A role for subducted super-hydrated kaolinite in Earth’s deep water cycle
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36 MATERIALS SCIENCE↗
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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.
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Structure and Function of the Acetylpolyamine Amidohydrolase from the Deep Earth Halophile Marinobacter subterrani
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99 GENERAL AND MISCELLANEOUS↗
Atomic-scale mixing between MgO and H2O in the deep interiors of water-rich planets
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99 GENERAL AND MISCELLANEOUS↗
Deep Point Cloud Building Envelope Segmentation (DeeP-CuBES) using Deep Learning
Building Information Modeling (BIM) plays an important role in building design and construction, particularly for achieving energy-efficient retrofits. Building envelope retrofits using panelized prefabricated system, such as those popularized by the Energiesprong program, need accurate as-built dimensions of facade features (windows, doors, etc.) to achieve the desired thermal and air tightness. Traditionally, building surveying is done manually, resulting in a time-consuming and labor-intensive process. Recently, 3D point clouds from terrestrial LiDAR have been used to automate the generation of as-built dimensions of existing buildings. However, automated BIM using LiDAR relies on solving the point cloud semantic segmentation (PCSS) problem. In this work, we propose a robust pipeline for solving the PCSS problem using deep neural networks, focusing on overcoming challenges posed by imbalanced datasets and complex architectural features. We introduce the first high-density, labeled, and validated building envelope point cloud dataset derived from multiple building scans, specifically curated to tackle challenges in facade-level segmentation. Results from the trained neural networks show that advanced attention-based architectures and incorporating radiometry (light intensity and RGB) features significantly boost segmentation accuracy for windows and doors.
Selvakumar, Balaji [ORNL]↗
Are Deep Energy Retrofits in Commercial Buildings Including Window Upgrades?
U.S. Commercial buildings account for about 20% of total U.S. energy consumption. Because the thermal performance of windows significantly affects building energy efficiency and HVAC system performance, best practice guidance often includes window and envelope improvements in conjunction with HVAC upgrades to optimize energy use and improve occupant comfort. It is an open question, however, regarding how often these best practices are implemented in the field. This paper aims to address that gap by conducting a literature review and a series of interviews with commercial building auditing and management professionals to explore the factors that drive window retrofits in commercial buildings. The paper explores a range of case studies from deep energy retrofits across the globe, comparing projects with and without window retrofits. The primary goals of this review are to: (1) provide data from real-world case studies illustrating the role of windows in deep energy renovations and HVAC upgrades, (2) conduct retrofit cost analyses for windows and high-performance HVAC systems and (3) offer insights into how window upgrade decisions are made and when they are implemented as part of deep energy retrofits. Most of the retrofit studies focused exclusively on high performance HVAC upgrades without considering how window upgrades might further enhance the overall energy efficiency of commercial buildings. Interviews with building industry experts shed light on the key factors influencing deep energy retrofit decisions and what factors tip the scales in favor of including window measures with more comprehensive retrofit projects.
Cort, Katherine↗
Hyperspectral Image Target Detection Using Deep Ensembles for Robust Uncertainty Quantification.
Abstract not provided.
Sahay, Rajeev↗
Deep learning for automated defect detection in high-reliability electronic parts.
Abstract not provided.
Donahue, Emily↗
Ice-VII inclusions in diamonds: Evidence for aqueous fluid in Earth’s deep mantle
Water-rich regions in Earth’s deeper mantle are suspected to play a key role in the global water budget and the mobility of heat-generating elements. Here, we show that ice-VII occurs as inclusions in natural diamond and serves as an indicator for such water-rich regions. Ice-VII, the residue of aqueous fluid present during growth of diamond, crystallizes upon ascent of the host diamonds but remains at pressures as high as 24 gigapascals; it is now recognized as a mineral by the International Mineralogical Association. In particular, ice-VII in diamonds points toward fluid-rich locations in the upper transition zone and around the 660-kilometer boundary.
