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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 19 records
All sourcesNASA NTRSDOE OSTI
DOE OSTI2024

Genomic profiles of four novel cyanobacteria MAGs from Lake Vanda, Antarctica: insights into photosynthesis, cold tolerance, and the circadian clock

Cyanobacteria in polar environments face environmental challenges, including cold temperatures and extreme light seasonality with small diurnal variation, which has implications for polar circadian clocks. However, polar cyanobacteria remain underrepresented in available genomic data, and there are limited opportunities to study their genetic adaptations to these challenges. This paper presents four new Antarctic cyanobacteria metagenome-assembled genomes (MAGs) from microbial mats in Lake Vanda in the McMurdo Dry Valleys in Antarctica. The four MAGs were classified as Leptolyngbya sp. BulkMat.35, Pseudanabaenaceae cyanobacterium MP8IB2.15, Microcoleus sp. MP8IB2.171, and Leptolyngbyaceae cyanobacterium MP9P1.79. The MAGs contain 2.76 Mbp – 6.07 Mbp, and the bin completion ranges from 74.2–92.57%. Furthermore, the four cyanobacteria MAGs have average nucleotide identities (ANIs) under 90% with each other and under 77% with six existing polar cyanobacteria MAGs and genomes. This suggests that they are novel cyanobacteria and demonstrates that polar cyanobacteria genomes are underrepresented in reference databases and there is continued need for genome sequencing of polar cyanobacteria. Analyses of the four novel and six existing polar cyanobacteria MAGs and genomes demonstrate they have genes coding for various cold tolerance mechanisms and most standard circadian rhythm genes with the Leptolyngbya sp. BulkMat.35 and Leptolyngbyaceae cyanobacterium MP9P1.79 contained kaiB3, a divergent homolog of kaiB.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2024

Depth-specific distribution of bacterial MAGs in permafrost active layer in Ny Ålesund, Svalbard (79°N)

Arctic soil microbial communities may shift with increasing temperatures and water availability from climate change. We examined temperature and volumetric liquid water content (VWC) in the upper 80 cm of permafrost-affected soil over 2 years (2018–2019) at the Bayelva monitoring station, Ny Ålesund, Svalbard. We show VWC increases with depth, whereas in situ temperature is more stable vertically, ranging from -5°C to 5°C seasonally. Prokaryotic metagenome-assembled genomes (MAGs) were obtained at 2–4 cm vertical resolution collected while frozen in April 2018 and at 10 cm vertical resolution collected while thawed in September 2019. The most abundant MAGs were Acidobacteriota, Actinomycetota, and Chloroflexota. Actinomycetota and Chloroflexota increase with depth, while Acidobacteriota classes Thermoanaerobaculia Gp7-AA8, Blastocatellia UBA7656, and Vicinamibacteria Vicinamibacterales are found above 6 cm, below 6 cm, and below 20cm, respectively. All MAGs have diverse carbon-degrading genes, and Actinomycetota and Chloroflexota have autotrophic genes. Further, genes encoding β -glucosidase, N-acetyl-β-D-glucosaminidase, and xylosidase increase with depth, indicating a greater potential for organic matter degradation with higher VWC. Acidobacteriota dominate the top 6 cm with their classes segregating by depth, whereas Actinomycetota and Chloroflexota dominate below ~6 cm. This suggests that Acidobacteriota classes adapt to lower VWC at the surface, while Actinomycetota and Chloroflexota persist below 6cm with higher VWC. This indicates that VWC may be as important as temperature in microbial climate change responses in Arctic mineral soils. Here we describe MAG-based Seqcode type species in the Acidobacteriota, Onstottus arcticum, Onstottus frigus, and Gilichinskyi gelida and in the Actinobacteriota, Mayfieldus profundus.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2016

BEYOND 31 mag arcsec{sup −2}: THE FRONTIER OF LOW SURFACE BRIGHTNESS IMAGING WITH THE LARGEST OPTICAL TELESCOPES

The detection of structures in the sky with optical surface brightnesses fainter than 30 mag arcsec{sup −2} (3 σ in 10 × 10 arcsec boxes; r -band) has remained elusive in current photometric deep surveys. Here we show how present-day telescopes of 10 m class can provide broadband imaging 1.5–2 mag deeper than most previous results within a reasonable amount of time (i.e., <10 hr on-source integration). In particular, we illustrate the ability of the 10.4 m Gran Telescopio de Canarias telescope to produce imaging with a limiting surface brightness of 31.5 mag arcsec{sup −2} (3 σ in 10 × 10 arcsec boxes; r -band) using 8.1 hr on source. We apply this power to explore the stellar halo of the galaxy UGC 00180, a galaxy analogous to M31 located at ∼150 Mpc, by obtaining a radial profile of surface brightness down to μ{sub r} ∼ 33 mag arcsec{sup −2}. This depth is similar to that obtained using the star-counts techniques for Local Group galaxies, but is achieved at a distance where this technique is unfeasible. We find that the mass of the stellar halo of this galaxy is ∼4 × 10{sup 9} M {sub ⊙}, i.e., (3 ± 1)% of the total stellar mass of the whole system. This amount of mass in the stellar halo is in agreement with current theoretical expectations for galaxies of this kind.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2026

Data Mining of Groundwater to Identify MAGs with Methane, Propane and Toluene Monooxygenases

