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At least 19 records
All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

Contribution of Tibetan Plateau ecosystems to local and remote precipitation through moisture recycling

The ecosystems of the Tibetan Plateau (TP) provide multiple important ecosystem services that benefit both local populations and those beyond, such as through climate regulation services on precipitation for East Asia and China. However, the precipitation regulation service of the TP ecosystems for supplying moisture and maintaining precipitation is yet to be evaluated. In this study, we used the moisture recycling framework and a moisture tracking model to quantify the precipitation regulation services of TP ecosystems for their contribution to precipitation. We found TP ecosystems contributed substantially to local and downwind precipitation, with a declined contribution from 221 mm/year for the TP and neighboring areas, to <10 mm/year for eastern China and other surrounding countries. Among ecosystem types, grassland contributed most to precipitation, followed by barren and snow lands, forests, and shrublands. In terms of seasonality, precipitation contribution from TP ecosystems was greater in summer months than in non-summer months for western China, while the opposite was true for eastern China – though the magnitude was much smaller. Over the past two decades, the significant evapotranspiration increases in TP translated to a widespread increase in precipitation contribution for TP and downwind beneficiary regions from 2000 to 2020. Our study provides a quantitative way to understand the precipitation regulation services of TP ecosystems through moisture recycling, substantiating their key role to safeguard precipitation and the water cycle for downwind regions– effectively acting as an ecological security shelter that could be perceived by the public.

Li, Yan↗
NASA NTRS2021

Ecosystem age-class dynamics and distribution in the LPJ-wsl v2.0 global ecosystem model

Forest ecosystem processes follow classic responses with age, peaking production around canopy closure and declining thereafter. Although age dynamics might be more dominant in certain regions over others, demographic effects on net primary production (NPP) and heterotrophic respiration (Rh) are bound to exist. Yet, explicit representation of ecosystem demography is notably absent in many global ecosystem models. This is concerning because the global community relies on these models to regularly update our collective understanding of the global carbon cycle. This paper aims to present the technical developments of a computationally efficient approach for representing age-class dynamics within a global ecosystem model, the Lund–Potsdam–Jena – Wald, Schnee, Landschaft version 2.0 (LPJ-wsl v2.0) dynamic global vegetation model and to determine if explicit representation of demography influenced ecosystem stocks and fluxes at global scales or at the level of a grid cell. The modeled age classes are initially created by simulated fire and prescribed wood harvesting or abandonment of managed land, otherwise aging naturally until an additional disturbance is simulated or prescribed. In this paper, we show that the age module can capture classic demographic patterns in stem density and tree height compared to inventory data, and that simulated patterns of ecosystem function follow classic responses with age. We also present two scientific applications of the model to assess the modeled age-class distribution over time and to determine the demographic effect on ecosystem fluxes relative to climate. Simulations show that, between 1860 and 2016, zonal age distribution on Earth was driven predominately by fire, causing a 45- to 60-year difference in ages between older boreal (50–90° N) and younger tropical (23° S–23° N) ecosystems. Between simulation years 1860 and 2016, land-use change and land management were responsible for a decrease in zonal age by −6 years in boreal and by −21 years in both temperate (23–50° N) and tropical latitudes, with the anthropogenic effect on zonal age distribution increasing over time. A statistical model helped to reduce LPJ-wsl v2.0 complexity by predicting per-grid-cell annual NPP and Rh fluxes by three terms: precipitation, temperature, and age class; at global scales, R2 was between 0.95 and 0.98. As determined by the statistical model, the demographic effect on ecosystem function was often less than 0.10 kg C/sq. myr but as high as 0.60 kg C/sq. myr where the effect was greatest. In the eastern forests of North America, the simulated demographic effect was of similar magnitude, or greater than, the effects of climate; simulated demographic effects were similarly important in large regions of every vegetated continent. Simulated spatial datasets are provided for global ecosystem ages and the estimated coefficients for effects of precipitation, temperature and demography on ecosystem function. The discussion focuses on our finding of an increasing role of demography in the global carbon cycle, the effect of demography on relaxation times (resilience) following a disturbance event and its implications at global scales, and a finding of a 40 Pg C increase in biomass turnover when including age dynamics at global scales. Whereas time is the only mechanism that increases ecosystem age, any additional disturbance not explicitly modeled will decrease age. The LPJ-wsl v2.0 age module represents another step forward towards understanding the role of demography in global ecosystems.

