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DOE OSTI2020

Fine Root and Soil Organic Carbon Depth Distributions are Inversely Related Across Fertility and Rainfall Gradients in Lowland Tropical Forests

Humid tropical forests contain some of the largest soil organic carbon (SOC) stocks on Earth. Much of this SOC is in subsoil, yet variation in the distribution of SOC through the soil profile remains poorly characterized across tropical forests. We used a correlative approach to quantify relationships among depth distributions of SOC, fine root biomass, nutrients and texture to 1 m depths across 43 lowland tropical forests in Panama. The sites span rainfall and soil fertility gradients, and these are largely uncorrelated for these sites. We used fitted b parameters to characterize depth distributions, where b is a numerical index based on an asymptotic relationship, such that larger b values indicate greater concentrations of root biomass or SOC at depth in the profile. Root b values ranged from 0.82 to 0.95 and were best predicted by soil pH and extractable potassium (K) stocks. For example, the three most acidic (pH < 4) and Kpoor (< 20 g K m -2 ) soils contained 76 ± 5% of fine root biomass from 0 to 10 cm depth, while the three least acidic (pH > 6.0) and most K-rich (> 50 g K m -2 ) soils contained only 41 ± 9% of fine root biomass at this depth. Root b and SOC b values were inversely related, such that a large fine root biomass in surface soils corresponded to large SOC stocks in subsoils (50–100 cm). SOC b values were best predicted by soil pH and base cation stocks, with the three most base-poor soils containing 34 ± 8% of SOC from 50 to 100 cm depth, and the three most base-rich soils containing just 9 ± 2% of SOC at this depth. Nutrient depth distributions were not related to Root b or SOC b values. Here, these data show that large surface root biomass stocks are associated with large subsoil C stocks in strongly weathered tropical soils. Further studies are required to evaluate why this occurs, and whether changes in surface root biomass, as may occur with global change, could in turn influence SOC storage in tropical forest subsoils.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2021

Carbon content of soil fractions varies with season, rainfall, and soil fertility across a lowland tropical moist forest gradient

Tropical forests contain some of the largest soil carbon (C) stocks on Earth, making them broadly relevant to terrestrial-climate feedbacks, yet our understanding of how their soil organic C (SOC) fractions vary over space and time is limited. We studied effects of season, fertility, and mean annual precipitation (MAP) on the C contents of soil fractions across 14 lowland forests in Panama. We measured free-debris, occluded-debris, and mineral-associated SOC fractions, as well as soluble C associated with each fraction. We hypothesized that mineral-associated SOC would be greatest in infertile, strongly weathered soils with large reactive mineral contents. We also hypothesized that the debris SOC fractions would accumulate during the dry season, reflecting seasonal increases in litterfall. To address this, we compared soil fractions in wet and dry seasons from fertile and infertile soils across a range of 1809 – 2864 mm MAP. The C content (mg C / g soil) of all soil fractions varied with fertility and MAP: specifically, free-debris SOC was greatest in wet, high-fertility soils, and occluded-debris SOC was greater in high-fertility than low-fertility soils. The mineral-associated SOC fraction, which contained the majority of bulk soil C, showed increasing C content with greater MAP in infertile sites, presumably driving similar spatial patterns in the bulk soil. Only the free-debris SOC fraction showed strong seasonal variation, increasing in mass during the dry season. Nitrogen behaved similarly to C. In summary, soil C contents increased with MAP in infertile sites but not fertile sites, driven by the mineral-associated SOC fraction. The dry season had greater free-debris SOC, but this seasonal trend was not apparent in bulk soil C, likely because of the small size of the free-debris SOC fraction. Furthermore, changes in the quantity and seasonality of precipitation, which are projected for tropical forests, might shift spatial and temporal patterns of soil C storage, which would in turn influence forest-climate feedbacks for this C-rich biome.