Whole genome sequencing datasets, involving more than 600 groundwater samples, from nine countries, were analyzed to identify metagenome assembled genomes (MAGs) containing full operons for propane monooxygenase, soluble methane monooxygease, toluene monooxygenase and particulate ammonia/methane monooxygenase. The enzymes encoded by these genes are a focus of interest because of their ability to degrade common groundwater contaminants. Due to the large amount of data, sequence analyses involved more than 80 individual KBase narratives. The approach followed the KBase tutorial called "Metagenome-Assembled Genome Extraction from a Compost Microbiome Enrichment" The generated MAGs were exported from each individual narrative into separate summary KBase narratives for each monooxygenase. Three KBase narratives were generated for particulate ammonia/methane monooxygenase, due to the large number of MAGs identified.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2014

NOVA AQUILAE 1918 (V603 Aql) FADED BY 0.44 MAG PER CENTURY FROM 1938 TO 2013

We present the light curve of the old nova V603 Aql (Nova Aql 1918) from 1898-1918 and 1934-2013 using 22,721 archival magnitudes. All of our magnitudes are either in, or accurately transformed into, the Johnson B and V magnitude systems. This is vital because offsets in old sequences and the visual-to-V transformation can cause errors of 0.1-1.0 mag if not corrected. Our V603 Aql light curve is the first time that this has been done for any nova. Our goal was to see the evolution of the mass accretion rate on a century timescale, and to test the long-standing prediction of the Hibernation model that old novae should be fading significantly in the century after their eruption is over. The 1918 nova eruption was completely finished by 1938 when the nova decline stopped, and when the star had faded to fainter than its pre-nova brightness of B = 11.43 ± 0.03 mag. We find that the nova light from 1938 to 2013 was significantly fading, with this being seen consistently in three independent data sets (the Sonneberg plates in B, the American Association of Variable Star Observers (AAVSO) V light curve, and the non-AAVSO V light curve). We find that V603 Aql has been declining in brightness at an average rate of 0.44 ± 0.04 mag per century since 1938. This work provides remarkable confirmation of an important prediction of the Hibernation model.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2026

Post Wildfire Soil Bacterial MAGs and Metagenome Analysis

We compare the differences between bacteria in soil affected by a wildfire to an unaffected area from Minnewaska State Park, NY located in the biodiverse northern Shawangunk ridge. We detail our metagenomic sequencing data, relative abundance of bacterial phyla, and the taxonomic classification of three high-quality MAGs.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2022

PNV J00444033+4113068: Early superhumps with 0.7 mag amplitude and non-red color

Abstract In the first days of WZ Sge-type dwarf nova (DN) outbursts, the 2 : 1 resonance induces a spiral arm structure in the accretion disk, which is observed as early superhumps in optical light curves. We reports on our optical observations of an eclipsing WZ Sge-type DN PNV J00444033+4113068 during its 2021 superoutburst using the 3.8 m Seimei telescope and through the Variable Star Network collaboration. The eclipse analysis showed that its orbital period was 0.055425534(1) d. Our observations confirmed early superhumps with an amplitude of 0.7 mag, the largest amplitude among known WZ Sge-type DNe. More interestingly, its early superhumps became the reddest around their secondary minimum, whereas other WZ Sge-type DNe show the reddest color around the early superhump maximum. The spectrum around the peak of the outburst showed two double-peaked emission lines of He ii 4686 Å and Hα with a peak separation of ≥700 km s−1, supporting a very high-inclination system. With the early superhump mapping, the unique profile and color of the early superhump are successfully reproduced by an accretion disk with a vertically extended double arm structure. Therefore, a large amplitude and a unique color behavior of the early superhumps in PNV J00444033+4113068 can be explained by the 2 : 1 resonance model along with other WZ Sge-type DNe.

Tampo, Yusuke (ORCID:0000000301963936)↗
DOE OSTI2023

Lawrence Livermore National Laboratory Experimental Test Site 300 (Site 300): Site 300 Roadway Improvements - Chem Mag Loop Soil Sampling and Analysis Plan (May 2023)

This Soil Sampling and Analysis Plan (SAP) was prepared by the Environmental Function Area (EFA)/Technical Services Department (TSD) of the Environment, Safety & Health (ES&H) Directorate for the Project Management Office (PMO) for the proposed Roadway Improvements Project at the Chem Mag Loop (project). The purpose of the SAP is to describe the procedures for collection and analysis of environmental samples and evaluation of analytical data (chemical and radiological) to determine management options of excavated soil during project construction. This SAP follows criteria established in Lawrence Livermore National Laboratory’s (LLNL) Soils Screening and Management Plan (SSMP) (LLNL 2022), which was formalized in accordance with U.S. Environmental Protection Agency (EPA) guidance for developing Data Quality Objectives for environmental data (EPA 2006) and the Multi-Agency Radiation Survey and Site Investigation Manual (MARSSIM) guidance (U.S. NRC, U.S. EPA, U.S. DOE, and U.S. DOD 2000). The scope of this SAP is based on preliminary design information provided to EFA by PMO.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2025

MAGs from alcoholic fermentation in sugarcane biorefineries

Genome-resolved metagenomics was applied to recover microbial metagenome-assembled genomes (MAGs) from alcoholic fermentation samples collected at two sugarcane biorefineries in São Paulo state, Brazil, during the 2024 harvest season.

59 BASIC BIOLOGICAL SCIENCES↗