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NASA NTRS2018

Toward a Common Earth Data Publication Framework

Data publication is an essential activity for all data archives. Each of NASA's twelve Distributed Active Archive Centers (DAACs) have established publication workflows which account for the heterogeneous suite of missions, instruments, data providers, and datasets managed within the Earth Observation System Data and Information System (EOSDIS) program. Some aspects of data publication vary across DAACs: workflows range from manual to automatic, terms used to describe publication elements differ, and systems used to publish and manage data vary. Despite these differences, the DAAC data publication processes are generally the same: obtain the data and related information from data providers, describe the data with metadata and documentation, and release the data for access by the user community. In order to improve consistency and reduce the time required to publish data, we have developed a cross-DAAC initiative called the Common Earthdata Publication Framework (Earthdata Pub). Earthdata Pub seeks to: standardize communications and interactions with data providers; identify and standardize common workflows and steps in the data publication process; and design/implement a front-end system with features that include a common web interface, email & status tracking, and common application programming interfaces (APIs) to communicate with various DAAC-specific software components (services and applications) on the back-end. We will present the latest updates on this effort's progress and future plans.

data publication↗
NASA NTRS2017

Collaborative Data Publication Utilizing the Open Data Repository's (ODR) Data Publisher

Introduction: For small communities in diverse fields such as astrobiology, publishing and sharing data can be a difficult challenge. While large, homogenous fields often have repositories and existing data standards, small groups of independent researchers have few options for publishing standards and data that can be utilized within their community. In conjunction with teams at NASA Ames and the University of Arizona, the Open Data Repository's (ODR) Data Publisher has been conducting ongoing pilots to assess the needs of diverse research groups and to develop software to allow them to publish and share their data collaboratively. Objectives: The ODR's Data Publisher aims to provide an easy-to-use and implement software tool that will allow researchers to create and publish database templates and related data. The end product will facilitate both human-readable interfaces (web-based with embedded images, files, and charts) and machine-readable interfaces utilizing semantic standards. Characteristics: The Data Publisher software runs on the standard LAMP (Linux, Apache, MySQL, PHP) stack to provide the widest server base available. The software is based on Symfony (www.symfony.com) which provides a robust framework for creating extensible, object-oriented software in PHP. The software interface consists of a template designer where individual or master database templates can be created. A master database template can be shared by many researchers to provide a common metadata standard that will set a compatibility standard for all derivative databases. Individual researchers can then extend their instance of the template with custom fields, file storage, or visualizations that may be unique to their studies. This allows groups to create compatible databases for data discovery and sharing purposes while still providing the flexibility needed to meet the needs of scientists in rapidly evolving areas of research. Research: As part of this effort, a number of ongoing pilot and test projects are currently in progress. The Astrobiology Habitable Environments Database Working Group is developing a shared database standard using the ODR's Data Publisher and has a number of example databases where astrobiology data are shared. Soon these databases will be integrated via the template-based standard. Work with this group helps determine what data researchers in these diverse fields need to share and archive. Additionally, this pilot helps determine what standards are viable for sharing these types of data from internally developed standards to existing open standards such as the Dublin Core (http://dublincore.org) and Darwin Core (http://rs.twdg.org) metadata standards. Further studies are ongoing with the University of Arizona Department of Geosciences where a number of mineralogy databases are being constructed within the ODR Data Publisher system. Conclusions: Through the ongoing pilots and discussions with individual researchers and small research teams, a definition of the tools desired by these groups is coming into focus. As the software development moves forward, the goal is to meet the publication and collaboration needs of these scientists in an unobtrusive and functional way.

easy to use and implement software tool↗
NASA NTRS2017

Collaborative Data Publication Utilizing the Open Data Repository's Data Publisher

For small communities in multidisciplinary fields such as astrobiology, publishing and sharing data can be challenging. While large, homogenous fields often have repositories and existing data standards, small groups of independent researchers have few options for publishing data that can be utilized within their community. In conjunction with teams at NASA Ames and the University of Arizona, a number of pilot studies are being conducted to assess the needs of these research groups and to guide the software development so that it allows them to publish and share their data collaboratively.