LPJ-wsl↗
DOE OSTI2024

The Ecosystem as Super-Organ/ism, Revisited: Scaling Hydraulics to Forests under Climate Change

Synopsis Classic debates in community ecology focused on the complexities of considering an ecosystem as a super-organ or organism. New consideration of such perspectives could clarify mechanisms underlying the dynamics of forest carbon dioxide (CO2) uptake and water vapor loss, important for predicting and managing the future of Earth’s ecosystems and climate system. Here, we provide a rubric for considering ecosystem traits as aggregated, systemic, or emergent, i.e., representing the ecosystem as an aggregate of its individuals or as a metaphorical or literal super-organ or organism. We review recent approaches to scaling-up plant water relations (hydraulics) concepts developed for organs and organisms to enable and interpret measurements at ecosystem-level. We focus on three community-scale versions of water relations traits that have potential to provide mechanistic insight into climate change responses of forest CO2 and H2O gas exchange and productivity: leaf water potential (Ψcanopy), pressure volume curves (eco-PV), and hydraulic conductance (Keco). These analyses can reveal additional ecosystem-scale parameters analogous to those typically quantified for leaves or plants (e.g., wilting point and hydraulic vulnerability) that may act as thresholds in forest responses to drought, including growth cessation, mortality, and flammability. We unite these concepts in a novel framework to predict Ψcanopy and its approaching of critical thresholds during drought, using measurements of Keco and eco-PV curves. We thus delineate how the extension of water relations concepts from organ- and organism-scales can reveal the hydraulic constraints on the interaction of vegetation and climate and provide new mechanistic understanding and prediction of forest water use and productivity.

Zoology↗
DOE OSTI2019

Transferring biodiversity-ecosystem function research to the management of ‘real-world’ ecosystems

Biodiversity-ecosystem functioning (BEF) research rose quickly following concerns that biodiversity loss would negatively affect ecosystem functions and the ecosystem services they underpin. However, despite evidence that biodiversity strongly affects ecosystem functioning, the influence of BEF research upon policy and the management of ‘real-world’ ecosystems, i.e., semi-natural habitats and agroecosystems, has been limited. In this work, we address this concern by classifying BEF research into three clusters based on the degree of human control over species composition and the spatial scale, in terms of grain, of the study, and discussing how the research of each cluster is best suited to inform particular fields of ecosystem management. Research in the first cluster, small-grain highly controlled studies, is best able to provide general insights into mechanisms and to inform the management of species-poor and highly managed systems such as croplands, plantations, and the restoration of heavily degraded ecosystems. Research from the second cluster, small-grain observational studies, and species removal and addition studies, may allow for direct predictions of the impacts of species loss in specific semi-natural ecosystems. Research in the third cluster, large-grain uncontrolled studies, may best inform landscape-scale management and national-scale policy. We discuss barriers to transfer within each cluster and suggest how new research and knowledge exchange mechanisms may overcome these challenges. To meet the potential for BEF research to address global challenges, we recommend transdisciplinary research that goes beyond these current clusters and considers the social-ecological context of the ecosystems in which BEF knowledge is generated. This requires recognizing the social and economic value of biodiversity for ecosystem services at scales, and in units, that matter to land managers and policy makers.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2018

Compound fire-drought regimes promote ecosystem transitions in Mediterranean ecosystems

Understanding ecosystem responses to compound disturbance regimes and the influence of specific sequences of events in determining ecosystem shifts remains a challenge. We use a modelling framework for Mediterranean-type ecosystems to assess the effects of fire–drought interactions on long-term vegetation dynamics and to identify disturbance-driven changes in trait composition (tree seeder vs. tree resprouter prevalence) and ecosystem state (forest vs. non-forest). Changes in tree seeder and the tree resprouter dominance show nonlinear, threshold-type trends over gradients of increasing compound disturbance frequency. Vegetation composition thresholds mostly occur in a narrow range of the compound fire–drought disturbance space. Additionally, trait compositional switches and the likelihood of sudden changes in ecosystem state are promoted by fire-drought interactions. Distinct sequences of disturbance events cause vegetation transitions, disrupting ecosystem resilience, even under moderate recurrence of individual disturbances. An extreme drought year followed by one or two large fire events promotes shifts from resprouter- to seeder dominance. Contrastingly, a large crown fire followed by an extreme drought promotes changes from seeder to resprouter dominance. This disturbance sequence is also a mechanism strong enough to trigger sudden shifts in ecosystem state (from forest to non-forest). Synthesis. Thresholds of change in vegetation composition occur over a narrow range of the modelled gradients of compound fire-drought recurrence, and the loss of ecosystem resilience is contingent on particular sequences of disturbance events. Overall, our findings highlight that disturbance interactions define the relative location of tipping points in ecosystem state, and that effects and feedbacks of compound disturbance regimes increase the long-term likelihood of sudden ecosystem shifts and, therefore, uncertainty in predicting vegetation state.

