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At least 19 records

EcoFAB 3.0: a sterile system for studying sorghum that replicates previous field and greenhouse observations

Introduction Studying plant-microbe interactions is one of the key elements in understanding the path to sustainable agricultural practices. These interactions play a crucial role in ensuring survival of healthy plants, soil and microbial communities. Many platforms have been developed over the years to isolate these highly complex interactions however, these are designed for small model plants. This creates a need for complementary devices for larger plants, such as sorghum. Methods This work introduces a novel platform, EcoFAB 3.0, which is designed to enable studying bioenergy plants such as sorghum for up to 4 weeks in a controlled sterile environment. Several other advantages of this platform such as dark root chambers and user-friendly assembly are also discussed in this work. Results and discussion EcoFAB 3.0 was found to replicate previous greenhouse and field observations when comparing an engineered sorghum line overproducing 4-hydroxybenzoic acid (4-HBA) and wildtype (variety BTx430). Consistent with greenhouse and field observations, it was found that the engineered line of sorghum grown in EcoFAB 3.0 had a higher 4-HBA content and a lower dry biomass.

Gupta, Kshitiz↗

Observations of Greenhouse Gas Changes across Summer Frontal Boundaries in the Eastern United States

Our knowledge about synoptic-scale variations of atmospheric CO2 produced by interactions between mid-latitude cyclones and regional-scale surface fluxes remains limited by scarcity of observations. We synthesize observations of greenhouse gases (GHG) with respect to frontal passages to understand how GHG distributions change vertically and horizontally during a synoptic event. We use the airborne in-situ measurements of GHGs collected during the first Atmospheric Carbon and Transport–America (ACT) summer field campaign across three regions of the eastern US. We find that frontal structures are consistently and clearly associated with spatially coherent, significant changes in GHG composition. Warm sector CO2 mole fractions (henceforth, [CO2]) are significantly higher than those in the cold sector. The CO2 frontal differences (5-30 ppm) are largest in the atmospheric boundary layer (ABL) with smaller differences (3-5 ppm) in the free troposphere (FT). Bands of elevated CO2 (5-20 ppm enhancement compared to warm-sector mean [CO2]) repeatedly occurred in the ABL adjacent to the frontal boundary. Analyses of 84 vertical profiles reveal higher [CO2] in the FT than in the ABL in the cold-sector, the opposite pattern in the warm-sector. Average ABL-to-FT [CO2] differences are 12 ppm and -6 ppm in the warm and cold sectors, respectively. The same analysis for CH4 shows higher [CH4] in the ABL than in the FT in both warm and cold sectors with at least 30-ppb higher ABL-to-FT [CH4] differences in the warm-sector than in the cold-sector. The observational analyses presented here define new metrics for model evaluation of GHG transport.

Pal, Sandip↗

Greenhouse Gases Observations 1957-2100: Past, Present & Future

Dr. David Charles Keeling’s precise CO 2 observations at the remote Mauna Loa site discerned its global rise that is attributed to emissions from human activities. His Keeling curve is the observational framework to examine anthropogenic climate change that has expanded to other greenhouse gases (GHGs) and monitoring techniques. The accelerating GHG rise and the heat absorbed by them led to concerns about climate change that have exacerbated.

59 BASIC BIOLOGICAL SCIENCES↗

Observations of greenhouse gases as climate indicators

Humans have significantly altered the energy balance of the Earth’s climate system mainly not only by extracting and burning fossil fuels but also by altering the biosphere and using halocarbons. The 3rd US National Climate Assessment pointed to a need for a system of indicators of climate and global change based on long-term data that could be used to support assessments and this led to the development of the National Climate Indicators System (NCIS). Here we identify a representative set of key atmospheric indicators of changes in atmospheric radiative forcing due to greenhouse gases (GHGs), and we evaluate atmospheric composition measurements, including non-CO<:sub>2 GHGs for use as climate change indicators in support of the US National Climate Assessment. GHG abundances and their changes over time can provide valuable information on the success of climate mitigation policies, as well as insights into possible carbon-climate feedback processes that may ultimately affect the success of those policies. To ensure that reliable information for assessing GHG emission changes can be provided on policy-relevant scales, expanded observational efforts are needed. Furthermore, the ability to detect trends resulting from changing emissions requires a commitment to supporting long-term observations. Long-term measurements of greenhouse gases, aerosols, and clouds and related climate indicators used with a dimming/brightening index could provide a foundation for quantifying forcing and its attribution and reducing error in existing indicators that do not account for complicated cloud processes.

