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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 19 records

An application of machine learning to the organization of institutional software repositories

Software reuse has become a major goal in the development of space systems, as a recent NASA-wide workshop on the subject made clear. The Data Systems Technology Division of Goddard Space Flight Center has been working on tools and techniques for promoting reuse, in particular in the development of satellite ground support software. One of these tools is the Experiment in Libraries via Incremental Schemata and Cobweb (ElvisC). ElvisC applies machine learning to the problem of organizing a reusable software component library for efficient and reliable retrieval. In this paper we describe the background factors that have motivated this work, present the design of the system, and evaluate the results of its application.

Bailin, Sidney↗

Implementing DSpace at NASA Langley Research Center

This presentation looks at the implementation of the DSpace institutional repository system at the NASA Langley Technical Library. NASA Langley Technical Library implemented DSpace software as a replacement for the Langley Technical Report Server (LTRS). DSpace was also used to develop the Langley Technical Library Digital Repository (LTLDR). LTLDR contains archival copies of core technical reports in the aeronautics area dating back to the NACA era and other specialized collections relevant to the NASA Langley community. Extensive metadata crosswalks were created to facilitate moving data from various systems and formats to DSpace. The Dublin Core metadata screens were also customized. The OpenURL standard and Ex Libris Metalib are being used in this environment to assist our customers with either discovering full-text content or with initiating a request for the item.

Lowe, Greta↗

JPL Author Database

A viewgraph presentation describing the background, goals, implementation, uses and future development of JPL's author database is shown.

preprint servers↗

FAIR-ness Assessment of NASA’s Earth Observation System Data and Information System (EOSDIS)

This presentation addresses the challenge of evaluating a multi-disciplinary institutional network of data repositories in operation since 1994 against the relatively recent criteria that constitute FAIR (Findable, Accessible, Interoperable, Reusable) data. NASA’s Earth Observation System Data and Information System (EOSDIS), with its 12 discipline-based Distributed Active Archive Centers (DAACs), preceded the definition and popularization of FAIR by over two decades. An assessment is very useful to describe how well the FAIR principles are met and to identify any improvements needed. In 2020, A “self-assessment” of EOSDIS and DAACs was performed by the ESDIS Project staff and the DAACs from the points of view of human actionability and machine actionability. More recently, a draft of a Science Mission Directorate (SMP) Program Directive (SPD-41a) has been released by NASA Headquarters for comment, where it is recommended that all SMD-funded data should follow the FAIR principles. This presentation is timely to initiate community discussion within the Information Quality Cluster (IQC) of the Earth Science Information Partners (ESIP) and help strategize and develop implementation guidelines for EOSDIS and DAACs to conform to FAIR principles.

Remote sensing↗

A Graphical User Interface for the Deep Underground Neutrino Experiment Robotic Test Stand

In preparation for DUNE, Fermilab along with six other institutions are testing cold electronics for quality control before components placed in the far detector. We test them by using a robotic arm that places these chips into sockets on a computer board that will test their functionality. Up until now, the chips have been tested using a command line script that drives a state machine to conduct tests step-by-step. In order to lower the skill barrier to conduct tests and to speed up the quality control process, I was tasked to create a graphical user interface that would allow users to use buttons, text boxes, and drop-down menus to input information and tell the testing state machine how to operate. I had to learn about the Python package Tkinter to start the process of widget placement. I further developed a pause feature unused in the previous command line script that would allow the user to shut down testing gracefully, bring the robotic arm to go back to ground state, and go forward or backward a step in the testing process. After completing the basic functionality of the GUI, I started testing production chips with the GUI to debug. Some issues were found, which required me to further develop parts of the inherited state machine code. The code for the GUI has now been pushed into the copy the DUNE/FD_CE git repository and will soon be merged with the official DUNE/FD_CE repository so that the other institutions testing DUNE cold electronics can use and expand upon it.

Gutierrez Villanueva, Jaziel [Fermilab]↗

Genomes OnLine Database (GOLD) v.10: new features and updates

The Genomes OnLine Database (GOLD; https://gold.jgi.doe.gov/) at the Department of Energy Joint Genome Institute is a comprehensive online metadata repository designed to catalog and manage information related to (meta)genomic sequence projects. GOLD provides a centralized platform where researchers can access a wide array of metadata from its four organization levels namely Study, Organism/Biosample, Sequencing Project and Analysis Project. GOLD continues to serve as a valuable resource and has seen significant growth and expansion since its inception in 1997. With its expanded role as a collaborative platform, it not only actively imports data from other primary repositories like National Center for Biotechnology Information but also supports contributions from researchers worldwide. This collaborative approach has enriched the database with diverse datasets, creating a more integrated resource to enhance scientific insights. As genomic research becomes increasingly integral to various scientific disciplines, more researchers and institutions are turning to GOLD for their metadata needs. To meet this growing demand, GOLD has expanded by adding diverse metadata fields, intuitive features, advanced search capabilities and enhanced data visualization tools, making it easier for users to find and interpret relevant information. This manuscript provides an update and highlights the new features introduced over the last 2 years.