58 GEOSCIENCES↗
Prediction of histone post-translational modifications using deep learning
Abstract Motivation Histone post-translational modifications (PTMs) are involved in a variety of essential regulatory processes in the cell, including transcription control. Recent studies have shown that histone PTMs can be accurately predicted from the knowledge of transcription factor binding or DNase hypersensitivity data. Similarly, it has been shown that one can predict PTMs from the underlying DNA primary sequence. Results In this study, we introduce a deep learning architecture called DeepPTM for predicting histone PTMs from transcription factor binding data and the primary DNA sequence. Extensive experimental results show that our deep learning model outperforms the prediction accuracy of the model proposed in Benveniste et al. (PNAS 2014) and DeepHistone (BMC Genomics 2019). The competitive advantage of our framework lies in the synergistic use of deep learning combined with an effective pre-processing step. Our classification framework has also enabled the discovery that the knowledge of a small subset of transcription factors (which are histone-PTM and cell-type-specific) can provide almost the same prediction accuracy that can be obtained using all the transcription factors data. Availabilityand implementation https://github.com/dDipankar/DeepPTM. Supplementary information Supplementary data are available at Bioinformatics online.
Baisya, Dipankar Ranjan (ORCID:0000000267847359)↗
Where’s Swimmy?: Mining unique color features buried in galaxies by deep anomaly detection using Subaru Hyper Suprime-Cam data
Abstract We present the Swimmy (Subaru WIde-field Machine-learning anoMalY) survey program, a deep-learning-based search for unique sources using multicolored (grizy) imaging data from the Hyper Suprime-Cam Subaru Strategic Program (HSC-SSP). This program aims to detect unexpected, novel, and rare populations and phenomena, by utilizing the deep imaging data acquired from the wide-field coverage of the HSC-SSP. This article, as the first paper in the Swimmy series, describes an anomaly detection technique to select unique populations as “outliers” from the data-set. The model was tested with known extreme emission-line galaxies (XELGs) and quasars, which consequently confirmed that the proposed method successfully selected $\sim\!\! 60\%$–$70\%$ of the quasars and $60\%$ of the XELGs without labeled training data. In reference to the spectral information of local galaxies at z = 0.05–0.2 obtained from the Sloan Digital Sky Survey, we investigated the physical properties of the selected anomalies and compared them based on the significance of their outlier values. The results revealed that XELGs constitute notable fractions of the most anomalous galaxies, and certain galaxies manifest unique morphological features. In summary, deep anomaly detection is an effective tool that can search rare objects, and, ultimately, unknown unknowns with large data-sets. Further development of the proposed model and selection process can promote the practical applications required to achieve specific scientific goals.
Astronomy & Astrophysics↗
DeepLearnMOR: a deep-learning framework for fluorescence image-based classification of organelle morphology
Abstract The proper biogenesis, morphogenesis, and dynamics of subcellular organelles are essential to their metabolic functions. Conventional techniques for identifying, classifying, and quantifying abnormalities in organelle morphology are largely manual and time-consuming, and require specific expertise. Deep learning has the potential to revolutionize image-based screens by greatly improving their scope, speed, and efficiency. Here, we used transfer learning and a convolutional neural network (CNN) to analyze over 47,000 confocal microscopy images from Arabidopsis wild-type and mutant plants with abnormal division of one of three essential energy organelles: chloroplasts, mitochondria, or peroxisomes. We have built a deep-learning framework, DeepLearnMOR (Deep Learning of the Morphology of Organelles), which can rapidly classify image categories and identify abnormalities in organelle morphology with over 97% accuracy. Feature visualization analysis identified important features used by the CNN to predict morphological abnormalities, and visual clues helped to better understand the decision-making process, thereby validating the reliability and interpretability of the neural network. This framework establishes a foundation for future larger-scale research with broader scopes and greater data set diversity and heterogeneity.