54 ENVIRONMENTAL SCIENCES↗

NASA NTRS2004

Validating Ancient Age of the Buried Floor of the Northern Lowlands, Mars

Hesperian and Amazonian plains units cover the northern lowlands but little is known about what this surface covers. Models for the creation of the lowlands and the dichotomy boundary implement mechanisms which vary from internal processes, such as plate tectonics or first-order mantle convection, to external processes, such as a single large impact or multiple impacts. Different models require different time scales for low-land formation; determining the age of the buried low-land surface would help constrain the formation models. The Mars Orbiting Laser Altimeter (MOLA) has yielded a high-precision, topographic gridded data set that reveals the presence of Quasi-Circular Depressions (QCDs) in both the southern highlands and the northern lowlands. Most of these roughly circular depressions have no corresponding visible structural feature on the surface. It is proposed that these QCDs are the surface representation of buried impact craters. Based on this assumption, cumulative number vs. diameter curves were constructed, which placed the age of the buried surface of the northern lowlands in the Early or pre-Noachian. A Noachian basement is supported by the remnants of large craters and multi-ring basins discovered in earlier research, but the QCDs provide the first evidence of this for the entire lowland. Constraining the age of the basement floor to the earliest Noachian, however, would require that the process that formed the northern lowlands either occurred in the early Noachian or involves removal of material from the bottom of the crust without destroying the previously formed craters to achieve the modeled crustal thinning. But can we establish that the QCDs do in fact represent buried impact craters, and thus validate an Early Noachian age for the buried lowland floor?

Buczkowski, D. L.↗

NASA NTRS2005

Relative Ages of the Highlands, Lowlands, and Transition Zone Along a Portion of the Mars Crustal Dichotomy from Densities of Visible and Buried Impact Craters

Understanding the fundamental age relationships of the different parts of the Mars Crustal Dichotomy is essential to fully understanding the events that shaped the early history and formation of the surface of Mars. A dominant question is what are the true relative ages of the Northern Lowlands and the Southern Highlands? Using MOLA data from the Mars Global Surveyor and Viking visual images, a dataset of both buried and visible crater diameters was created over a nine million sq km study area of a section of the dichotomy boundary stretching from Arabia Terra to Utopia Planitia. Cumulative frequency plots on a log-log scale were used to determine the relative ages for the Highlands, the Lowlands, and the Transition Zone, separately for the visible, the buried and the combined total (visible+ buried) populations. We find the overall Highland crater population in this area is slightly older than the Lowlands, consistent with previous global studies, but the Lowlands and Transition Zone are also very old and formed at roughly the same time. It appears that the formation of the Lowlands in this region formed contemporaneously with a large-scale resurfacing event in the Highlands, perhaps caused by the process responsible for the Lowland formation.

DeSoto, G. E.↗

NASA NTRS2018

The Impacts of Recent Drought on Fire, Forest Loss, and Regional Smoke Emissions in Lowland Bolivia

In the southern Amazon relationships have been established among drought, human activities that cause forest loss, fire, and smoke emissions. We explore the impacts of recent drought on fire, forest loss, and atmospheric visibility in lowland Bolivia. To assess human influence on fire, we consider climate, fire, and vegetation dynamics in an area largely excluded from human activities since 1979, Noel Kempff Mercado National Park (NK) in northeastern Bolivia. We use data from five sources: the Moderate Resolution Imaging Spectroradiometer Collection 6 active fire product (2001-2015) (MODIS C6), Global Fire Weather Database (GFWED) data (1982-2015), MODIS land cover data (2001-2010), MODIS forest loss data (2000-2012), and the regional extinction coefficient for the southwestern Amazon (i.e., B(sub ext)), which is derived from horizontal visibility data from surface stations at the World Meteorological Organization (WMO) level (1973-2015). The B(sub ext) is affected by smoke and acts as a proxy for visibility and regional fire emissions. In lowland Bolivia from 2001 to 2015, interannual Drought Code (DC) variability was linked to fire activity, while from 1982 to 2015, interannual DC variability was linked to B(sub ext). From 2001 to 2015, the B(sub ext) and MODIS C6 active fire data for lowland Bolivia captured fire seasonality, and covaried between low- and high-fire years. Consistent with previous studies, our results suggest B(sub ext)t can be used as a longer-term proxy of regional fire emissions in southwestern Amazonia. Overall, our study found drought conditions were the dominant control on interannual fire variability in lowland Bolivia, and fires within NK were limited to the Cerrado and seasonally inundated wetland biomes. Our results suggest lowland Bolivian tropical forests were susceptible to human activities that may have amplified fire during drought. Human activities and drought need to be considered in future projections of southern Amazonian fire, in regard to carbon emissions and global climate.

