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At least 19 records

2D Dam-Break Analysis of L Lake and PAR Pond Dams Using HEC-RAS

In 1991 a dam-break study was conducted for the high hazard dams located at L Lake and PAR Pond on the Savannah River Site. Two scenarios were considered, over topping from a Probable Maximum Flood (PMF), and a fair weather dam-break for either or both dams. Unfortunately, no inundation map was developed from the study. The purpose of this project was to redo the original dam-break study with improved data and methodology to generate Inundation maps to assist with emergency response and evacuation plans. The Hydrologic Engineering Center's River Analysis System (HEC-RAS) is a free to download river analysis modeling program developed by the US Army Corps of Engineers capable of 1D and 2D hydraulic calculations. Version 5.0.7 (released March 2019) was used for this project. Digital elevation models for the area were retrieved from the US Geological Survey database and converted to a .hdf file within the program. Then the 2D flood area was identified from the contours. Both L Lake and PAR Pond were inputted as 1D storage areas because DEM data does not contain elevation values under water bodies. An elevation vs volume curve was available for both storage areas. Initial elevations were set for both scenarios. Both dams are earthen dams. The Steel Creek dam at L Lake has 6 ft diameter conduit with an upper and lower sluice gate. PAR pond dam consist of a weir and sluice gate connected to an 8 x 8 ft channel. Both outlets were modeled with a pool elevation vs discharge curve. The steel creek dam sluice gates were assumed to be fully open in all cases. As in the previous study, the dams were set to breach when they were overtopped by 1.5 ft during PMF conditions (Figure 1). A fair weather breach was set to be due to a piping failure (Figure 1). In the dual dam break during fair weather conditions the PAR pond dam fails 3 hours after Steel Creek to achieve maximum flooding in the down stream reaches. Simulation was run 3 days for each case and with a 1 minute computational interval. Maximum flooding occurs under PMF conditions with the failure of both dams. PAR pond dam fails first 16 hours and 32 minutes after the start of the simulation with the Steel creek dam failing 6 minutes later. In all cases, the bridges and roads spanning Steel Creek and Lower Three Runs will be inundated and potentially washed away. The Burtons Ferry Highway south of the storage areas will be partially flooded during PMF failure, dual fair weather failure, and PAR pond failure under fair weather conditions.

54 ENVIRONMENTAL SCIENCES↗

Comparison of depth-averaged concentration and bed load flux sediment transport models of dam-break flow

This paper presents numerical simulations of dam-break flow over a movable bed. Two different mathematical models were compared: a fully coupled formulation of shallow water equations with erosion and deposition terms (a depth-averaged concentration flux model), and shallow water equations with a fully coupled Exner equation (a bed load flux model). Both models were discretized using the cell-centered finite volume method, and a second-order Godunov-type scheme was used to solve the equations. The numerical flux was calculated using a Harten, Lax, and van Leer approximate Riemann solver with the contact wave restored (HLLC). A novel slope source term treatment that considers the density change was introduced to the depth-averaged concentration flux model to obtain higher-order accuracy. A source term that accounts for the sediment flux was added to the bed load flux model to reflect the influence of sediment movement on the momentum of the water. In a one-dimensional test case, a sensitivity study on different model parameters was carried out. For the depth-averaged concentration flux model, Manning's coefficient and sediment porosity values showed an almost linear relationship with the bottom change, and for the bed load flux model, the sediment porosity was identified as the most sensitive parameter. The capabilities and limitations of both model concepts are demonstrated in a benchmark experimental test case dealing with dam-break flow over variable bed topography.

