium carbonate coccoliths and contains high intracellular concentrations of dimethylsulfoniopropionate (DMSP). The ice nucleation efficiencies of purified components were measured to better understand this model system. Purified coccoliths were moderately effective INPs (–25.3 ± 0.4 °C at 5 x 10 2 mg L -1 (mean ±pooled SD)) that showed a concentration effect, with lower freezing temperatures at lower concentrations. Coccoliths and DMSP were both weakly efficient INPs. In comparison, purified phytoplankton viruses (EhV-207 and CtenRNAV-01) infecting coccolithophores and diatoms, respectively, did not affect freezing at temperatures warmer than the procedural blank. Our results suggest that E. huxleyi, in contrast to diatoms and cyanobacteria, is not a significant source of immersion mode INPs to the marine atmosphere, despite its broad distribution in the global ocean and large-scale bloom formation.

59 BASIC BIOLOGICAL SCIENCES↗

The Role of Phytoplankton Dynamics in the Seasonal and Interannual Variability of Carbon in the Subpolar North Atlantic - a Modeling Study

We developed an ecosystem/biogeochemical model system, which includes multiple phytoplankton functional groups and carbon cycle dynamics, and applied it to investigate physical-biological interactions in Icelandic waters. Satellite and in situ data were used to evaluate the model. Surface seasonal cycle amplitudes and biases of key parameters (DIC, TA, pCO2, air-sea CO2 flux, and nutrients) are significantly improved when compared to surface observations by prescribing deep water values and trends, based on available data. The seasonality of the coccolithophore and "other phytoplankton" (diatoms and dinoflagellates) blooms is in general agreement with satellite ocean color products. Nutrient supply, biomass and calcite concentrations are modulated by light and mixed layer depth seasonal cycles. Diatoms are the most abundant phytoplankton, with a large bloom in early spring and a secondary bloom in fall. The diatom bloom is followed by blooms of dinoflagellates and coccolithophores. The effect of biological changes on the seasonal variability of the surface ocean pCO2 is nearly twice the temperature effect, in agreement with previous studies. The inclusion of multiple phytoplankton functional groups in the model played a major role in the accurate representation of CO2 uptake by biology. For instance, at the peak of the bloom, the exclusion of coccolithophores causes an increase in alkalinity of up to 4 μmol kg(sup −1) with a corresponding increase in DIC of up to 16 μmol kg(sup −1). During the peak of the bloom in summer, the net effect of the absence of the coccolithophores bloom is an increase in pCO2 of more than 20 μatm and a reduction of atmospheric CO2 uptake of more than 6 mmolm(sup −2) d(sup −1). On average, the impact of coccolithophores is an increase of air-sea CO2 flux of about 27 %. Considering the areal extent of the bloom from satellite images within the Irminger and Icelandic Basins, this reduction translates into an annual mean of nearly 1500 tonnes C yr(sup −1).