Forest Loss↗

DOE OSTI2023

Genomic prediction of switchgrass winter survivorship across diverse lowland populations

Abstract In the North-Central United States, lowland ecotype switchgrass can increase yield by up to 50% compared with locally adapted but early flowering cultivars. However, lowland ecotypes are not winter tolerant. The mechanism for winter damage is unknown but previously has been associated with late flowering time. This study investigated heading date (measured for two years) and winter survivorship (measured for three years) in a multi-generation population generated from two winter-hardy lowland individuals and diverse southern lowland populations. Sequencing data (311,776 markers) from 1,306 individuals were used to evaluate genome-wide trait prediction through cross-validation and progeny prediction (n = 52). Genetic variance for heading date and winter survivorship was additive with high narrow-sense heritability (0.64 and 0.71, respectively) and reliability (0.68 and 0.76, respectively). The initial negative correlation between winter survivorship and heading date degraded across generations (F1 r = −0.43, pseudo-F2 r = −0.28, pseudo-F2 progeny r = −0.15). Within-family predictive ability was moderately high for heading date and winter survivorship (0.53 and 0.52, respectively). A multi-trait model did not improve predictive ability for either trait. Progeny predictive ability was 0.71 for winter survivorship and 0.53 for heading date. These results suggest that lowland ecotype populations can obtain sufficient survival rates in the northern United States with two or three cycles of effective selection. Despite accurate genomic prediction, naturally occurring winter mortality successfully isolated winter tolerant genotypes and appears to be an efficient method to develop high-yielding, cold-tolerant switchgrass cultivars.

60 APPLIED LIFE SCIENCES↗

NASA NTRS1994

Role of the Hudson Bay lowland as a source of atmospheric methane

Based on point measurements of methane flux from wetlands in the boreal and subarctic regions, northern wetlands are a major source of atmospheric methane. However, measurements have not been carried out in large continuous peatlands such as the Hudson Bay Lowland (HBL) (320,000 sq km) and the Western Siberian lowland (540,000 sq km), which together account for over 30% of the wetlands north of 40 deg N. To determine the role the Hudson Bay Lowland as a source of atmospheric methane, fluxes were measured by enclosures throughout the 1990 snow-free period in all the major wetland types and also by an aircraft in July. Two detailed survey areas were investigated: one (approximately 900 sq km) was in the high subarctic region of the northern lowland and the second area (approximately 4,800 sq km) straddled the Low Subarctic and High Boreal regions of the southern lowland. The fluxes were integrated over the study period to produce annual methane emissions for each wetland type. The fluxes were then weighted by the area of 16 different habitats for the southern area and 5 habitats for the northern area, as determined from Landsat thematic mapper to yield an annual habitat-weighted emission. On a per unit area basis, 1.31 +/- 0.11 and 2.79 +/- 0.39 g CH4 m(exp -2)/yr were emitted from the southern and northern survey areas, respectively. The extrapolated enclosure estimates for a 3-week period in July were compared to within 10% of the flux derived by airborne eddy correlation measurements made during the same period. The aircraft mean flux of 10 +/- 9 mg CH4 m(exp -2)/d was not statistically different from the extrapolated mean flux of 20 +/- 16 mg CH4 m(exp -2)/d. The annual habitat-weighted emission for the entire HBL using six wetland classes is estimated as 0.538 +/- 0.187 Tg CH4/yr (range of extreme cases is 0.057 to 2.112 Tg CH4/yr). This value is much lower than expected, based on previous emission estimates from northern wetlands.