Plant Sciences↗
SEDS: The Spitzer Extended Deep Survey. Survey Design, Photometry, and Deep IRAC Source Counts
The Spitzer Extended Deep Survey (SEDS) is a very deep infrared survey within five well-known extragalactic science fields: the UKIDSS Ultra-Deep Survey, the Extended Chandra Deep Field South, COSMOS, the Hubble Deep Field North, and the Extended Groth Strip. SEDS covers a total area of 1.46 deg(exp 2) to a depth of 26 AB mag (3sigma) in both of the warm Infrared Array Camera (IRAC) bands at 3.6 and 4.5 micron. Because of its uniform depth of coverage in so many widely-separated fields, SEDS is subject to roughly 25% smaller errors due to cosmic variance than a single-field survey of the same size. SEDS was designed to detect and characterize galaxies from intermediate to high redshifts (z = 2-7) with a built-in means of assessing the impact of cosmic variance on the individual fields. Because the full SEDS depth was accumulated in at least three separate visits to each field, typically with six-month intervals between visits, SEDS also furnishes an opportunity to assess the infrared variability of faint objects. This paper describes the SEDS survey design, processing, and publicly-available data products. Deep IRAC counts for the more than 300,000 galaxies detected by SEDS are consistent with models based on known galaxy populations. Discrete IRAC sources contribute 5.6 +/- 1.0 and 4.4 +/- 0.8 nW / square m/sr at 3.6 and 4.5 micron to the diffuse cosmic infrared background (CIB). IRAC sources cannot contribute more than half of the total CIB flux estimated from DIRBE data. Barring an unexpected error in the DIRBE flux estimates, half the CIB flux must therefore come from a diffuse component.
Spitzer↗
Deep Neural Network High Spatiotemporal Resolution Precipitation Estimation (Deep-STEP) Using Passive Microwave and Infrared Data
Recent developments in “headline-making” deep neural networks (DNNs), specifically convolutional neural networks (CNNs), along with advancements in computational power, open great opportunities to integrate massive amounts of real-time observations to characterize spatiotemporal structures of surface precipitation. This study aims to develop a CNN algorithm, named Deep Neural Network High Spatiotemporal Resolution Precipitation Estimation (Deep-STEP), that ingests direct satellite passive microwave (PMW) brightness temperatures (Tbs) at emission and scattering frequencies combined with infrared (IR) Tbs from geostationary satellites and surface information to automatically extract geospatial features related to the precipitable clouds. These features allow the end-to-end Deep-STEP algorithm to instantaneously map surface precipitation intensities with a spatial resolution of 4 km. The main advantages of Deep-STEP, as compared to current state-of-the-art techniques, are 1) it learns and estimates complex precipitation systems directly from raw measurements in near–real time, 2) it uses the automatic spatial neighborhood feature extraction approach, and 3) it fuses coarse-resolution PMW footprints with IR images to reliably retrieve surface precipitation at a high spatial resolution. We anticipate our proposed DNN algorithm to be a starting point for more sophisticated and efficient precipitation retrieval systems in terms of accuracy, fine spatial pattern detection skills, and computational costs.
54 ENVIRONMENTAL SCIENCES↗
Neural Scaling Laws of Deep ReLU and Deep Operator Network: A Theoretical Study
Neural scaling laws play a pivotal role in the performance of deep neural networks and have been observed in a wide range of tasks. However, a complete theoretical framework for understanding these scaling laws remains underdeveloped. In this paper, we explore the neural scaling laws for deep operator networks, which involve learning mappings between function spaces, with a focus on the Chen and Chen style architecture. These approaches, which include the popular Deep Operator Network (DeepONet), approximate the output functions using a linear combination of learnable basis functions and coefficients that depend on the input functions. We establish a theoretical framework to quantify the neural scaling laws by analyzing its approximation and generalization errors. We articulate the relationship between the approximation and generalization errors of deep operator networks and key factors such as network model size and training data size. Moreover, we address cases where input functions exhibit low-dimensional structures, allowing us to derive tighter error bounds. These results also hold for deep ReLU networks and other similar structures. Our results offer a partial explanation of the neural scaling laws in operator learning and provide a theoretical foundation for their applications.