Human-readable interfaces↗
NASA NTRS2019

EARTHDATA PUB: A Data Publication Workflow Solution for NASA’s EOSDIS

Each NASA Distributed Active Archive Center (DAAC) faces the challenge of dealing with an increasingly diverse number of publishable data products from diverse data producers. Data producers, on the other hand, may experience pain points when interacting with the EOSDIS for the first time or when publishing different data at different DAACs. As a result, there has been a growing need to develop a common software framework that serves as a common interface for data producers, rigorously defines the data publication procedure for DAAC staff, facilitates the management of various data publication processes, and tracks the progress of data publication. This software should also account for the different configurations at different DAACs. Currently, two primary data publication workflow and tracking tools exist in operation at the EOSDIS: Semi-Automated ingest System (SAuS) and Data Publication workflow Portal (DAPPeR). However, neither tool is cloud-ready. Automated data processing could be managed by Cumulus, an EOSDIS cloud-based data ingest, archive and management system. However, Cumulus does not support manual tasks or on-premise implementations. We propose to develop the Earthdata Publication Minimum Viable Product (Earthdata Pub MVP) -- a cloud-hosted solution that works with both cloud and on-premise systems and implements the communications and exchange requirements generated by the Earthdata Pub information architecture team.

Rice, Justin L.↗
NASA NTRS2019

GEONEX Data Products: Geostationary Satellite Derived Land Surface and Atmospheric Public Data Products

The latest generation of geostationary satellites carry sensors such as the Advanced Baseline Imager (GOES-16/17) and the Advanced Himawari Imager (Himawari-8/9) that closely mimic the spatial and spectral characteristics of MODIS and VIIRS, useful for monitoring land surface conditions. The NASA Earth Exchange (NEX) team at Ames Research Center has embarked on a collaborative effort among scientists from NASA and NOAA exploring the feasibility of producing operational land surface products similar to those from MODIS/VIIRS. The team built a processing pipeline called GEONEX that is capable of converting raw geostationary data into routine products of Fires, surface reflectances, vegetation indices, LAI/FPAR, ET and GPP/NPP using algorithms adapted from both NASA/EOS and NOAA/GOES-R programs. The GEONEX pipeline will begin to produce provisional data products to be consumed by external collaborators and the academic community. In order to better inform and introduce the GEONEX products to the science community, the provisional products shall be distributed from the NAS data portal, located at data.nas.nasa.gov, and simple webpage at www.nasa.gov/geonex has been deployed, which describes any algorithms used in deriving the products, user manuals and data file information. We will also update the status of the data processing, on the website and provide links to the latest datasets, and use a geonex mailing list, using lists.nasa.gov.

Wang, Weile↗
NASA NTRS2001

Integrated Propulsion Data System Public Web Site

The Integrated Propulsion Data System's (IPDS) focus is to provide technologically-advanced philosophies of doing business at SSC that will enhance the existing operations, engineering and management strategies and provide insight and metrics to assess their daily impacts, especially as related to the Propulsion Test Directorate testing scenarios for the 21st Century.

Hamilton, Kimberly↗
NASA NTRS2007

Simple, Script-Based Science Processing Archive

The Simple, Scalable, Script-based Science Processing (S4P) Archive (S4PA) is a disk-based archival system for remote sensing data. It is based on the data-driven framework of S4P and is used for data transfer, data preprocessing, metadata generation, data archive, and data distribution. New data are automatically detected by the system. S4P provides services such as data access control, data subscription, metadata publication, data replication, and data recovery. It comprises scripts that control the data flow. The system detects the availability of data on an FTP (file transfer protocol) server, initiates data transfer, preprocesses data if necessary, and archives it on readily available disk drives with FTP and HTTP (Hypertext Transfer Protocol) access, allowing instantaneous data access. There are options for plug-ins for data preprocessing before storage. Publication of metadata to external applications such as the Earth Observing System Clearinghouse (ECHO) is also supported. S4PA includes a graphical user interface for monitoring the system operation and a tool for deploying the system. To ensure reliability, S4P continuously checks stored data for integrity, Further reliability is provided by tape backups of disks made once a disk partition is full and closed. The system is designed for low maintenance, requiring minimal operator oversight.

Lynnes, Christopher↗
NASA NTRS2023

Public Health Data Applications Using the CDC Tracking Network: Augmenting Environmental Hazard Information with Lower-latency NASA Data

Exposure to environmental hazards is an important determinant of health, and the frequency and severity of exposures is expected to be impacted by climate change. Through a partnership with the U.S. National Aeronautics and Space Administration, the U.S. Centers for Disease Control and Prevention’s National Environmental Public Health Tracking Network is integrating timely observations and model data of priority environmental hazards into its publicly accessible Data Explorer (https://ephtracking.cdc.gov/DataExplorer/). Newly integrated datasets over the contiguous U.S. (CONUS) include: daily 5-day forecasts of air quality based on the Goddard Earth Observing System Composition Forecast (GEOS-CF), daily historical (1980-present) concentrations of speciated PM2.5 based on the Modern Era Retrospective analysis for Research and Applications, version 2 (MERRA-2), and Moderate Resolution Imaging Spectroradiometer (MODIS) daily near real-time maps of flooding (MCDWD). Data integrated into the CDC Tracking Network are broadly intended to improve community health through action by informing both research and early warning activities, including (1) describing temporal and spatial trends in disease and potential environmental exposures, (2) identifying populations most affected, (3) generating hypotheses about associations between health and environmental exposures, and (4) developing, guiding, and assessing environmental public health policies and interventions aimed at reducing or eliminating health outcomes associated with environmental factors.