Roulet, Nigel T.↗

NASA NTRS1978

Mars, highlands - lowlands: Viking contributions to Mariner relative age studies

Stratigraphic relations between lowland plains and highlands, two major types of Martian geologic-terrain units, were not directly distinguishable on Mariner-9 images. Morphologic characteristics and crater densities suggested that the lava plains beneath their eolian cover were younger than adjacent highland rocks, which form a plateau bounded in many places by highly dissected escarpments. Alternatively, the lowland plains could be the older unit and represent a broad erosional surface exhumed by southward retreat of the highlands along their frontal scarp. Viking photos across five areas of the highland-lowland boundary, however, tend to confirm the younger age of the plains-forming lava flows. A time interval of several hundred million years probably occurred between the retreat of the highland scarp and its latest embayment by lava extrusions in the lowlands.

Scott, D. H.↗

DOE OSTI2020

Nitrogen fixation and resorption efficiency differences among twelve upland and lowland switchgrass cultivars

In nitrogen (N)-limited terrestrial ecosystems, plants employ various strategies to acquire and conserve N, including translocation of N in perennial tissues and stimulation of N fixation in roots and soils. Switchgrass (Panicum virgatum L.) is a genotypically and phenotypically diverse perennial grass with two distinct ecotypes (lowland and upland) and numerous genotypes. It grows well in low-N soils, likely because of its ability to translocate N and to associate with N-fixing microbes, but little is known about variation in these traits among cultivars or even ecotypes. We measured N translocation, N fixation potential in roots and soils, soil net N mineralization, soil net nitrification, and biomass yields in 12 switchgrass cultivars grown in a replicated block experiment in southwestern Michigan, USA. Lowland cultivars had higher yields, rates of N translocation, soil net N mineralization, and N fixation potentials on washed, non-sterile roots, while upland cultivars exhibited higher N fixation potentials in root-free soil. N resorption efficiencies averaged 53±5 [SE] % for lowland versus 29±3% for upland cultivars. Additionally, there were significant among-cultivar differences for all response variables except mineralization and nitrification, with differences likely explained by cultivar-specific physiologies and microbial communities. Here, the ideal cultivar for biofuels is one that can maintain high yields with minimal fertilizer addition and there appear to be several cultivars that meet these criteria. In addition, results suggest substantial N cycle differences among cultivars that might be exploited by breeders to create new or improved high-yielding, N-conserving switchgrass lines.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2021

Quantitative trait locus mapping combined with variant and transcriptome analyses identifies a cluster of gene candidates underlying the variation in leaf wax between upland and lowland switchgrass ecotypes

Switchgrass (Panicum virgatum L.) is a promising warm-season candidate energy crop. It occurs in two ecotypes, upland and lowland, which vary in a number of phenotypic traits, including leaf glaucousness. To initiate trait mapping, two F 2 mapping populations were developed by crossing two different F 1 sibs derived from a cross between the tetraploid lowland genotype AP13 and the tetraploid upland genotype VS16, and high-density linkage maps were generated. Quantitative trait locus (QTL) analyses of visually scored leaf glaucousness and of hydrophobicity of the abaxial leaf surface measured using a drop shape analyzer identified highly significant colocalizing QTL on chromosome 7K (Chr07K). Using a multipronged approach, we identified a cluster of genes including Pavir.7KG077009, which encodes a Type III polyketide synthase-like protein, and Pavir.7KG013754 and Pavir.7KG030500, two highly similar genes that encode putative acyl-acyl carrier protein (ACP) thioesterases, as strong candidates underlying the QTL. The lack of homoeologs for any of the three genes on Chr07N, the relatively low level of identity with other switchgrass KCS proteins and thioesterases, as well as the organization of the surrounding region suggest that Pavir.7KG077009 and Pavir.7KG013754/Pavir.7KG030500 were duplicated into a fast-evolving chromosome region, which led to their neofunctionalization. Furthermore, sequence analyses showed all three genes to be absent in the two upland compared to the two lowland accessions analyzed. This study provides an example of and practical guide for trait mapping and candidate gene identification in a complex genetic system by combining QTL mapping, transcriptomics and variant analysis.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2024