59 BASIC BIOLOGICAL SCIENCES↗

Fifth NASA Goddard Conference on Mass Storage Systems and Technologies.

This document contains copies of those technical papers received in time for publication prior to the Fifth Goddard Conference on Mass Storage Systems and Technologies. As one of an ongoing series, this conference continues to serve as a unique medium for the exchange of information on topics relating to the ingestion and management of substantial amounts of data and the attendant problems involved. This year's discussion topics include storage architecture, database management, data distribution, file system performance and modeling, and optical recording technology. There will also be a paper on Application Programming Interfaces (API) for a Physical Volume Repository (PVR) defined in Version 5 of the Institute of Electrical and Electronics Engineers (IEEE) Reference Model (RM). In addition, there are papers on specific archives and storage products.

Kobler, Benjamin↗

Fifth NASA Goddard Conference on Mass Storage Systems and Technologies

This document contains copies of those technical papers received in time for publication prior to the Fifth Goddard Conference on Mass Storage Systems and Technologies held September 17 - 19, 1996, at the University of Maryland, University Conference Center in College Park, Maryland. As one of an ongoing series, this conference continues to serve as a unique medium for the exchange of information on topics relating to the ingestion and management of substantial amounts of data and the attendant problems involved. This year's discussion topics include storage architecture, database management, data distribution, file system performance and modeling, and optical recording technology. There will also be a paper on Application Programming Interfaces (API) for a Physical Volume Repository (PVR) defined in Version 5 of the Institute of Electrical and Electronics Engineers (IEEE) Reference Model (RM). In addition, there are papers on specific archives and storage products.

Kobler, Benjamin↗

XML: James Webb Space Telescope Database Issues, Lessons, and Status

This paper will present the current concept using extensible Markup Language (XML) as the underlying structure for the James Webb Space Telescope (JWST) database. The purpose of using XML is to provide a JWST database, independent of any portion of the ground system, yet still compatible with the various systems using a variety of different structures. The testing of the JWST Flight Software (FSW) started in 2002, yet the launch is scheduled for 2011 with a planned 5-year mission and a 5-year follow on option. The initial database and ground system elements, including the commands, telemetry, and ground system tools will be used for 19 years, plus post mission activities. During the Integration and Test (I&T) phases of the JWST development, 24 distinct laboratories, each geographically dispersed, will have local database tools with an XML database. Each of these laboratories database tools will be used for the exporting and importing of data both locally and to a central database system, inputting data to the database certification process, and providing various reports. A centralized certified database repository will be maintained by the Space Telescope Science Institute (STScI), in Baltimore, Maryland, USA. One of the challenges for the database is to be flexible enough to allow for the upgrade, addition or changing of individual items without effecting the entire ground system. Also, using XML should allow for the altering of the import and export formats needed by the various elements, tracking the verification/validation of each database item, allow many organizations to provide database inputs, and the merging of the many existing database processes into one central database structure throughout the JWST program. Many National Aeronautics and Space Administration (NASA) projects have attempted to take advantage of open source and commercial technology. Often this causes a greater reliance on the use of Commercial-Off-The-Shelf (COTS), which is often limiting. In our review of the database requirements and the COTS software available, only very expensive COTS software will meet 90% of requirements. Even with the high projected initial cost of COTS, the development and support for custom code over the 19-year mission period was forecasted to be higher than the total licensing costs. A group did look at reusing existing database tools and formats. If the JWST database was already in a mature state, the reuse made sense, but with the database still needing to handing the addition of different types of command and telemetry structures, defining new spacecraft systems, accept input and export to systems which has not been defined yet, XML provided the flexibility desired. It remains to be determined whether the XML database will reduce the over all cost for the JWST mission.

Detter, Ryan↗

Aviation System Analysis Capability Quick Response System Report Server User's Guide

This report is a user's guide for the Aviation System Analysis Capability Quick Response System (ASAC QRS) Report Server. The ASAC QRS is an automated online capability to access selected ASAC models and data repositories. It supports analysis by the aviation community. This system was designed by the Logistics Management Institute for the NASA Ames Research Center. The ASAC QRS Report Server allows users to obtain information stored in the ASAC Data Repositories.