54 ENVIRONMENTAL SCIENCES↗

A U.S. Scientific Community Vision for Sustained Earth Observations of Greenhouse Gases to Support Local to Global Action

Managing carbon stocks in the land, ocean, and atmosphere under changing climate requires a globally‐integrated view of carbon cycle processes at local and regional scales. The growing Earth Observation (EO) record is the backbone of this multi‐scale system, providing local information with discrete coverage from surface measurements and regional information at global scale from satellites. Carbon flux information, anchored by inverse estimates from spaceborne Greenhouse Gas (GHG) concentrations, provides an important top‐down view of carbon emissions and sinks, but currently lacks global continuity at assessment and management scales (<100 km). Partial‐column data can help separate signals in the boundary layer from the overlying atmosphere, providing an opportunity to enhance surface sensitivity and bring flux resolution down from that of column‐integrated data (100–500 km). Based on a workshop held in September 2024, the carbon cycle community envisions a carbon observation system leveraging GHG partial columns in the lower and upper troposphere to weave together information across scales from surface and satellite EO data, and integration of top‐down/bottom‐up analyses to link process understanding to global assessment.

Parazoo, Nicholas C. [California Institute of Tech↗

Atmospheric Observation System for Greenhouse Gases (GHG) Instrument Handbook

The Greenhouse Gas (GhG) Measurement system is a combination of two systems in series: (1) the Tower Gas Processing (TGP) System, an instrument rack which pulls, pressurizes, and dries air streams from an atmospheric sampling tower through a series of control and monitoring components, and (2) the Picarro model G2301 cavity ringdown spectrometer (CRDS), which measures CO2, CH4, and H2O vapor; the primary measurements of the GhG system.

54 ENVIRONMENTAL SCIENCES↗

Distinct drivers of recent seasonal precipitation increase over Central Asia: roles of anthropogenic aerosols and greenhouse gases

Observational evidence reveals a pronounced wetting trend over Central Asia in recent decades, with the most substantial increases occurring during winter and summer. Yet the extent to which the drivers of these changes differ seasonally remains unknown. Here, we use single-forcing experiments from the Precipitation Driver and Response Model Intercomparison Project (PDRMIP) to examine the effects of various external forcings on winter and summer precipitation across Central Asia and to explore the physical mechanisms underlying seasonal precipitation changes. We find that greenhouse gas (GHG) forcing mainly increases winter precipitation by enhancing atmospheric moisture content through warming. In contrast, in summer, Asian sulfate aerosols enhance precipitation by modulating the westerly jet, which strengthens atmospheric moisture transport into the region. Asian black carbon exerts an opposing influence that partially offsets the sulfate-induced effect. Further attribution analysis based on CMIP6 simulations reinforces these sensitivity results and shows that GHG forcing is the primary driver of winter precipitation increases whereas anthropogenic aerosols dominate summer trends. Future CMIP6 projections suggest that under moderate- to high-emission scenarios, winter precipitation will continue to rise due to increasing GHG concentrations, while summer precipitation may decline across much of Central Asia as a result of reduced aerosol emissions following Asian clean air policies. These findings highlight a distinct seasonality in the drivers of recent precipitation increase and suggest a plausible divergence in future winter and summer precipitation trends.

54 ENVIRONMENTAL SCIENCES↗

Fingerprints of external forcings on Sahel rainfall: aerosols, greenhouse gases, and model-observation discrepancies

Over the 20th and 21st centuries, both anthropogenic greenhouse gas increases and changes in anthropogenic aerosols have affected rainfall in the Sahel. Using multiple characteristics of Sahel precipitation, we construct a multivariate fingerprint that allows us to distinguish between the model-predicted responses to greenhouse gases and anthropogenic aerosols. Models project the emergence of a detectable signal of aerosol forcing in the middle of the 20th century and a detectable signal of greenhouse gas forcing at the beginning of the 21st. However, the signals of both aerosol and greenhouse gas forcing in observations emerge earlier and are stronger than in the models, far stronger in the case of aerosols. The similarity between the response to aerosol forcing and the leading mode of internal variability makes it difficult to attribute this model-observation discrepancy to errors in the forcing, errors in the forced response, model inability to capture the amplitude of internal variability, or some combination of these. For greenhouse gases, however, the forced response is distinct from internal variability as estimated by models, and the observations are largely commensurate with the model projections.