Soil Carbon Dynamics Following Land Use Changes and Conversion to Oil Palm Plantations in Tropical Lowlands Inferred From Radiocarbon

We measured the 14C and 13C isotopic values of soil organic carbon in mineral soil from lowland tropical forests to provide insight into how quickly carbon is turning over in the soil following conversion of primary forests to oil palm plantations. In addition to areas converted to oil palm plantations in Peru, Indonesia, and Cameroon, we examine pastures and secondary forests in Peru as a comparison to the carbon cycling processes operating in the oil palm plantations.This dataset includes radiocarbon (Δ14C) and stable carbon (δ13C) isotopes of soil organic carbon in mineral soils from natural lowland forests and oil palm plantations in Peru, Indonesia, and Cameroon. We additionally examine plots of secondary forests following agricultural use and pastures on cleared natural forest in Peru. In addition to isotopic data, this dataset includes soil carbon and nitrogen concentrations and stock, soil texture (percent sand, silt, and clay), pH, ECEC (effective cation exchange capacity), base saturation, and bulk density. Soils were sampled in 4 depth increments to 100 cm depth.This dataset supports the publication Finstad et al., 2020. Finstad, K., van Straaten, O., Veldkamp, E., & McFarlane, K. (2020). Soil carbon dynamics following land use changes and conversion to oil palm plantations in tropical lowlands inferred from radiocarbon. Global Biogeochemical Cycles, 34, e2019GB006461. https://doi.org/10.1029/2019GB006461

54 ENVIRONMENTAL SCIENCES↗

NASA NTRS1983

Seasat synthetic aperture radar /SAR/ response to lowland vegetation types in eastern Maryland and Virginia

Examination of Seasat SAR images of eastern Maryland and Virginia reveals botanical distinctions between vegetated lowland areas and adjacent upland areas. Radar returns from the lowland areas can be either brighter or darker than returns from the upland forests. Scattering models and scatterometer measurements predict an increase of 6 dB in backscatter from vegetation over standing water. This agrees with the 30-digital number (DN) increase observed in the digital Seasat data. The brightest areas in the Chickahominy, Virginia, drainage, containing P. virginica about 0.4 m high, contrast with the brightest areas in the Blackwater, Maryland, marshes, which contain mature loblolly pine in standing water. The darkest vegetated area in the Chickahominy drainage contains a forest of Nyssa aquatica (water tupelo) about 18 m high, while the darkest vegetated area in the Blackwater marshes contains the marsh plant Spartina alterniflora, 0.3 m high. The density, morphology, and relative geometry of the lowland vegetation with respect to standing water can all affect the strength of the return L band signal.

Krohn, M. D.↗

NASA NTRS1994

Exchange of nitrous oxide within the Hudson Bay lowland

The source strength of atmospheric trace gases from natural ecosystems must be quantified in order to assess the effect of such inputs on the background tropospheric chemistry. A static chamber technique and a gas exchange technique were used to determine the emissions of nitrous oxide from five sites within the Hudson Bay Lowland, as part of the Northern Wetland Study. Two mechanisms, one diffusive and the other episodic, were found likely to be responsible for the emissions of nitrous oxide. The annual diffusive flux ranged from -3.8 mg(N2O)/sq m in a treed bog to 7.9 mg(N2O)/sq m in an open fen. The addition of the episodic flux, increased this range to -2.1 mg(N2O)/sq m and 18.5 mg(N2O)/sq m respectively. These episodic emissions occurred in from 2.5% to 16.7% of the samples during the late summer peak emission period. Since the gas exchange rate could not detect the episodic emissions, it was found to be a poor method for water emission rate determination within the wetland. LANDSAT-Thermatic Mapper (TM) imagery was used to scale the emissions, from the chamber level to an integrated average over the entire Hudson Bay Lowland. The total emission rate of N2O from the Hudson Bay Lowland, was determined to be 1.2 Gg(N2O)/year, of which 80% was attributed to episodic emissions.