DATA STORAGE SYSTEMS↗

Past Approaches for Spent Nuclear Fuel, Transuranic, and High-Level Waste Disposal in the United States—Part 2: Siting Process, Staged Development, and Public Preferences

This report presents pertinent aspects of the ~50-year United States experience in siting a mined geologic disposal repository for spent nuclear fuel (SNF), transuranic (TRU) waste, and high-level radioactive waste (HLW) as related to site selection and the staged process for site investigations as specified in the Nuclear Waste Policy Act of 1982 and generic and site-specific regulations of the US Department of Energy (DOE), US Environmental Protection Agency (EPA), and US Nuclear Regulatory Commission (NRC). The roles of the Environmental Impact Statement and guidance in international consensus standards by the International Atomic Energy Agency are also mentioned. The focus is on siting and developing the Waste Isolation Pilot Plant, an operating repository for TRU waste from atomic energy defense activities, and the proposed Yucca Mountain repository for commercial SNF and HLW. In the social dimension, the role of institutional stakeholders is described. Past national surveys related to waste management options for storage and disposal provide insight on public preferences of other stakeholders. The descriptions are intended to help other countries more fully understand the stages adopted for siting and developing repositories in the United States.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Strategies for community-sourced biocuration in bioinformatics: a case study on MIBiG 4.0

Biocuration is essential to transform molecular sequence data into standardized, machine-readable resources. Such curated datasets enable comparative analysis, predictive modeling, and data integration across bioinformatics platforms. While professional biocuration is resource-intensive and usually limited to institutional settings, community-driven approaches can mobilize large-scale annotation of specialized datasets and are more resilient to disruptions in scientific funding. Here, we present a model for community-powered curation applied to the Minimum Information about a Biosynthetic Gene Cluster (MIBiG) repository. Through a framework of workflows for metadata capture, annotation validation, and contributor coordination, the MIBiG 4.0 initiative recruited 267 scientists across 178 institutions from 33 countries, volunteering an estimated 4000 h of work. These efforts expanded the MIBiG repository by 22% and enhanced its usability in downstream molecular data analyses in comparative genomic analyses, natural product discovery, and machine learning applications. We provide strategies and actionable lessons for adopting this model, supporting the sustainability of curated bioinformatics resources central to nucleic acid research and related fields.

biocuration↗

Storage of Physical Sample Metadata in the Astrobiology Habitable Environments Database (AHED)

The National Aeronautics and Space Administration has begun an effort to store, curate, and publish information about physical samples collected and analyzed in conjunction with NASA-funded astrobiology research. Astrobiology is a multidisciplinary area of scientific research being conducted by collaborating teams of biologists, chemists, geologists, atmospheric scientists, oceanographers, astrophysicists, astronomers, and other specialists. Astrobiology studies the origin, evolution, and distribution of life in the Universe. NASA uses the results of astrobiology research to focus its future missions on targets of opportunity for the discovery of life off Earth. Astrobiology researchers conduct both field-based and laboratory-based research, during which physical samples are collected, processed, and catalogued. The cataloguing practices employed by different teams of astrobiologists vary widely, and there are no specific standards available to guide the collection and recording of astrobiology sample data. The disparity in data collection approaches and the lack of a centralized sample repository makes it difficult for astrobiology teams to share data and benefit from resultant synergies.To facilitate data sharing within the astrobiology community, NASA is developing a prototype database the Astrobiology Habitable Environments Database (AHED) and an associated set of data collection templates. The database will store information about samples, along with associated measurements and analyses, including information about biological cultures enriched or isolated from samples, and the results of analyses performed on the samples (e.g., via spectrography, microscopy, etc.). In addition, the system will store contextual information about field sites where samples were collected, the instruments or equipment used for analysis, and people and institutions involved in their collection. AHED is being implemented on top of Open Data Repository's Data Publisher [1], an open source software platform for the publication of scientific datasets. The data collection templates under development represent an initial attempt to propose a set of metadata for capture and storage within AHED. The design of these templates is being conducted by a consolidated group of astrobiologists from active research teams at NASA Ames Research Center, assisted by data science and software engineering specialists. These initial templates must be vetted with the broader astrobiology community through a defined process to ensure that they meet community needs. Each template captures a different type of data collection record. For each template, we are developing a list of fields to be captured, including a set of required entry fields, a set of recommended but optional fields, and a set of discretionary fields. A datatype selected from a variety of text and numeric types is specified for each field. Included is a 'choice' type that restricts user input to an enumerated list of values. Many of the fields and field values capture information of particular interest to the astrobiology community, and are intended to facilitate search and retrieval of relevant data across multiple datasets.