54 ENVIRONMENTAL SCIENCES↗
NASA NTRS2022

A Conceptual Framework to Integrate Biodiversity, Ecosystem Function, and Ecosystem Service Models

Global biodiversity and ecosystem service models typically operate independently. Ecosystem service projections may therefore be overly optimistic because they do not always account for the role of biodiversity in maintaining ecological functions. We review models used in recent global model intercomparison projects and develop a novel model integration framework to more fully account for the role of biodiversity in ecosystem function, a key gap for linking biodiversity changes to ecosystem services. We propose two integration pathways. The first uses empirical data on biodiversity–ecosystem function relationships to bridge biodiversity and ecosystem function models and could currently be implemented globally for systems and taxa with sufficient data. We also propose a trait-based approach involving greater incorporation of biodiversity into ecosystem function models. Pursuing both approaches will provide greater insight into biodiversity and ecosystem services projections. Integrating biodiversity, ecosystem function, and ecosystem service modeling will enhance policy development to meet global sustainability goals.

biodiversity models↗
DOE OSTI2018

Inter-annual variability of net and gross ecosystem carbon fluxes: A review

As the lifetime of regional flux networks approach twenty years, there is a growing number of papers that have published long term records (5 years or more) of net carbon fluxes between ecosystems and the atmosphere. Unanswered questions from this body of work are: 1) how variable are carbon fluxes on a year to year basis?; 2) what are the biophysical factors that may cause interannual variability and/or temporal trends in carbon fluxes?; and 3) how does the biophysical control on this carbon flux variability differ by climate and ecological spaces? To address these questions, we surveyed published data from 59 sites that reported on five or more years of continuous measurements, yielding 544 site-years of data. We found that the standard deviation of the interannual variability in net ecosystem carbon exchange (162 gC m -2 y -1 ) is large relative to its population mean (-200 gC m -2 y -1 ). Broad-leaved evergreen forests and crops experienced the greatest absolute variability in interannual net carbon exchange (greater than ±300 gC m -2 y -1 ) and boreal evergreen forests and maritime wetlands were among the least variable (less than ±40 gC m -2 y -1 ). A disproportionate fraction of the yearly variability in net ecosystem exchange was associated with biophysical factors that modulated ecosystem photosynthesis rather than ecosystem respiration. Yet, there was appreciable and statistically significant covariance between ecosystem photosynthesis and respiration. Consequently, biophysical conditions that conspired to increase ecosystem photosynthesis to from one year to the next were associated with an increase in ecosystem respiration, and vice versa; on average, the year to year change in respiration was 40% as large as the year to year change in photosynthesis. The analysis also identified sets of ecosystems that are on the verge of switching from being carbon sinks to carbon sources. These include sites in the Arctic tundra, the evergreen forests in the Pacific northwest and some grasslands, where year to year changes in respiration are outpacing those in photosynthesis. While a select set of climatic and ecological factors (e.g. light, rainfall, temperature, phenology) played direct and indirect roles on this variability, their impact differed conditionally, as well as by climate and ecological spaces. For example, rainfall had both positive and negative effects. Deficient rainfall caused a physiological decline in photosynthesis in temperate and semi-arid regions. Too much rain, in the humid tropics, limited photosynthesis by limiting light. In peatlands and tundra, excess precipitation limited ecosystem respiration when it raised the water table to the surface. For deciduous forests, warmer temperatures lengthened the growing season, increasing photosynthesis, but this effect also increased soil respiration. Finally, statistical analysis was performed to evaluate the detection limit of trends; we computed the confidence intervals of trends in multi-year carbon fluxes that need to be resolved to conclude whether the differences are to be attributed to randomness or biophysical forcings. Ongoing studies and reports on interannual variations need to consider the role of the duration of the time series on random errors when quantifying potential trends and extreme events.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2018