97 MATHEMATICS AND COMPUTING↗
Seasonal variation of shallow-to-deep convection transition and its link to the environmental conditions over the Central Amazon: Shallow-to-Deep Convection Transition
This study aims to characterize the seasonal variation of the shallow-to-deep convection transition and understand how environmental conditions impact the behavior of this transition using data collected from the Observations and Modeling of the Green Ocean Amazon (GOAmazon) field campaign in the Central Amazon (Manaus). The diurnal cycle of the rain/cloud fraction shows that the wet season has more extensive shallow convection before the transition to deep convection with larger fractional coverage and rainfall; deep convection in the transition season is more intense and has higher vertical extension and a stronger updraft. Surface meteorology, atmospheric moisture, instability, and wind shear are contrasted for the shallow/congestus convection (SC) cases and the locally formed shallow-to-deep convection transition (LD) cases. The comparisons suggest that occurrence of the LD is generally promoted under the conditions of high atmospheric moisture and instability but has a weaker dependence on wind shear. The relative importance of these environmental controls also varies in different seasons: The dry and transition seasons require a deeper moist layer from the boundary layer to midtroposphere than the wet season; convective available potential energy (CAPE) is higher during the transition season, but it is a less important factor for shallow-to-deep convection transition than in other seasons; LD only has significantly larger wind shears than SC during the dry season.
54 ENVIRONMENTAL SCIENCES↗
Evolving Deep Networks Using HPC
While a large number of deep learning networks have been studiedand published that produce outstanding results on natural imagedatasets, these datasets only make up a fraction of those to whichdeep learning can be applied. These datasets include text data, audiodata, and arrays of sensors that have very different characteristicsthan natural images. As these “best” networks for natural imageshave been largely discovered through experimentation and cannotbe proven optimal on some theoretical basis, there is no reasonto believe that they are the optimal network for these drasticallydifferent datasets. Hyperparameter search is thus often a very im-portant process when applying deep learning to a new problem. Inthis work we present an evolutionary approach to searching thepossible space of network hyperparameters and construction thatcan scale to 18, 000 nodes. This approach is applied to datasets ofvarying types and characteristics where we demonstrate the abilityto rapidly find best hyperparameters in order to enable practitionersto quickly iterate between idea and result.
Young, Steven↗
The Future of the Deep Space Network: Technology Development for K2-Band Deep Space Communications
Projections indicate that in the future the number of NASA's robotic deep space missions is likely to increase significantly. A launch rate of up to 4-6 launches per year is projected with up to 25 simultaneous missions active [I]. Future high resolution mapping missions to other planetary bodies as well as other experiments are likely to require increased downlink capacity. These future deep space communications requirements will, according to baseline loading analysis, exceed the capacity of NASA's Deep Space Network in its present form. There are essentially two approaches for increasing the channel capacity of the Deep Space Network. Given the near-optimum performance of the network at the two deep space communications bands, S-Band (uplink 2.025-2.120 GHz, downlink 2.2-2.3 GHz), and X-Band (uplink 7.145-7.19 GHz, downlink 8.48.5 GHz), additional improvements bring only marginal return for the investment. Thus the only way to increase channel capacity is simply to construct more antennas, receivers, transmitters and other hardware. This approach is relatively low-risk but involves increasing both the number of assets in the network and operational costs.
Bhanji, Alaudin M.↗
Results of the Deep Space Atomic Clock Deep Space Navigation Analog Experiment
The timing and frequency stability provided by the Deep Space Atomic Clock (DSAC) is almost comparable with the Deep Space Network’s ground clocks, and will enable one-way radiometric measurements with accuracy equivalent to cur- rent two-way tracking data. A demonstration unit of the clock was launched into low Earth orbit on June 25, 2019, for the purpose of validating DSAC’s perfor- mance in the space environment. GPS data collected throughout the mission was utilized not only for precise clock estimation, but also as a proxy for deep space tracking data to conduct the Deep Space Navigation Analog Experiment. Through careful processing of GPS Doppler data and limited modeling fidelity representa- tive of deep space navigation capabilities, the analog orbit solutions are compared to higher-fidelity solutions, demonstrating DSAC’s viability as a navigation instru- ment in conditions typical for a low altitude Mars orbiter.
Stuart, Jeffrey↗