54 ENVIRONMENTAL SCIENCES↗

Improving E3SM Land Model Photosynthesis Parameterization via Satellite SIF, Machine Learning, and Surrogate Modeling

The parameterization of key photosynthesis parameters is one of the key uncertain sources in modeling ecosystem gross primary productivity (GPP). Solar-induced chlorophyll fluorescence (SIF) offers a good proxy for GPP since it marks the actual process of photosynthesis; while machine learning (ML) provides a robust approach to model the GPP-SIF relationship. Here, we trained the boosted regressing tree (BRT) and the Random Forest ML models with Greenhouse Gases Observing Satellite SIF data and in situ GPP observations from 49 eddy covariance towers. These trained ML GPP-SIF models were fed into the Energy Exascale Earth System Model (E3SM) Land Model (ELM) to generate ELM-simulated global SIF estimates, which were then benchmarked against satellite SIF observations with a surrogate modeling approach. Our results indicated good modeling performance of the ML-based GPP-SIF relationship. The ELM model when fed with the ML GPP-SIF models also can well predict the spatial-temporal variations in SIF. We also found high model accuracy for the surrogate modeling. Model parameter sensitivity analysis suggested that the fraction of leaf nitrogen in RuBisCO (flnr) is the most sensitive parameter to the SIF; other sensitive parameters include the Ball-Berry stomatal conductance slope (mbbopt) and the vcmax entropy (vcmaxse). The posterior uncertainty in simulated GPP was greatly reduced after benchmarking, and the model produced improved spatial patterns of mean GPP relative to FLUXCOM GPP. Our integrated approach provides a new avenue for improving land models and using remote-sensing SIF, which can be further improved in the future with more ground- and satellite-based observations.

54 ENVIRONMENTAL SCIENCES↗

MiniCarb: a passive, occultation-viewing, 6U CubeSat for observations of CO 2 , CH 4 , and H 2 O

In this report we present the final design, environmental testing, and launch history of MiniCarb, a 6U CubeSat developed through a partnership between NASA Goddard Space Flight Center and Lawrence Livermore National Laboratory. MiniCarb’s science payload, developed at Goddard, was an occultation-viewing, passive laser heterodyne radiometer for observing methane, carbon dioxide, and water vapor in Earth’s atmosphere at ~1.6 µm s -1 . MiniCarb’s satellite, developed at Livermore, implemented their CubeSat Next Generation Bus plug-and-play architecture to produce a modular platform that could be tailored to a range of science payloads. Following the launch on 5 December 2019, MiniCarb traveled to the International Space Station and was set into orbit on 1 February 2020 via Northrop Grumman’s Cygnus capsule which deployed MiniCarb with tipoff rotation of about 20° s (significantly higher than the typical rate of 3° s -1 from prior CubeSats), from which the attitude control system was unable to recover resulting in a loss of power. In spite of this early failure, MiniCarb had many successes including rigorous environmental testing, successful deployment of its solar panels, and a successful test of the radio and communication through the Iridium network. This prior work and enticing cost (approximately $\$2$ M for the satellite and $\$$250 K for the payload) makes MiniCarb an ideal candidate for a low-cost and rapid rebuild as a single orbiter or constellation to globally observe key greenhouse gases.

47 OTHER INSTRUMENTATION↗

Advancing Measurements and Understanding of the Rate and Structure of Atmospheric Warming

The rate and geographic pattern of atmospheric warming are key indicators of historical climate change and play a role in modulating future changes in Earth’s climate. The past and future evolution of atmospheric temperature is simulated using global climate models while observational estimates of past warming are derived from satellite microwave measurements. Individual climate models simulate widely varying rates of past and future atmospheric warming and most model simulations exhibit greater tropospheric (lowest ~10 km of atmosphere) temperature change than satellite observations between 1979 and 2020. This project examined intermodel differences in the pattern of atmospheric warming and how these differences influence climate feedbacks that can amplify or damp the rate of global surface warming. A key result is that climate model representation of the current climate can influence climate feedbacks and the simulation of future changes in climate. Another focus of this project was to analyze how models respond to different input datasets, such as volcanic aerosols or sea surface temperature (in atmosphere-only simulations). We find that different prescribed inputs can affect simulated changes in atmospheric temperature, even though “input uncertainty” is often unconsidered in model-observational comparisons. A final focus of this research project was to consider the influence of natural internal climate variability on satellite era changes in climate. Although the Earth is warming substantially due to anthropogenic emissions of greenhouse gases, the observed warming rate can be modulated by natural variations in the Earth’s climate. We find that natural climate variability has slowed the rate of tropical tropospheric warming, which explains model-satellite differences in the rate of tropospheric warming.