Guidelines and considerations for designing field experiments simulating precipitation extremes in forest ecosystems

1. Precipitation regimes are changing in response to climate change, yet understanding of how forest ecosystems respond to extreme droughts and pluvials remains incomplete. As future precipitation extremes will likely fall outside the range of historical variability, precipitation manipulation experiments (PMEs) are critical to advancing knowledge about potential ecosystem responses. However, few PMEs have been conducted in forests compared to short-statured ecosystems, and forest PMEs have unique design requirements and constraints. Moreover, past forest PMEs have lacked coordination, limiting cross-site comparisons. Here, we review and synthesize approaches, challenges, and opportunities for conducting PMEs in forests, with the goal of guiding design decisions, while maximizing the potential for coordination. 2. We reviewed 63 forest PMEs at 70 sites world-wide. Workshops, meetings, and communications with experimentalists were used to generate and build consensus around approaches for addressing the key challenges and enhancing coordination. 3. Past forest PMEs employed a variety of study designs related to treatment level, replication, plot and infrastructure characteristics, and measurement approaches.Important considerations for establishing new forest PMEs include: selecting appropriate treatment levels to reach ecological thresholds; balancing cost, logistical complexity, and effectiveness in infrastructure design; and preventing unintended water subsidies. Response variables in forest PMEs were organized into three broad tiers reflecting increasing complexity and resource intensiveness, with the first tier representing a recommended core set of common measurements. 4. Differences in site conditions combined with unique research questions of experimentalists necessitate careful adaptation of guidelines for forest PMEs to balance local objectives with coordination among experiments. We advocate adoption of a common framework for coordinating forest PME design to enhance cross-site comparability and advance fundamental knowledge about the response and sensitivity of diverse forest ecosystems to precipitation extremes.

Climate Extremes, drought, ecological thresholds, ↗
DOE OSTI2025

Maps of growing season gross primary production and net ecosystem exchange for Council Road Mile Marker 71, Seward Peninsula, Alaska, [2017-2023]

This data archive is in support of the Next-Generation Ecosystem Experiments in the Arctic (NGEE Arctic) publication "Integrating Characteristic Arctic Vegetation in a Land Surface Model Improves Representation of Carbon Dynamics Across a Tundra Landscape", by Murphy et al. (2025a). Murphy et al. (2025a) evaluated whether incorporating observed Arctic vegetation heterogeneity into ELM, the land model of the Department of Energy’s Energy Exascale Earth System Model (E3SM), improved simulations of tundra carbon cycling. The associated model archive can be found at Murphy et al. (2025b). The study focused on the spatial patterns and net landscape-level growing season productivity and carbon uptake. As part of this evaluation, observationally derived maps of average growing season (June–August) net ecosystem exchange (NEE) and gross primary production (GPP) were developed for the same domain. These maps, which form the dataset described here, integrate eddy covariance flux tower, remote sensing, and vegetation community data to provide spatially explicit benchmarks for model evaluation. The maps provide spatially explicit estimates of average growing season NEE and GPP across 13 tundra vegetation communities within the study domain. By combining flux tower observations with Airborne Visible-Infrared Imaging Spectrometer-Next Generation (AVIRIS-NG) hyperspectral imagery and drone-based normalized difference vegetation index (NDVI), these maps capture the heterogeneity of carbon fluxes associated with different Arctic vegetation types. While they represent average seasonal conditions rather than interannual variability, the maps provide a unique dataset for evaluating model performance, comparing vegetation community contributions to landscape-scale carbon cycling, and supporting regional analyses of Arctic carbon dynamics. This data archive contains 5 m resolution maps of vegetation communities, vegetation community average growing season GPP, and vegetation community average growing season NEE (three *.tif files), a User’s Guide (*pdf file), and Table 1 of the User’s Guide displaying vegetation community coverage and average growing season NEE and GPP values (*.csv file).