Earth Resources↗

Interannual Variation in Phytoplankton Primary Production at a Global Scale

We used the NASA Ocean Biogeochemical Model (NOBM) combined with remote sensing data via assimilation to evaluate the contribution of four phytoplankton groups to the total primary production. First, we assessed the contribution of each phytoplankton groups to the total primary production at a global scale for the period 1998-2011. Globally, diatoms contributed the most to the total phytoplankton production ((is)approximately 50%, the equivalent of 20 PgC·y1). Coccolithophores and chlorophytes each contributed approximately 20% ((is) approximately 7 PgC·y1) of the total primary production and cyanobacteria represented about 10% ((is) approximately 4 PgC·y1) of the total primary production. Primary production by diatoms was highest in the high latitudes ((is) greater than 40 deg) and in major upwelling systems (Equatorial Pacific and Benguela system). We then assessed interannual variability of this group-specific primary production over the period 1998-2011. Globally the annual relative contribution of each phytoplankton groups to the total primary production varied by maximum 4% (1-2 PgC·y1). We assessed the effects of climate variability on group-specific primary production using global (i.e., Multivariate El Niño Index, MEI) and "regional" climate indices (e.g., Southern Annular Mode (SAM), Pacific Decadal Oscillation (PDO) and North Atlantic Oscillation (NAO)). Most interannual variability occurred in the Equatorial Pacific and was associated with climate variability as indicated by significant correlation (p (is) less than 0.05) between the MEI and the group-specific primary production from all groups except coccolithophores. In the Atlantic, climate variability as indicated by NAO was significantly correlated to the primary production of 2 out of the 4 groups in the North Central Atlantic (diatoms/cyanobacteria) and in the North Atlantic (chlorophytes and coccolithophores). We found that climate variability as indicated by SAM had only a limited effect on group-specific primary production in the Southern Ocean. These results provide a modeling and data assimilation perspective to phytoplankton partitioning of primary production and contribute to our understanding of the dynamics of the carbon cycle in the oceans at a global scale.

Coccolithophores↗

Interannual Variation in Phytoplankton Class-Specific Primary Production at a Global Scale

We used the NASA Ocean Biogeochemical Model (NOBM) combined with remote sensing data via assimilation to evaluate the contribution of 4 phytoplankton groups to the total primary production. First we assessed the contribution of each phytoplankton groups to the total primary production at a global scale for the period 1998-2011. Globally, diatoms were the group that contributed the most to the total phytoplankton production (50, the equivalent of 20 PgC y-1. Coccolithophores and chlorophytes each contributed to 20 (7 PgC y-1 of the total primary production and cyanobacteria represented about 10 (4 PgC y(sub-1) of the total primary production. Primary production by diatoms was highest in high latitude (45) and in major upwelling systems (Equatorial Pacific and Benguela system). We then assessed interannual variability of this group-specific primary production over the period 1998-2011. Globally the annual relative contribution of each phytoplankton groups to the total primary production varied by maximum 4 (1-2 PgC y-1. We assessed the effects of climate variability on the class-specific primary production using global (i.e. Multivariate El Nio Index, MEI) and regional climate indices (e.g. Southern Annular Mode (SAM), Pacific Decadal Oscillation (PDO) and North Atlantic Oscillation (NAO)). Most interannual variability occurred in the Equatorial Pacific and was associated with climate variability as indicated by significant correlation (p 0.05) between the MEI and the class-specific primary production from all groups except coccolithophores. In the Atlantic, climate variability as indicated by NAO was significantly correlated to the primary production of 2 out of the 4 groups in the North Central Atlantic (diatomscyanobacteria) and in the North Atlantic (chlorophytes and coccolithophores). We found that climate variability as indicated by SAM had only a limited effect on the class-specific primary production in the Southern Ocean. These results provide a modeling and data assimilation perspective to phytoplankton partitioning of primary production and contribute to our understanding of the dynamics of the carbon cycle in the oceans at a global scale.

Chl-a↗

Nanoscale elemental mapping reveals the effect of light and temperature on Gephyrocapsa huxleyi coccoliths

Coccolithophores produce vast quantities of stable calcium carbonate coccoliths, occupying the distinctive position as one of the most productive calcifying organisms on Earth. Gephyrocapsa huxleyi, the most abundant species of coccolithophores across modern oceans, plays an important role in the biological carbon pump and may serve as inspiration for nature-based carbon capture and sequestration technologies. Despite intensive study into G. huxleyi, the biological mechanisms of coccolith synthesis remain unclear. Here, we employ synchrotron X-ray fluorescence to quantitatively map elemental incorporation (calcium, Ca; strontium, Sr; sulfur, S; iron, Fe; and silicon, Si) into G. huxleyi coccoliths at 40-nanometer resolution. Trace elements play a role in determining the thermodynamic stability of coccolith carbonate sequestration and may provide insight into unknown mechanisms of coccolithogenesis. Although the coccolith Sr/Ca ratio has been widely applied as a paleoceanographic proxy, understanding of the Sr/Ca phenomena is limited. Our results confirm that Sr/Ca is temperature dependent but challenge the hypothesis that growth rate is a primary determinant. We find that increased light irradiance led to an ~30% decrease in calcium incorporated into the coccoliths. Surprisingly, X-ray fluorescence spectra and mapping revealed evidence of sulfur, at approximately three times the concentration of Sr, embedded in and around the calcite matrix, suggesting that G. huxleyi coccoliths may play an expanded role in the global sulfur cycle. Here, based on our elemental maps, we postulate that sulfur is active in the intracellular coccolith vesicle and plays a direct role in formation of G. huxleyi coccoliths.

