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STURM: Resuspension Mesocosms with Realistic Bottom Shear Stress and Water Column Turbulence for Benthic-Pelagic Coupling Studies: Design and Applications

Shear TUrbulence Resuspension Mesocosm (STURM) tanks, with high instantaneous bottom shear stress and realistic water column mixing in a single system, allow realistic benthic-pelagic coupling studies with sediment resuspension. The 1 m3 tanks can be programmed to produce tidal or episodic sediment resuspension for extended time periods (e.g. 4 weeks), over muddy sediments with a variety of benthic organisms. A resuspension paddle produces uniform bottom shear stress across the sediment surface while gently mixing a 1 m deep overlying water column. The STURM tanks can be programmed to different magnitudes, frequencies, and durations of bottom shear stress (and thus resuspension) with proportional water column turbulence levels over a wide range of mixing settings for benthic-pelagic coupling experiments. Over ten STURM calibration settings, RMS turbulent velocity ranged from 0.26 to 4.52 cm s−1, energy dissipation rate from 0.0016 to 2.65 cm2 s−3, the average bottom shear stress from 0.0035 to 0.19 Pa, and the instantaneous maximum bottom shear stress from 0.07 to 1.7 Pa. We have performed four 4-week benthic-pelagic coupling ecosystem experiments with tidal resuspension and stepwise erosion experiments (both with and without infaunal bivalves), carried out experiments on oyster biodeposit resuspension, mimicked storms overlain on tidal resuspension, and studied the effects of varying frequency and duration of resuspension on sedimentary contaminant release. The large size of the tanks allows water quality and particle measurements using standard oceanographic instrumentation. The realistic scale and complexity of the contained ecosystems has revealed indirect feedbacks and responses that are not observable in smaller, less complex experimental systems.

Porter, Elka T.↗

Biochemical Composition of Dissolved Organic Matter Released During Experimental Diatom Blooms

An axenic culture of Skeletonema costatum was grown to late-log phase to examine the molecular weight distribution and the biochemical composition of high molecular weight dissolved organic matter released in the absence of actively growing bacteria. A second culture was grown in a 5 m(exp 3) mesocosm and placed in darkness for a period of 51 days to examine the impact of phytoplankton bloom dynamics and microbial decomposition on dissolved (DOM) and particulate organic matter (POM) composition. DOM was separated using tangential-flow ultrafiltration into three nominal size fractions: LDOM (less than 1 kDa DOM), HDOM (1-30 kDa) and VHDOM (30 kDa-0.2 micron) and characterized. Both axenic and mesocosm diatom blooms released 28-33% of net primary production as dissolved organic carbon (DOC). In the axenic culture, HDOM and LDOM each comprised about half of the diatom-released DOC with less than l% as VHDOM. Diatoms from both experiments released carbohydrate-rich high molecular weight DOM. Much of the axenic diatom-released high molecular weight DOC could be chemically characterized (61% of HDOM and 78% of VHDOM) with carbohydrates as the primary component (45% of HDOM and 55% of VHDOM). Substantial amounts of hydrolyzable amino acids (16% of HDOM and 22% of VHDOM) and small amounts of lipids (less than 1%) were also released. Proportions of recognizable biochemical components in DOM produced in the mesocosm bloom were lower compared to the axenic culture. The presence of bacterial fatty acids and peptidoglycan-derived D-amino acids within high molecular weight fractions from the mesocosm bloom revealed that bacteria contributed a variety of macromolecules to DOM during the growth and decay of the diatom bloom. Release of significant amounts of DOC by diatoms demonstrates that DOM excretion is an important component of phytoplankton primary production. Similarities in high molecular weight DOM composition in marine waters and diatom cultures highlight the importance of phytoplankton to DOM composition in the ocean.

Mannino, Antonio↗

Light, temperature, and leaf nitrogen distribution in the tropical rain forest of Biosphere 2 and their importance in the mathematical models for global environmental changes

As the environmental changes occur throughout the world in rapid rate, we need to have further understandings for our planet. Since the ecosystems are so complex, it is almost impossible for us to integrate every factor. However, mathematical models are powerful tools which can be used to simulate those ecosystems with limited data. In this project, I collected light intensity, canopy leaf temperature and Air Handler (AHU) temperature, and nitrogen concentration in the leaves for different profiles in the rainforest mesocosm. These data will later be put into mathematical models such as "big-leaf" and "sun/shade" models to determine how these factors will affect CO2 exchange in the rainforest. As rainforests are diminishing from our planet and their existence is very important for all living things on earth, it is necessary for us to learn more about the unique system of rainforests and how we can co-exist rather than destroy.

Tohda, Motofumi↗