air quality↗
NASA NTRS2015

[Determine and Implement Updates to Be Made to MODEAR (Mission Operations Data Enterprise Architecture Repository)]

My main project was to determine and implement updates to be made to MODEAR (Mission Operations Data Enterprise Architecture Repository) process definitions to be used for CST-100 (Crew Space Transportation-100) related missions. Emphasis was placed on the scheduling aspect of the processes. In addition, I was to complete other tasks as given. Some of the additional tasks were: to create pass-through command look-up tables for the flight controllers, finish one of the MDT (Mission Operations Directorate Display Tool) displays, gather data on what is included in the CST-100 public data, develop a VBA (Visual Basic for Applications) script to create a csv (Comma-Separated Values) file with specific information from spreadsheets containing command data, create a command script for the November MCC-ASIL (Mission Control Center-Avionics System Integration Laboratory) testing, and take notes for one of the TCVB (Terminal Configured Vehicle B-737) meetings. In order to make progress in my main project I scheduled meetings with the appropriate subject matter experts, prepared material for the meetings, and assisted in the discussions in order to understand the process or processes at hand. After such discussions I made updates to various MODEAR processes and process graphics. These meetings have resulted in significant updates to the processes that were discussed. In addition, the discussions have helped the departments responsible for these processes better understand the work ahead and provided material to help document how their products are created. I completed my other tasks utilizing resources available to me and, when necessary, consulting with the subject matter experts. Outputs resulting from my other tasks were: two completed and one partially completed pass through command look-up tables for the fight controllers, significant updates to one of the MDT displays, a spreadsheet containing data on what is included in the CST-100 public data, a tool to create a csv file with specific information from spreadsheets containing command data, a command script for the November MCC-ASIL testing which resulted in a successful test day identifying several potential issues, and notes from one of the TCVB meetings that was used to keep the teams up to date on what was discussed and decided. I have learned a great deal working at NASA these last four months. I was able to meet and work with amazing individuals, further develop my technical knowledge, expand my knowledge base regarding human spaceflight, and contribute to the CST-100 missions. My work at NASA has strengthened my desire to continue my education in order to make further contributions to the field, and has given me the opportunity to see the advantages of a career at NASA.

Fanourakis, Sofia↗
NASA NTRS2011

Bit of History and Some Lessons Learned in Using NASA Remote Sensing Data in Public Health Applications

The NASA Applied Sciences Program's public health initiative began in 2004 to illustratethe potential benefits for using remote sensing in public health applications. Objectives/Purpose: The CDC initiated a st udy with NASA through the National Center for Environmental Health (NCEH) to establish a pilot effort to use remote sensing data as part of its Environmental Public Health Tracking Network (EPHTN). As a consequence, the NCEH and NASA developed a project called HELIX-Atlanta (Health and Environment Linkage for Information Exchange) to demonstrate a process for developing a local environmental public health tracking and surveillance network that integrates non-infectious health and environment systems for the Atlanta metropolitan area. Methods: As an ongo ing, systematic integration, analysis and interpretation of data, an EPHTN focuses on: 1 -- environmental hazards; 2 -- human exposure to environmental hazards; and 3 -- health effects potentially related to exposure to environmental hazards. To satisfy the definition of a surveillance system the data must be disseminated to plan, implement, and evaluate environmental public health action. Results: A close working r elationship developed with NCEH where information was exchanged to assist in the development of an EPHTN that incorporated NASA remote sensing data into a surveillance network for disseminating public health tracking information to users. This project?s success provided NASA with the opportunity to work with other public health entities such as the University of Mississippi Medical Center, the University of New Mexico and the University of Arizona. Conclusions: HELIX-Atlanta became a functioning part of the national EPHTN for tracking environmental hazards and exposure, particularly as related to air quality over Atlanta. Learning Objectives: 1 -- remote sensing data can be integral to an EPHTN; 2 -- public tracking objectives can be enhanced through remote sensing data; 3 -- NASA's involvement in public health applications can have wider benefits in the future.