58 GEOSCIENCES↗

Dam-Break Flow Measurements of Liquid–Granular Mixtures in a Channelized Reservoir

Dam-break flows of granular materials exhibit a complex non-Newtonian rheology, which is strongly influenced by various factors, such as the characteristics of the granular material, the degree of initial compaction, and saturation level of the granular matrix. Specially adapted nonintrusive techniques are required to investigate these flows in the laboratory. This paper investigated the nonintrusive technique of image analysis. The methodologies used in the measurement of bulk flow parameters, such as flow depth, front velocity, and flow rate, and the extraction of detailed flow characteristics such as velocity profiles, were discussed in the context of a series of granular dam-break flow experiments. These experiments were performed under three types of initial conditions: dry, saturated (water filling the pore space), and submerged (a layer of saturated granular material submerged under water) using four types of granular materials—PET pellets, crushed walnut shells, urea, and sand—with grain sizes ranging from 200 μm to 2.9 mm. High-speed cameras were used to capture the evolution and local properties of the flow, such as velocity fields using particle image velocimetry (PIV). Bulk properties of the flow were obtained by tracking the surface profile of the granular matrix and the water table. The extracted profiles were used to measure the evolution of the volume of the granular matrix and the fluid phase separately upstream and downstream of the gate, which allowed measuring the dilatancy (increase in pore space). The study showed that the image analysis techniques are versatile and can be adapted to measure different flow parameters in a variety of granular flows to better understand and analyze their complex behavior. Finally, the advantages and drawbacks of each image analysis technique were discussed and best-practice recommendations were provided.

42 ENGINEERING↗

The advancing wave front on a sloping channel covered by a rod canopy following an instantaneous dam break

The drag coefficient Cd for a rigid and uniformly distributed rod canopy covering a sloping channel following the instantaneous collapse of a dam was examined using flume experiments. The measurements included space x and time t high resolution images of the water surface h(x, t) for multiple channel bed slopes So and water depths behind the dam Ho along with drag estimates provided by sequential load cells. Using these data, an analysis of the Saint-Venant equation (SVE) for the front speed was conducted using the diffusive wave approximation. An inferred Cd=0.4 from the h(x, t) data near the advancing front region, also confirmed by load cell measurements, is much reduced relative to its independently measured steady-uniform flow case. This finding suggests that drag reduction mechanisms associated with transients and flow disturbances are more likely to play a dominant role when compared to conventional sheltering or blocking effects on Cd examined in uniform flow. The increased air volume entrained into the advancing wave front region as determined from an inflow–outflow volume balance partly explains the Cd reduction from unity.

Mechanics↗

Urban flood modeling using shallow water equations with depth-dependent anisotropic porosity

The shallow water model with anisotropic porosity conceptually takes into account the unresolved subgrid-scale features, e.g. microtopography or buildings. This enables computationally efficient simulations that can be run on coarser grids, whereas reasonable accuracy is maintained via the introduction of porosity. This article presents a novel numerical model for the depth-averaged equations with anisotropic porosity. The porosity is calculated using the probability mass function of the subgrid-scale features in each cell and updated in each time step. The model is tested in a one-dimensional theoretical benchmark before being evaluated against measurements and high-resolution predictions in three case studies: a dam-break over a triangular bottom sill, a dam-break through an idealized city and a rainfall-runoff event in an idealized urban catchment. The physical processes could be approximated relatively well with the anisotropic porosity shallow water model. The computational resolution influences the porosities calculated at the cell edges and therefore has a large influence on the quality of the solution. The computational time decreased significantly, on average three orders of magnitude, in comparison to the classical high-resolution shallow water model simulation.

finite volume method↗

The Influence of the Instantaneous Collapse of Tailings Pond on Downstream Facilities

To evaluate the evolutionary processes guiding the formation of the tailings‐water mixtures produced by the instantaneous collapse of tailings ponds and the influence of these on downstream facilities, a 2D simulation model with reasonable boundary and working conditions derived from actual engineering practice was built in this study, and the relationship between dam‐break elevation and impact on downstream facilities was also analyzed to determine the relevant mechanism of influence. Computational results indicated that lowering the dam‐break elevation caused the maximum velocity and flooding depth, along with the flooded area at monitoring points, to gradually increase. The occurrence times of maximum velocity and flooding depth were also gradually moved forward as the breaking elevation was reduced; this effect is directly related to the increase in the total potential energy at the lower break elevations. Further simulations of sand‐prevent dams with different heights located downstream from a tailings pond were carried out to identify methods for mitigating the impact of dam failure. The results revealed that increasing the height of the sand‐prevent dam reduced the production of tailings mixtures. Based on the results, the construction of a sand‐prevent dam with a crest elevation equal to that of the starter dam was recommended.