36 MATERIALS SCIENCE↗

Ocean Observations with EOS/MODIS: Algorithm Development and Post Launch Studies

The following accomplishments were made during the present reporting period: (1) We expanded our new method, for identifying the presence of absorbing aerosols and simultaneously performing atmospheric correction, to the point where it could be added as a subroutine to the MODIS water-leaving radiance algorithm; (2) We successfully acquired micro pulse lidar (MPL) data at sea during a cruise in February; (3) We developed a water-leaving radiance algorithm module for an approximate correction of the MODIS instrument polarization sensitivity; and (4) We participated in one cruise to the Gulf of Maine, a well known region for mesoscale coccolithophore blooms. We measured coccolithophore abundance, production and optical properties.

Gordon, Howard R.↗

Climate Variability and Phytoplankton in the Pacific Ocean

The effect of climate variability on phytoplankton communities was assessed for the tropical and sub-tropical Pacific Ocean between 1998 and 2005 using an established biogeochemical assimilation model. The phytoplankton communities exhibited wide range of responses to climate variability, from radical shifts in the Equatorial Pacific, to changes of only a couple of phytoplankton groups in the North Central Pacific, to no significant changes in the South Pacific. In the Equatorial Pacific, climate variability dominated the variability of phytoplankton. Here, nitrate, chlorophyll and all but one of the 4 phytoplankton types (diatoms, cyanobacteria and coccolithophores) were strongly correlated (p<0.01) with the Multivariate El Nino Southern Oscillation Index (MEI). In the North Central Pacific, MEI and chlorophyll were significantly (p<0.01) correlated along with two of the phytoplankton groups (chlorophytes and coccolithophores). Ocean biology in the South Pacific was not significantly correlated with MEI. During La Nina events, diatoms increased and expanded westward along the cold tongue (correlation with MEI, r=-0.81), while cyanobacteria concentrations decreased significantly (r=0.78). El Nino produced the reverse pattern, with cyanobacteria populations increasing while diatoms plummeted. The diverse response of phytoplankton in the different major basins of the Pacific suggests the different roles climate variability can play in ocean biology.

Rousseaux, Cecile↗

The Effect of ENSO on Phytoplankton Composition in the Pacific Ocean

The effect of climate variability on phytoplankton communities was assessed for the tropical and sub-tropical Pacific Ocean between 1998 and 2005 using an established biogeochemical assimilation model. The phytoplankton communities exhibited wide range of responses to climate variability, from radical shifts in the Equatorial Pacific, to changes of only a couple of phytoplankton groups in the North Central Pacific, to no significant changes in the South Pacific. In the Equatorial Pacific, climate variability dominated the variability of phytoplankton. Here, nitrate, chlorophyll and all but one of the 4 phytoplankton types (diatoms, cyanobacteria and coccolithophores) were strongly correlated (p less than 0.01) with the Multivariate El Nino Southern Oscillation Index (MEI). In the North Central Pacific, MEI and chlorophyll were significantly (p<0.01) correlated along with two of the phytoplankton groups (chlorophytes and coccolithophores). Ocean biology in the South Pacific was not significantly correlated with MEI. During La Ni a events, diatoms increased and expanded westward along the cold tongue (correlation with MEI, r=-0.81), while cyanobacteria concentrations decreased significantly (r=0.78). El Nino produced the reverse pattern, with cyanobacteria populations increasing while diatoms plummeted. The diverse response of phytoplankton in the different major basins of the Pacific suggests the different roles climate variability can play in ocean biology.