Keller, Rich↗

Project 2.8: Biological Specimen Repository for the Mayak Project

Curation of the existing specimens, including Standard Operating Procedures: The Southern Urals Biophysics Institute (SUBI) will continue to manage the day-to-day operations of the biorepository, but will have to assume the financial costs of maintaining and purchasing equipment such as freezers; Standard Operating Procedures are already in place for all aspects of the operations, and the Georgetown University team will be available on a voluntary and ad hoc basis to answer any technical questions in the future. Acquisition and tracking of new specimens: SUBI will decide on the collection of new tissues and blood samples in the future, and on what scale, depending on available resources and research needs. The Georgetown University team is willing to provide advice on a voluntary and ad hoc basis. Procedures for receiving and approving specimen requests from users: SUBI can take over this function; Chris Loffredo and other qualified research scientists at Georgetown University would be willing to serve as Tissue Review Committee members on a voluntary and ad hoc basis. Biospecimens remaining at Georgetown University: pursuant to the original terms of the Biospecimen Transfer Agreement between SUBI and Georgetown University, all unused portions of specimens (FFPE blocks, slides, and frozen tissues) will be returned to SUBI at the conclusion of the approved scientific research for which they were transferred. It was anticipated that the return shipment of biospecimens would occur in the fall of 2023. However, at this time, due to international developments, there are no shipping companies who can provide such deliveries to Russia. For now, the biospecimens can remain at Georgetown University where they are stored at the Genomics and Epigenomics Shared Resource. There have not been any storage costs to date, but this could change in the future.

59 BASIC BIOLOGICAL SCIENCES↗

Prediction of regional infrasound produced by supersonic sources using a ray-based Mach cone source

The geometry of the Mach cone produced by a supersonic source is analyzed and mapped into initial conditions used in acoustic ray tracing. The resulting source model is combined with spherical geometry ray tracing methods to enable propagation simulations for infrasonic signals produced by bolides, space debris, rockets, aircraft, and other fast-than-sound sources out to typical infrasonic observation distances of hundreds or thousands of kilometers. Idealized linear and parabolic trajectories typical of bolides and rockets, respectively, are used to demonstrate the calculation of regional infrasonic signals produced by such sources and characteristics of the radiated infrasonic waves are found to vary strongly with the geometry of the trajectory and atmospheric structure. Predicted regional infrasonic signals are compared with those observed from a November 2020 bolide that passed over Scandinavia using a combination of institutionally maintained infrasound stations and “citizen scientist” data from the Raspberry Shake data repository.

47 OTHER INSTRUMENTATION↗

Prediction of regional infrasound produced by supersonic sources using a ray-based Mach cone source

The geometry of the Mach cone produced by a supersonic source is analyzed and mapped into initial conditions used in acoustic ray tracing. The resulting source model is combined with spherical geometry ray tracing methods to enable propagation simulations for infrasonic signals produced by bolides, space debris, rockets, aircraft, and other fast-than-sound sources out to typical infrasonic observation distances of hundreds or thousands of kilometers. Idealized linear and parabolic trajectories typical of bolides and rockets, respectively, are used to demonstrate the calculation of regional infrasonic signals produced by such sources and characteristics of the radiated infrasonic waves are found to vary strongly with the geometry of the trajectory and atmospheric structure. Predicted regional infrasonic signals are compared with those observed from a November 2020 bolide that passed over Scandinavia using a combination of institutionally maintained infrasound stations and “citizen scientist” data from the Raspberry Shake data repository.

42 ENGINEERING↗

Scaling HPC Education

Throughout the cyberinfrastructure community there are a large range of resources available to train faculty and young scholars about successful utilization of computational resources for research. The challenge that the community faces is that training materials abound, but they can be difficult to find, and often have little information about the quality or relevance of offerings. Building on existing software technology, we propose to build a way for the community to better share and find training and education materials through a federated training repository. In this scenario, organizations and authors retain physical and legal ownership of their materials by sharing only catalog information, organizations can refine local portals to use the best and most appropriate materials from both local and remote sources, and learners can take advantage of materials that are reviewed and described more clearly. In this paper, we introduce the HPC ED pilot project, a federated training repository that is designed to allow resource providers, campus portals, schools, and other institutions to both incorporate training from multiple sources into their own familiar interfaces and to publish their local training materials.

community engagement↗