58 GEOSCIENCES↗

Development of Laboratory Testbeds Simulating Real-World Greenhouse Gas Emissions

Climate change leads to drastic variations in the environment that can threaten food security. To protect the security and prosperity of the environment, new agricultural practices that mitigate greenhouse gas emissions need to be developed. Agriculture plays a large role in the emissions of greenhouse gases, thus a need for new practices. At present, testing landscape management practices for carbon sequestration and reduction of greenhouse gas emissions are expensive because such tests often require intricate field experiments. Laboratory tests on landscape management practices often fail to simulate and accurately represent the natural systems researchers intend to study. There are methods that can be used to make these laboratory tests more closely replicate natural systems for the improvement of agricultural lands used in biofuel and food production. The goal of this project is to develop a laboratory testbed replicating field conditions that will mimic field greenhouse gas emissions. To achieve this goal, we used soil cores taken from agricultural and marginal lands, then attached fiberglass wicks to improve the drainage system in the soil core to simulate a more natural hydraulic system. The soil cores with the wicks were used to compared to greenhouse gas emissions observed in the field. Our preliminary results suggest that the soil carbon dioxide and nitrous oxide flux from the agricultural land site were comparable to the soil cores equipped with the drainage wicks. The data suggests that laboratory testbeds can be used to mimic field greenhouse gas emissions if parameters, such as soil water content were in a set range. The laboratory testbed produces similar greenhouse gas emissions to the agricultural site when the soil water content was between 15-25%.

54 ENVIRONMENTAL SCIENCES↗

In–context promoter bashing of the Sorghum bicolor gene models functionally annotated as bundle sheath cell preferred expressing phosphoenolpyruvate carboxykinase and alanine aminotransferase

In-context promoter bashing via genome editing is a route to identify and characterize critical regulatory regions that govern expression of genes of interest. The outcomes of in-context promoter bashing can be used to inform editing strategies to modulate the expression of selected gene models in a desired fashion. Here, we employed in-context promoter bashing to characterize the proximal upstream regulatory regions of sorghum genes encoding phosphoenolpyruvate carboxykinase bundle sheath (SbPEPCK.BS, SbiTx430.01G455400) and alanine aminotransferase bundle sheath (SbAlaAT.BS, SbiTx430.02G006600), two proteins involved in the PCK C 4 pathway. Characterized germinal edits within the targeted regions upstream of these two genes ranged in size from 138 up to 1790 bp. A 138 bp within the SbPEPCK.BS upstream region and a 1643 bp element within the SbAlaAT.BS upstream region were determined to be important for maintenance of transcription levels. No change in development or various physiological parameters was observed in characterized lineages carrying promoter edits. However, significant changes in seed reserves and a reduction in 100-seed weight were consistently observed, under both greenhouse and field environments, in plants carrying an edit in the promoter of SbPEPCK.BS gene, which were significantly reduced in transcript accumulation for this gene.

60 APPLIED LIFE SCIENCES↗

Supplementary table, figures and DNA sequences of sorghum gene models SbiRTx430.01G455400 and SbiRTx.02G006600 that feature primers, gRNAs and indels created

In-context promoter bashing via genome editing is a route to identify and characterize critical regulatory regions that govern expression of genes of interest. The outcomes of in-context promoter bashing can be used to inform editing strategies to modulate the expression of selected gene models in a desired fashion. Here we employed in-context promoter bashing to characterize the proximal upstream regulatory regions of sorghum genes encoding phosphoenolpyruvate carboxykinase (Sb.PEPCK.BS, SbiTx430.01G455400) and alanine aminotransferase (SbiTx430.02G006600, SbAlaAT.BS), two proteins involved in the PCK C4 pathway. Characterized germinal edits within the targeted regions upstream of these two genes ranged in size from 138 bp up to 1790 bp. A 138 bp within the Sb.PEPCK.BS upstream region and a 1643 bp element within the Sb.AlaAT.BS upstream region were determined to be important for maintenance of transcription levels. No change in development or various physiological parameters was observed in characterized lineages carrying promoter edits. However, significant changes in seed reserves and a reduction in 100 seed weight were consistently observed, under both greenhouse and field environments, in plants carrying an edit in the promoter of Sb.PEPCK.BS gene were significantly reduced in transcript accumulation for this gene.

Quach, Truyen [Center for Plant Science Innovation↗