Rousseaux, Cecile↗

The Effects of Climate Variability on Phytoplankton Composition in the Equatorial Pacific Ocean using a Model and a Satellite-Derived Approach

Compared the interannual variation in diatoms, cyanobacteria, coccolithophores and chlorophytes from the NASA Ocean Biogeochemical Model with those derived from satellite data (Hirata et al. 2011) between 1998 and 2006 in the Equatorial Pacific. Using NOBM, La Ni a events were characterized by an increase in diatoms (correlation with MEI, r=-0.81, P<0.05), while cyanobacteria concentrations decreased significantly (r=0.61; P<0.05). El Nino produced the reverse pattern, with cyanobacteria populations increasing while diatoms plummeted. This represented a radical shift in the phytoplankton community in response to climate variability. However, satellite-derived phytoplankton groups were all negatively correlated with climate variability (r ranged from -0.39 for diatoms to -0.64 for coccolithophores, P<0.05). Spatially, the satellite-derived approach was closer to an independent in situ dataset for all phytoplankton groups except diatoms than NOBM. However, the different responses of phytoplankton to intense interannual events in the Equatorial Pacific raises questions about the representation of phytoplankton dynamics in models and algorithms: is a phytoplankton community shift as in the model or an across-the-board change in abundances of all phytoplankton as in the satellite-derived approach.

Rousseaux, C. S.↗

Directional and Spectral Irradiance in Ocean Models: Effects on Simulated Global Phytoplankton, Nutrients, and Primary Production

The importance of including directional and spectral light in simulations of ocean radiative transfer was investigated using a coupled biogeochemical-circulation-radiative model of the global oceans. The effort focused on phytoplankton abundances, nutrient concentrations and vertically-integrated net primary production. The importance was approached by sequentially removing directional (i.e., direct vs. diffuse) and spectral irradiance and comparing results of the above variables to a fully directionally and spectrally-resolved model. In each case the total irradiance was kept constant; it was only the pathways and spectral nature that were changed. Assuming all irradiance was diffuse had negligible effect on global ocean primary production. Global nitrate and total chlorophyll concentrations declined by about 20% each. The largest changes occurred in the tropics and sub-tropics rather than the high latitudes, where most of the irradiance is already diffuse. Disregarding spectral irradiance had effects that depended upon the choice of attenuation wavelength. The wavelength closest to the spectrally-resolved model, 500 nm, produced lower nitrate (19%) and chlorophyll (8%) and higher primary production (2%) than the spectral model. Phytoplankton relative abundances were very sensitive to the choice of non-spectral wavelength transmittance. The combined effects of neglecting both directional and spectral irradiance exacerbated the differences, despite using attenuation at 500 nm. Global nitrate decreased 33% and chlorophyll decreased 24%. Changes in phytoplankton community structure were considerable, representing a change from chlorophytes to cyanobacteria and coccolithophores. This suggested a shift in community function, from light-limitation to nutrient limitation: lower demands for nutrients from cyanobacteria and coccolithophores favored them over the more nutrient-demanding chlorophytes. Although diatoms have the highest nutrient demands in the model, their relative abundances were generally unaffected because they only prosper in nutrient-rich regions, such as the high latitudes and upwelling regions, which showed the fewest effects from the changes in radiative simulations. The results showed that including directional and spectral irradiance when simulating the ocean light field can be important for ocean biology, but the magnitude varies with variables and regions. The quantitative results are intended to assist ocean modelers when considering improved irradiance representations relative to other processes or variables associated with the issues of interest.

Phytoplankton↗