Wang, Sha (ORCID:0000000324875445)↗

Development of a River Dynamical Core for E3SM to simulate compound flooding on Exascale-class heterogeneous supercomputers

Flooding events pose significant risk to human life, property, and infrastructure. Physically-consistent quantification of altered flood risks in global models requires hyper-resolution (~1 km) or fine flood simulations using two-dimensional (2D) physics schemes, both of which are unavailable in the current generation Earth System Models. Here, in this work, we have developed the River Dynamical Core (RDycore), which is an open-source, 2D shallow water equation (SWE) library for the U.S. Department of Energy's Energy Exascale Earth System Model (E3SM). RDycore uses PETSc and libCEED libraries that allows it to run efficiently on CPUs and GPUs, as well as select a time-integration algorithm at runtime without requiring any code modifications. RDycore achieves spatial error convergence rates for problems with analytical and manufactured solutions similar to those reported previously in the literature, or consistent with the implemented first-order spatial discretization scheme. RDycore's accuracy in predicting flooding for a well-studied dam break problem is comparable to existing SWE models. For a problem with 471 million grid cells, RDycore achieves a speedup of 6.6x and 7.6x on GPUs compared to CPUs when using 320 compute nodes on DOE's Perlmutter and Frontier supercomputers, respectively. The one-way coupling of the RDycore library within E3SM is demonstrated by performing multiple 5-day flooding simulations during Hurricane Harvey driven by five precipitation datasets. The E3SM--RDycore simulations at 30 m spatial resolution accurately simulate maximum water height during the hurricane when benchmarked against a previously published study and achieve a speedup of 15x (Perlmutter) and 21x (Frontier) on GPUs relative to CPUs. The work presented here is the foundational step in providing hardware and algorithmic portability framework for simulating kilometer-scale river dynamics within E3SM.

Flood Simulation↗

A study of solid wall models for weakly compressible SPH

This paper is concerned with a comparison of two methods of treating solid wall boundaries in the weakly compressible (SPH) method. They have been chosen because of their wide use in simulations. These methods are the boundary force particles of Monaghan and Kajtar [24] and the use of layers of fixed boundary particles. The latter was first introduced by Morris et al. [26] but has since been improved by Adami et al. [1] whose algorithm involves interpolating the pressure and velocity from the actual fluid to the boundary particles. For each method, we study the effect of the density diffusive terms proposed by Molteni and Colagrossi [19] and modified by Antuono et al. [3]. We test the methods by a series of simulations commencing with the time-dependent spin-down of fluid within a cylinder and the behaviour of fluid in a box subjected to constant acceleration at an angle to the walls of the box, and concluding with a dam break over a triangular obstacle. In the first two cases the results from the two methods can be compared to analytical solutions while, in the latter case, they can be compared with experiments and other methods. These results show that the method of Adami et al. together with density diffusion is in very satisfactory agreement with the experimental results and is, overall, the best of the methods discussed here.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

SPH with dynamical smoothing length adjustment based on the local flow kinematics

Due to the Lagrangian nature of Smoothed Particle Hydrodynamics (SPH), the adaptive resolution remains a challenging task. In this work, we first analyse the influence of the simulation parameters and the smoothing length on solution accuracy, in particular in high strain regions. Based on this analysis we develop a novel approach to dynamically adjust the kernel range for each SPH particle separately, accounting for the local flow kinematics. We use the Okubo–Weiss parameter that distinguishes the strain and vorticity dominated regions in the flow domain. The proposed development is relatively simple and implies only a moderate computational overhead. We validate the modified SPH algorithm for a selection of two-dimensional test cases: the Taylor–Green flow, the vortex spin-down, the lid-driven cavity and the dam-break flow against a sharp-edged obstacle. The simulation results show good agreement with the reference data and improvement of the long-term accuracy for unsteady flows. For the lid-driven cavity case, the proposed dynamical adjustment remedies the problem of tensile instability (particle clustering).