Murphy, Bailey [ORNL] (ORCID:0000000203995221)↗
DOE OSTI2018

Impacts of droughts and extreme-temperature events on gross primary production and ecosystem respiration: a systematic assessment across ecosystems and climate zones

Extreme climatic events, such as droughts and heat stress, induce anomalies in ecosystem–atmosphere CO 2 fluxes, such as gross primary production (GPP) and ecosystem respiration (R eco ), and, hence, can change the net ecosystem carbon balance. However, despite our increasing understanding of the underlying mechanisms, the magnitudes of the impacts of different types of extremes on GPP and R eco within and between ecosystems remain poorly predicted. Here we aim to identify the major factors controlling the amplitude of extreme-event impacts on GPP, R eco , and the resulting net ecosystem production (NEP). We focus on the impacts of heat and drought and their combination. We identified hydrometeorological extreme events in consistently downscaled water availability and temperature measurements over a 30-year time period. We then used FLUXNET eddy covariance flux measurements to estimate the CO 2 flux anomalies during these extreme events across dominant vegetation types and climate zones. Overall, our results indicate that short-term heat extremes increased respiration more strongly than they downregulated GPP, resulting in a moderate reduction in the ecosystem's carbon sink potential. In the absence of heat stress, droughts tended to have smaller and similarly dampening effects on both GPP and R eco and, hence, often resulted in neutral NEP responses. The combination of drought and heat typically led to a strong decrease in GPP, whereas heat and drought impacts on respiration partially offset each other. Taken together, compound heat and drought events led to the strongest C sink reduction compared to any single-factor extreme. A key insight of this paper, however, is that duration matters most: for heat stress during droughts, the magnitude of impacts systematically increased with duration, whereas under heat stress without drought, the response of R eco over time turned from an initial increase to a downregulation after about 2 weeks. This confirms earlier theories that not only the magnitude but also the duration of an extreme event determines its impact. Our study corroborates the results of several local site-level case studies but as a novelty generalizes these findings on the global scale. Specifically, we find that the different response functions of the two antipodal land–atmosphere fluxes GPP and R eco can also result in increasing NEP during certain extreme conditions. Apparently counterintuitive findings of this kind bear great potential for scrutinizing the mechanisms implemented in state-of-the-art terrestrial biosphere models and provide a benchmark for future model development and testing.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2025

DVMDOSTEM v0.8.3: a terrestrial ecosystem model designed to represent arctic, boreal and permafrost ecosystem dynamics

The impacts of climate change on natural ecosystems are the result of complex physical and ecological processes operating and interacting at a variety of spatio-temporal scales, that can be represented in process-based ecosystem models. DVMDOSTEM is an advanced process-based terrestrial ecosystem model (TEM) designed to study ecosystem responses to climate changes and disturbances. It has a particular focus on permafrost regions (i.e. regions characterized by soils that stay partially frozen all year round for at least two consecutive years), encompassing boreal, arctic, and alpine landscapes. The model couples two previous versions of the Terrestrial Ecosystem Model (TEM) (McGuire et al., 1992): DVMTEM that includes a dynamic vegetation module (DVM) (E. S. Euskirchen et al., 2009), and DOSTEM that includes a dynamic organic soil module (DOS) (H. Genet et al., 2013; Yi et al., 2010). DVMDOSTEM simulates processes at yearly and monthly scales, with some physical processes operating at an even finer temporal resolution. Its versatility allows for site-specific to regional simulations, making it valuable for predicting shifts in permafrost, vegetation, and carbon (C) and nitrogen (N) dynamics. While DVMDOSTEM has been described in the methods sections of many manuscripts, this paper is the first stand alone description of DVMDOSTEM, independent of a particular scientific investigation.

Carman, Tobey B. [Univ. of Alaska, Fairbanks, AK (↗
NASA NTRS2018

An Evolutionary Computation System Design Concept for Developing Controlled Closed Ecosystems: An Intelligent Systems Approach to Foster Gravitational Ecosystem Research for Developing Sustainable Communities in Space and on Earth