Quattrochi, Dale A.↗
NASA NTRS2013

Candels Multi-Wavelength Catalogs: Source Detection and Photometry in the Goods-South Field

We present a UV to mid-infrared multi-wavelength catalog in the CANDELS/GOODS-S field, combining the newly obtained CANDELS HST/WFC3 F105W, F125W, and F160W data with existing public data. The catalog is based on source detection in the WFC3 F160W band. The F160W mosaic includes the data from CANDELS deep and wide observations as well as previous ERS and HUDF09 programs. The mosaic reaches a 5σ limiting depth (within an aperture of radius 0farcs17) of 27.4, 28.2, and 29.7 AB for CANDELS wide, deep, and HUDF regions, respectively. The catalog contains 34,930 sources with the representative 50% completeness reaching 25.9, 26.6, and 28.1 AB in the F160W band for the three regions. In addition to WFC3 bands, the catalog also includes data from UV (U band from both CTIO/MOSAIC and VLT/VIMOS), optical (HST/ACS F435W, F606W, F775W, F814W, and F850LP), and infrared (HST/WFC3 F098M, VLT/ISAAC Ks, VLT/HAWK-I Ks, and Spitzer/IRAC 3.6, 4.5, 5.8, 8.0 μm) observations. The catalog is validated via stellar colors, comparison with other published catalogs, zero-point offsets determined from the best-fit templates of the spectral energy distribution of spectroscopically observed objects, and the accuracy of photometric redshifts. The catalog is able to detect unreddened star-forming (passive) galaxies with stellar mass of 10(exp 10) M(sub ☉) at a 50% completeness level to z ~ 3.4 (2.8), 4.6 (3.2), and 7.0 (4.2) in the three regions. As an example of application, the catalog is used to select both star-forming and passive galaxies at z ~ 2-4 via the Balmer break. It is also used to study the color-magnitude diagram of galaxies at 0 < z < 4.

CATALOGS↗
NASA NTRS2006

Linking Asthma Exacerbation and Air Pollution Data: A Step Toward Public Health and Environmental Data Integration

Studies have shown that reducing exposure to triggers such as air pollutants can reduce symptoms and the need for medication in asthma patients. However, systems that track asthma are generally not integrated with those that track environmental hazards related to asthma. Tlvs lack of integration hinders public health awareness and responsiveness to these environmental triggers. The current study is a collaboration between health and environmental professionals to utilize NASA-derived environmental data to develop a decision support system (DSS) for asthma prediction, surveillance, and intervention. The investigators link asthma morbidity data from the University of Mississippi Medical Center (UMMC) and Mississippi Department of Health (MDH) with air quality data from the Mississippi Department of Environmental Quality (MDEQ) and remote sensing data from NASA. Daily ambient environmental hazard data for PM2.5 and ozone are obtained from the MDEQ air quality monitoring locations and are combined with remotely sensed data from NASA to develop a state-wide spatial and time series profile of environmental air quality. These data are then used to study the correlation of these measures of air quality variation with the asthma exacerbation incidence throughout the state over time. The goal is to utilize these readily available measures to allow real-time risk assessment for asthma exacerbations. GeoMedStat, a DSS previously developed for biosurveillance, will integrate these measures to monitor, analyze and report the real-time risk assessment for asthma exacerbation throughout the state.

Faruque, Fazlay↗
NASA NTRS2015

The Open Data Repositorys Data Publisher

Data management and data publication are becoming increasingly important components of researcher's workflows. The complexity of managing data, publishing data online, and archiving data has not decreased significantly even as computing access and power has greatly increased. The Open Data Repository's Data Publisher software strives to make data archiving, management, and publication a standard part of a researcher's workflow using simple, web-based tools and commodity server hardware. The publication engine allows for uploading, searching, and display of data with graphing capabilities and downloadable files. Access is controlled through a robust permissions system that can control publication at the field level and can be granted to the general public or protected so that only registered users at various permission levels receive access. Data Publisher also allows researchers to subscribe to meta-data standards through a plugin system, embargo data publication at their discretion, and collaborate with other researchers through various levels of data sharing. As the software matures, semantic data standards will be implemented to facilitate machine reading of data and each database will provide a REST application programming interface for programmatic access. Additionally, a citation system will allow snapshots of any data set to be archived and cited for publication while the data itself can remain living and continuously evolve beyond the snapshot date. The software runs on a traditional LAMP (Linux, Apache, MySQL, PHP) server and is available on GitHub (http://github.com/opendatarepository) under a GPLv2 open source license. The goal of the Open Data Repository is to lower the cost and training barrier to entry so that any researcher can easily publish their data and ensure it is archived for posterity.

Astrobiology data↗