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Optimization of Structural Flood Mitigation Strategies

The dynamics of flooding are primarily influenced by the shape, height, and roughness (friction) of the underlying topography. For this reason, mechanisms to mitigate floods frequently employ structural measures that either modify topographic elevation, for example, through the placement of levees and sandbags, or increase roughness, for example, through revegetation projects. However, the configuration of these measures is typically decided in an ad hoc manner, limiting their overall effectiveness. The advent of high–performance surface–water modeling software and improvements in black–box optimization suggest that a more principled design methodology may be possible. This paper proposes a new computational approach to the problem of designing structural mitigation strategies under physical and budgetary constraints. It presents the development of a problem discretization amenable to simulation–based, derivative–free optimization. However, meta–heuristics alone are found to be insufficient for obtaining quality solutions in a reasonable amount of time. As a result, this paper proposes novel numerical and physics–based procedures to improve convergence to a high–quality mitigation. Furthermore the efficiency of the approach is demonstrated on hypothetical dam break scenarios of varying complexity under various mitigation budget constraints. In particular, experimental results show that, on average, the final proposed algorithm results in a 65% improvement in solution quality compared to a direct implementation.

54 ENVIRONMENTAL SCIENCES↗

FreeMHD: Validation and verification of the open-source, multi-domain, multi-phase solver for electrically conductive flows

The extreme heat fluxes in the divertor region of tokamaks may require an alternative to solid plasma-facing components, for the extraction of heat and the protection of the surrounding walls. Flowing liquid metals are proposed as an alternative, but raise additional challenges that require investigation and numerical simulations. Free surface designs are desirable for plasma-facing components, but steady flow profiles and surface stability must be ensured to limit undesirable interactions with the plasma. Previous studies have mainly used steady-state, 2D, or simplified models for internal flows and have not been able to adequately model free-surface liquid metal (LM) experiments. Therefore, FreeMHD has been recently developed as an open-source magnetohydrodynamics (MHD) solver for free-surface electrically conductive flows subject to a strong external magnetic field. The FreeMHD solver computes incompressible free-surface flows with multi-region coupling for the investigation of MHD phenomena involving fluid and solid domains. The model utilizes the finite-volume OpenFOAM framework under the low magnetic Reynolds number approximation. FreeMHD is validated using analytical solutions for the velocity profiles of closed channel flows with various Hartmann numbers and wall conductance ratios. Next, experimental measurements are then used to verify FreeMHD, through a series of cases involving dam breaking, 3D magnetic fields, and free-surface LM flows. These results demonstrate that FreeMHD is a reliable tool for the design of LM systems under free surface conditions at the reactor scale. Furthermore, it is flexible, computationally inexpensive, and can be used to solve fully 3D transient MHD flows.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Topography-based Flood Planning and Optimization Capability Development Report

Globally, water-related disasters are among the most frequent and costly natural hazards. Flooding inflicts catastrophic damage on critical infrastructure and population, resulting in substantial economic and social costs. NISAC is developing LeveeSim, a suite of nonlinear and network optimization models, to predict optimal barrier placement to protect critical regions and infrastructure during flood events. LeveeSim currently includes a high-performance flood model to simulate overland flow, as well as a network optimization model to predict optimal barrier placement during a flood event. The LeveeSim suite models the effects of flooding in predefined regions. By manipulating a domain’s underlying topography, developers altered flood propagation to reduce detrimental effects in areas of interest. This numerical altering of a domain’s topography is analogous to building levees, placing sandbags, etc. To induce optimal changes in topography, NISAC used a novel application of an optimization algorithm to minimize flooding effects in regions of interest. To develop LeveeSim, NISAC constructed and coupled hydrodynamic and optimization algorithms. NISAC first implemented its existing flood modeling software to use massively parallel graphics processing units (GPUs), which allowed for the simulation of larger domains and longer timescales. NISAC then implemented a network optimization model to predict optimal barrier placement based on output from flood simulations. As proof of concept, NISAC developed five simple test scenarios, and optimized topographic solutions were compared with intuitive solutions. Finally, as an early validation example, barrier placement was optimized to protect an arbitrary region in a simulation of the historic Taum Sauk dam breach.