Schiller, C. L.↗

NASA NTRS2005

Regional Studies of Highland-Lowland Age Differences Across the Mars Crustal Dichotomy Boundary

Regional differences in crater retention ages (CRAs) across the Mars dichotomy boundary are compared to the global highland-lowland age difference previously determined from visible and buried impact basins based on MOLA-derived Quasi-Circular Depressions (QCDs). Here Western Arabia (WA) is compared with Ismenius Lacus (IL). We find the buried lowlands in the two regions have total CRAs essentially identical to the global average. Even more intriguing, the WA cratered terrain appears to have a CRA like that of the adjacent buried lowlands,

Frey, H. V.↗

NASA NTRS2018

Simulating Forest Dynamics of Lowland Rainforests in Eastern Madagascar

Ecological modeling and forecasting are essential tools for the understanding of complex vegetation dynamics. The parametric demands of some of these models are often lacking or scant for threatened ecosystems, particularly in diverse tropical ecosystems. One such ecosystem and also one of the world's biodiversity hotspots, Madagascar's lowland rainforests, have disappeared at an alarming rate. The processes that drive tree species growth and distribution remain as poorly understood as the species themselves. We investigated the application of the process-based individual-based FORMIND model to successfully simulate a Madagascar lowland rainforest using previously collected multi-year forest inventory plot data. We inspected the model's ability to characterize growth and species abundance distributions over the study site, and then validated the model with an independently collected forest-inventory dataset from another lowland rainforest in eastern Madagascar. Following a comparative analysis using inventory data from the two study sites, we found that FORMIND accurately captures the structure and biomass of the study forest, with r(squared) values of 0.976, 0.895, and 0.995 for 1:1 lines comparing observed and simulated values across all plant functional types for aboveground biomass (tonnes/ha), stem numbers, and basal area (m(squared)/ha), respectively. Further, in validation with a second study forest site, FORMIND also compared well, only slightly over-estimating shade-intermediate species as compared to the study site, and slightly under-representing shade-tolerant species in percentage of total aboveground biomass. As an important application of the FORMIND model, we measured the net ecosystem exchange (NEE, in tons of carbon per hectare per year) for 50 ha of simulated forest over a 1000-year run from bare ground. We found that NEE values ranged between 1 and -1 t Cha(exp -1)year(exp -1), consequently the study forest can be considered as a net neutral or a very slight carbon sink ecosystem, after the initial 130 years of growth. Our study found that FORMIND represents a valuable tool toward simulating forest dynamics in the immensely diverse Madagascar rainforests.

Forest Productivity↗

DOE OSTI2026

Data from: Lowland Tropical Forests Remain a Methane Sink Under Warming and Long-Term Hurricane Disturbance Recovery