An adjustably-autonomous intelligent systems approach for developing Closed Ecosystems (CESs) is presented, which includes a design concept and preliminary design details for the Controlled Closed-Ecosystem Development System (CCEDS) and the Orbiting Modular Artificial-Gravity Spacecraft (OMAGS). The paper is divided into three sections: CESs, the CCEDS Design Concept, and Orbiting Fractional-Gravity Closed Ecosystems OMAGS design concept. The first section briefly describes Closed EcoSystems (CESs), complex adaptive systems, biomes, microbial microbiomes, and their relevance for the study of astrobiology. This section also discusses initial efforts in the development of Closed Environment Life Support Systems (CELSSs) for sustainable communities in space and on Earth. This section concludes with a discussion of the bioregenerative life support system challenge of and the corresponding consequences due to the inverse relationship of the very small human biomass/non-human biomass ratio overall on the Earth with respect to the extremely large human biomass/non-human-biomass ratio found in cities and the International Space Station. The second section describes the CCEDS design concept, which consists of a population of controlled colonies of CES Modules (CESMs), each an integrated CES, continually generating data for an intelligent system that operates the CESs and their CESMs. A variety of CESM types and their use are briefly described. The CCEDS intelligent system uses an evolutionary computation algorithm described in this section to develop and optimize these CESs to increase their viability duration and the size of the animals they support with the ultimate goal to support populations of humans, both on Earth and in space. The CCEDS architecture, its five control subsystems, and its five evolutionary computation levels are also discussed. The section concludes with a discussion of several CCEDS design strategies. The third section summarizes the OMAGS design concept for a spacecraft with a payload consisting of CESs in an orbiting spacecraft centrifuge that operates for at least 5 years. The spacecraft concept is described including its 150cm-radius centrifuge with a 2 ton & 3,000 liter bioscience payload capacity for 24 CESMs. The centrifuge design has four physical levels for its CESMs, each level subject to a different fractional gravity level. This section presents the spacecraft benefits of being designed and operated such that the spacecraft and payload centrifuge wheel counter-rotate resulting in net zero angular momentum and zero gyroscopic forces. Artificial-gravity generation by centripetal acceleration is also discussed. This section concludes by showing the external specifications of the CESMs and their layout in the centrifuge, followed by discussing the multi-payload module rationale. In tandem, the CCEDS and OMAGS systems can be used to foster gravitational ecosystem research for developing sustainable communities in space and on Earth.

Dorais, Gregory A.↗
DOE OSTI2018

Increasing methane emissions from natural land ecosystems due to sea-level rise

Because methane (CH4) is currently the second most important greenhouse gas, it is important to accurately quantify CH4 emissions from terrestrial ecosystems. Different from many current modelling studies which focus on how CH4 emissions respond to a variety of environmental factors in land ecosystems, we analyzed how methane emitted from lands responded to sea-level increase (SLR) in this study. To do so, a large-scale surface water routing module was incorporated into our existing CH4 model and we designed an efficient simulation protocol to capture small variations in inundation extent due to SLR. Both the annual maximum inundation extent and CH4 emissions showed a steadily growing trend, increasing 1.21 × 105 km2 and 3.13 Tg CH4 /yr globally, respectively, in a 22-year SLR experiment during 1993-2014. Most of new inundation and methane source areas were located near rivers’ deltas and along the downstream reaches of rivers. The increase in inundation extent is primarily influenced by precipitation, channel geomorphic characteristics and topography of riverside area. The growth of CH4 emissions due to the SLR is largely determined by inundation extent but other factors such as temperature and carbon storage also played the important roles. Although the current SLR-induced increases in inundation extent and CH4 emissions only accounted for 1.0% and 1.3% of their global totals, they took 7.0% and 17.3% of the mean annual variability in both, respectively, during the study period. Considering SLR has a long-term but stable increasing trend, future SLR under potential climate change could play a more important role in evaluating dynamic of CH4 emissions.

Lu, Xiaoliang↗
DOE OSTI2019

EcoFAB: Advancing microbiome science through standardized fabricated ecosystems

The vital role microbiomes play in ecosystems and for human health is now apparent. Great progress has been made by using model systems to gain insight into host-microbe interactions, yet lack of standardized reproducible experimental systems and methods greatly limits microbiome science. Recent successes highlight the importance of developing these types of systems to deconstruct mechanisms mediating host-microbe interactions. Standardization of ‘fabricated ecosystems’ would enable detailed mechanistic interrogation and more effective knowledge transfer between researchers – analogous to the significant impact model organisms and cell systems have had in molecular and cell biology. To advance these efforts we advocate for strategies and overarching themes to enable communities of scientists to work together to develop standardized laboratory microbial consortia for studying host-associated microbiomes.