42 ENGINEERING↗

Imaging the breaking of electrostatic dams in graphene for ballistic and viscous fluids

The charge carriers in a material can, under special circumstances, behave as a viscous fluid. Here, in this work, we investigated such behavior by using scanning tunneling potentiometry to probe the nanometer-scale flow of electron fluids in graphene as they pass through channels defined by smooth and tunable in-plane p-n junction barriers. We observed that as the sample temperature and channel widths are increased, the electron fluid flow undergoes a Knudsen-to-Gurzhi transition from the ballistic to the viscous regime characterized by a channel conductance that exceeds the ballistic limit, as well as suppressed charge accumulation against the barriers. Our results are well modeled by finite element simulations of two-dimensional viscous current flow, and they illustrate how Fermi liquid flow evolves with carrier density, channel width, and temperature.

Science & Technology - Other Topics↗

Identification of recG genetic interactions in Escherichia coli by transposon sequencing

ABSTRACT Maintaining the integrity of the genome is of utmost importance for cell division and propagation. In Escherichia coli , the RecG protein has been implicated in processing branched recombination intermediates during DNA repair processes, but the primary cellular role(s) of RecG and the repair pathways in which it acts have been difficult to define. To gain additional insight into RecG function, we employed transposon sequencing to identify recG genetic interactions and reveal complementary or redundant functions. The strongest hits from the screen were the dam , uvrD , rnhA , radA , and rep genes. The conditional importance of these five genes in cells lacking recG was confirmed using a plasmid-based assay, revealing synthetic lethal interactions for most double deletion strains. Several of the synthetic lethal gene combinations (with uvrD, rep, and radA , but not rnhA or dam ) were suppressed by deletion of recF or recO , indicating that their genetic relationships involved roles in post-replication gap repair. Additionally, loss of the RecG/SSB interaction phenocopied a recG deletion when combined with dam , uvrD , radA , or rnhA deletions but not with rep . The results reinforce the idea of RecG as a general genome guardian. RecG has at least two functions. It plays an important role in the resolution of joint molecules behind the fork, formed during post-replication gap repair. RecG is also required to suppress genome over-replication caused by unscheduled replication initiation at R-loops, at double-strand breaks caused by dam inactivation, and during replication termination. IMPORTANCE DNA damage and subsequent DNA repair processes are mutagenic in nature and an important driver of evolution in prokaryotes, including antibiotic resistance development. Genetic screening approaches, such as transposon sequencing (Tn-seq), have provided important new insights into gene function and genetic relationships. Here, we employed Tn-seq to gain insight into the function of the recG gene, which renders Escherichia coli cells moderately sensitive to a variety of DNA-damaging agents when they are absent. The reported recG genetic interactions can be used in combination with future screens to aid in a more complete reconstruction of DNA repair pathways in bacteria.