The repository folder contains spreadsheets and script for soil greenhouse gas (GHG) fluxes, soil moisture, soil temperature, air temperature, and precipitation measurements collected from the Tropical Responses to Altered Climate Experiment (TRACE) at the Sabana Research Field Station, El Yunque National Forest (USDA Forest Service; 18°19′28.74″ N, 65°43′50.09″ W) — an open-air field warming experiment located in a lowland tropical forest in Puerto Rico within the Luquillo Experimental Forest (LEF) — six to seven years after Hurricanes Irma and Maria (2017). All spreadsheets for soil and air microclimate data, as well as soil greenhouse gas data, are included as csv files. Air temperature data are also included as Excel spreadsheets (.xlsx). The script is built in R Studio, which is the only software required to run data analysis. This dataset is associated with the manuscript “Larocca Conte G ; Zuvela L ; Cruz-Pérez R ; Barreto-Vélez T ; Becerra-Santillan N ; Campbell S ; Chu H ; Dam T ; Grullón-Penkova I ; Kleit M ; Ortiz-Iglesias D ; Rubio-Lebrón L ; Cavaleri M ; Reed S ; Sihi D ; Wood T ; O'Connell C., 2026. Lowland Tropical Forests Remain a Methane Sink Under Warming and Long-Term Hurricane Disturbance Recovery. Agricultural and Forest Meteorology. In review". The dataset was used to test the effect of warming on soil CH4 dynamics following long-term legacy effects of hurricane disturbance. The dataset includes: - An overall README file in word and pdf format describing methodology and spreadsheets’ structure. - Continuous measurements of soil temperature and moisture from January 2023 to July 2024 measured with Campbell CS655 probes (“TRACE_soil_temperature_and_moisture_2023_cleaned(in).csv” and “TRACE_soil_temperature_and_moisture_2024_cleaned. csv”). - Air temperature data measured with a HOBO MX23O1A data logger (“Hobo air temperature 2023 Sep 2024” and “Hobo air temperature 2023 Sep 2024” – “CSV FILES folders”). - Precipitation data from a nearby weather tower downloaded from González et al. (2025; “sabana_2020-2025.csv”). - Soil CH4 and CO2 effluxes measured intermittently in two summer campaigns (June – August 2023 and June – July 2024) with a LI-COR 8200-01S Portable Smart Chamber coupled with a LI-COR LI-7810 CH4/ CO2/H2O Trace Gas Analyzer (“23_24COMBO2.0.csv”). - R markdown script for data analysis (“Trace new_PLOTS.Rmd”).

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2020

Unraveling the Genetics of Two Key Biomass Traits that Differentiate Upland and Lowland Tetraploid Switchgrass Ecotypes, Colonization by Mycorrhizal Fungi and Frost Tolerance

The overall objectives of the proposal were to dissect the genetics of the ability of switchgrass to interact with arbuscular mycorrhizal fungi (AMF) and to tolerate subzero temperatures, and to investigate the effect of AMF colonization on freezing tolerance and biomass production. In order to achieve this, we generated genetic maps in an F2 mapping population derived from a cross between the lowland genotype AP13 and the upland genotype VS16. In addition to providing a framework for identification of quantitative trait loci (QTL), the genetic maps were used to validate and improve the switchgrass genome assembly. We mapped phenotypic quantitative trait loci (QTL) for AMF colonization and cold tolerance in the F 2 population. We demonstrated that identification of QTL for AMF colonization was achieved only if AMF genus-specific colonization levels were used as phenotypes. No QTL were obtained when the overall level of AMF colonization was used as a trait. We conducted RNASeq on a subset of the F2 progeny following cold acclimation, and developed statistical methods to conduct expression QTL (eQTL) analyses in a polyploid organism. A preliminary analysis of the results identified eQTL for a range of genes that were differentially regulated in the lowland AP13 compared to the upland VS16 under cold acclimation. Once sequencing of the transcriptomes of a temporal replicate of the mapping population that was cold-acclimated using the same conditions has been completed, a final eQTL analysis will be conducted.

09 BIOMASS FUELS↗

NASA NTRS1987

Origin of northern lowland plains: Constraints from boundary morphology

The origin of the surface units of the northern lowland plains of Mars, about one third of the planet's surface, remains unclear after 20 years of analysis of spacecraft data. Hypotheses were put forward to explain the morphologies. The chief problem with constraining models of plains formation is that characterizing plains surface-forming processes is dependent upon the identification of distinctive landforms within the plains. The most commonly cited examples of distinctive morphologies found within the northern lowlands include: wrinkle ridges; small domes; giant polygons; and curvilinear ridges and ground undulations. To further constrain the processes involved, a careful analysis of boundary morphology is being conducted.

Parker, Timothy J.↗