Zengler, Karsten↗
DOE OSTI2019

Drainage enhances modern soil carbon contribution but reduces old soil carbon contribution to ecosystem respiration in tundra ecosystems

Abstract Warming temperatures are likely to accelerate permafrost thaw in the Arctic, potentially leading to the release of old carbon previously stored in deep frozen soil layers. Deeper thaw depths in combination with geomorphological changes due to the loss of ice structures in permafrost, may modify soil water distribution, creating wetter or drier soil conditions. Previous studies revealed higher ecosystem respiration rates under drier conditions, and this study investigated the cause of the increased ecosystem respiration rates using radiocarbon signatures of respired CO 2 from two drying manipulation experiments: one in moist and the other in wet tundra. We demonstrate that higher contributions of CO 2 from shallow soil layers (0–15 cm; modern soil carbon) drive the increased ecosystem respiration rates, while contributions from deeper soil (below 15 cm from surface and down to the permafrost table; old soil carbon) decreased. These changes can be attributed to more aerobic conditions in shallow soil layers, but also the soil temperature increases in shallow layers but decreases in deep layers, due to the altered thermal properties of organic soils. Decreased abundance of aerenchymatous plant species following drainage in wet tundra reduced old carbon release but increased aboveground plant biomass elevated contributions of autotrophic respiration to ecosystem respiration. The results of this study suggest that drier soils following drainage may accelerate decomposition of modern soil carbon in shallow layers but slow down decomposition of old soil carbon in deep layers, which may offset some of the old soil carbon loss from thawing permafrost.

Kwon, Min Jung↗
NASA NTRS2022

The DIARieS Ecosystem – A Software Ecosystem to Simplify Discovery, Implementation, Analysis, Reproducibility, and Sharing of Scientific Results and Environments in Heliophysics

The infrastructure of the Heliophysics discipline has promising components but with several missing gaps, drastically reducing research and development efficiency. Developing an online discovery and analysis software ecosystem will close several of these gaps. The five main focuses on this ecosystem should be Discovery, Implementation, Analysis, Reproducibility, and Sharing of results (DIARieS). In this paper, we give a detailed description of how the proposed software ecosystem should operate, and point out the large range of possible applications to benefit many disparate groups, such as researchers, operational staff, decision-makers, and educators. The infrastructure components and technological capabilities necessary for its completion are either currently available or in development, making such an ecosystem possible for the first time. One main focus of current infrastructure investments must be to adapt and connect these pieces together into a cohesive whole to increase our research and development efficiency.

infrastructure↗
DOE OSTI2018

Elevated [CO2] changes soil organic matter composition and substrate diversity in an arid ecosystem

Little is known about how rising atmospheric [CO2] will impact long-term plant biomass or the dynamics of soil organic matter (SOM) in arid ecosystems. Evans et al. (1) reported higher soil organic carbon (SOC) and total nitrogen (N) concentrations following 10 years exposure to elevated atmospheric [CO2] at the Nevada Desert Free-Air-Carbon dioxide-Enrichment (FACE) Facility (NDFF). In this study, we investigated potential mechanisms that resulted in increased SOC and total N accumulation and SOM stabilization using high resolution mass spectrometry. Samples were collected from soil profiles to 1 m in depth with a 0.2 m increment under the dominant evergreen shrub Larrea tridentata. The differences in the molecular composition and diversity of SOM were more evident in surface soils and declined with depth, and were consistent with higher SOC and total N concentrations under elevated than ambient [CO2]. Our molecular analysis also suggested increased root exudation and/or microbial necromass from stabilization of labile C and N contributed to SOM and N stocks. Increased microbial activity and metabolism under elevated [CO2] compared to ambient treatments suggest that elevated [CO2] altered microbial carbon use patterns, reflecting changes in the quality and quantity of SOC inputs. We found that plant-derived compounds were primary substrates for microbial activity under elevated [CO2] and microbial products were the main constituents of stabilized SOM. Our results suggest that arid ecosystems are a potential large C sink under elevated [CO2], given the extensive coverage of the land surface, and that labile compounds are transformed to stable SOM via microbial processes. Arid systems are limited by water, and thus may have a different C storage potential under changing climates than other ecosystems that are limited by nitrogen or phosphorus.

Tfaily, Malak M.↗