59 BASIC BIOLOGICAL SCIENCES↗

An entropy stable nodal discontinuous Galerkin method for the two dimensional shallow water equations on unstructured curvilinear meshes with discontinuous bathymetry

We design an arbitrary high-order accurate nodal discontinuous Galerkin spectral element approximation for the non-linear two dimensional shallow water equations with non-constant, possibly discontinuous, bathymetry on unstructured, possibly curved, quadrilateral meshes. The scheme is derived from an equivalent flux differencing formulation of the split form of the equations. We prove that this discretization exactly preserves the local mass and momentum. Furthermore, combined with a special numerical interface flux function, the method exactly preserves the mathematical entropy, which is the total energy for the shallow water equations. By adding a specific form of interface dissipation to the baseline entropy conserving scheme we create a provably entropy stable scheme. That is, the numerical scheme discretely satisfies the second law of thermodynamics. Finally, with a particular discretization of the bathymetry source term we prove that the numerical approximation is well-balanced. We provide numerical examples that verify the theoretical findings and furthermore provide an application of the scheme for a partial break of a curved dam test problem.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Identification of genetic interactions with priB links the PriA/PriB DNA replication restart pathway to double-strand DNA break repair in Escherichia coli

Collisions between DNA replication complexes (replisomes) and impediments such as damaged DNA or proteins tightly bound to the chromosome lead to premature dissociation of replisomes at least once per cell cycle in Escherichia coli. Left unrepaired, these events produce incompletely replicated chromosomes that cannot be properly partitioned into daughter cells. DNA replication restart, the process that reloads replisomes at prematurely terminated sites, is therefore essential in E. coli and other bacteria. Three replication restart pathways have been identified in E. coli: PriA/PriB, PriA/PriC, and PriC/Rep. A limited number of genetic interactions between replication restart and other genome maintenance pathways have been defined, but a systematic study placing replication restart reactions in a broader cellular context has not been performed. We have utilized transposon-insertion sequencing to identify new genetic interactions between DNA replication restart pathways and other cellular systems. Known genetic interactors with the priB replication restart gene (uniquely involved in the PriA/PriB pathway) were confirmed and several novel priB interactions were discovered. Targeted genetic and imaging-based experiments with priB and its genetic partners revealed significant double-strand DNA break accumulation in strains with mutations in dam, rep, rdgC, lexA, or polA. Modulating the activity of the RecA recombinase partially suppressed the detrimental effects of rdgC or lexA mutations in ΔpriB cells. Taken together, our results highlight roles for several genes in double-strand DNA break homeostasis and define a genetic network that facilitates DNA repair/processing upstream of PriA/PriB-mediated DNA replication restart in E. coli.

59 BASIC BIOLOGICAL SCIENCES↗

An Assessment of Non-Powered Dam Hydropower Development Opportunities in the United States

Retrofitting non-powered dams (NPDs) to add hydropower offers multiple benefits over traditional, new hydropower development. Since much of the civil works infrastructure already exists, many retrofits require minimal new construction and can leverage existing water conveyances and discharge for generation. Although NPDs vary considerably in terms of their defining characteristics, identifying similarities helps support targeted investment and find opportunities to develop solutions for common challenges. With the publication of NPD-related data in 2022 (Hansen et al. 2022b), the US Department of Energy and relevant stakeholders are equipped with key information across roughly 89,000 US NPDs. These data represent the best-available information to date and extend beyond previous assessments of potential power capacity by describing design, operational, socioeconomic, environmental aspects of NPDs (Hadjerioua et al. 2012). To capitalize on these efforts to improve breadth and depth of NPD data access, this study uses a data-driven approach to assess NPD hydropower development opportunities in the United States. To help describe project feasibility drivers for NPDs, recent NPD retrofits were reviewed to examine variability with respect to a variety of characteristics. Based on the assessment of recent retrofits and data availability, several attributes were selected to characterize the remaining NPD population: (1) owner type, (2) 30% exceedance flow (a common design flow that describes the flow that is exceeded by 30% of the flow in the record), (3) hydraulic head, and (4) maximum reservoir storage. These four characteristics were used as inputs to a statistical clustering analysis (a common technique for grouping individuals of a population based on similarities or how closely associated individuals are to one another) of a set of 2,709 NPDs with at least 100 kW potential capacity and recently retrofit dams with available data. With the large dataset of NPDs, the clusters help describe how the population breaks down into different types (i.e., how many types of dams there are and what portion of the population belongs to each cluster).

13 HYDRO ENERGY↗