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At least 19 records

Regions of negative Bz in the Tsyganenko 1989 model neutral sheet

A disturbing feature of the Tsyganenko (1989) model magnetic field, namely the occurrence of negative Bz in the model neutral sheet is pointed out. On the basis of observations of Bz in the neutral sheet it is concluded that this is an artifact of the model and not a real effect. This feature of the model should be considered when the model is used either to infer mappings from the ionosphere to the vicinity of the neutral sheet or as a tool in theoretical studies. It is proposed that in the development of future models, it would be useful for the distribution of Bz in the neutral sheet to be imposed as a constraint on the model.

Donovan, E. F.↗

Modeling Neutral Densities Downstream of a Gridded Ion Thruster

The details of a model for determining the neutral density downstream of a gridded ion thruster are presented. An investigation of the possible sources of neutrals emanating from and surrounding a NEXT ion thruster determined that the most significant contributors to the downstream neutral density include discharge chamber neutrals escaping through the perforated grids, neutrals escaping from the neutralizer, and vacuum facility background neutrals. For the neutral flux through the grids, near- and far-field equations are presented for rigorously determining the neutral density downstream of a cylindrical aperture. These equations are integrated into a spherically-domed convex grid geometry with a hexagonal array of apertures for determining neutral densities downstream of the ion thruster grids. The neutrals escaping from an off-center neutralizer are also modeled assuming diffuse neutral emission from the neutralizer keeper orifice. Finally, the effect of the surrounding vacuum facility neutrals is included and assumed to be constant. The model is used to predict the neutral density downstream of a NEXT ion thruster with and without neutralizer flow and a vacuum facility background pressure. The impacts of past simplifying assumptions for predicting downstream neutral densities are also examined for a NEXT ion thruster.

Soulas, George C.↗

BRCore: an R package implementing flexible selection of core taxa using contribution to Bray-Curtis dissimilarity and neutral model fitting

Identifying core taxa in microbial ecology highlights groups likely to participate in a broad range of potential ecological interactions. Here, we present BRCore, an R package to identify core taxa using abundance-occupancy distributions and beta-diversity contributions across ecological niches, and predict stochastic and deterministic taxa.

59 BASIC BIOLOGICAL SCIENCES↗

Modeling neutral defects in III-V ternary alloys with a special quasirandom structure: Analysis of As- and III-site point defects in InGaAs

While first-principles density functional theory modeling has become a vital tool to investigate defect properties in semiconductors, the lack of crystalline periodicity in pseudobinary random composition alloys, such as In 1−𝑥 ⁢Ga 𝑥 ⁢As, complicates such analyses. We present a simulation strategy to systematically take into account the variability in the local defect environment in order to predict statistical properties of neutral intrinsic defects in In 1−𝑥⁢ Ga 𝑥 ⁢As. We use a comprehensive sampling from a modest-sized 64-atom special quasirandom structure (SQS) to define a statistically representative set of defects, and use a 512-atom hypercell, a 2 × 2 × 2 supercell of SQS supercells, to achieve cell-size convergence. We articulate an equivalent site principle and describe how it constrains atomic chemical reference energies in computation of defect formation energies in pseudobinary alloys. A simple protocol for estimating reference energies for the Ga and In atoms sharing the III site succeeds in obtaining the equivalence of defects at Ga-sites and In sites in the SQS supercell, (<30 meV differences in average formation energies). For III-site defects, such as the As antisite As III , the statistical variability in formation energies is modest, ≈ 0.1–0.2 eV. The variability in formation energy at As-site defects, such as the As vacancy 𝑣 As , can be much larger, >1 eV. The As antisite is shown to be a low-energy defect and the most likely to be present in as-grown materials, just as in GaAs. All other defects are higher-energy defects unlikely to be important in native material, but potentially important in radiation-damaged material. With a strong variability in defect energies, especially on the As-site, explicit consideration of statistical variability due to compositional randomness will be imperative for meaningful and quantitative comparisons to experiment.

Density functional theory↗

Vacuum Neutral Transport Model in UEDGE for Tokamak Far Scrape‐Off Layer

A model for neutral transport in the far scrape-off layer (SOL) vacuum region (vacuum neutral model) has been developed and implemented in UEDGE. Free-streaming neutral trajectories between the outermost UEDGE boundary and the vessel wall are preprocessed using DEGAS2 to construct a tele-transport matrix that captures non-local neutral relocation through the vacuum. Here, this matrix is then used in UEDGE as a non-local boundary condition for the neutral equations, preserving the robustness and convergence of the implicit solver without introducing statistical noise. Simulations of a DIII-D lower single-null configuration show that the vacuum neutral model relocates neutrals from the divertor to the upstream region, increasing the outer midplane separatrix density required for detachment onset by about 30%. However, the characteristic target temperature at detachment (T e, osp ~ 3 - 4eV) and the radiation front behavior remain unchanged.

DEGAS2↗

Assessing mechanisms for microbial taxa and community dynamics using process models

Disentangling the assembly mechanisms controlling community composition, structure, distribution, functions, and dynamics is a central issue in ecology. Although various approaches have been proposed to examine community assembly mechanisms, quantitative characterization is challenging, particularly in microbial ecology. Here, we present a novel approach for quantitatively delineating community assembly mechanisms by combining the consumer–resource model with a neutral model in stochastic differential equations. Using time-series data from anaerobic bioreactors that target microbial 16S rRNA genes, we tested the applicability of three ecological models: the consumer–resource model, the neutral model, and the combined model. Our results revealed that model performances varied substantially as a function of population abundance and/or process conditions. The combined model performed best for abundant taxa in the treatment bioreactors where process conditions were manipulated. In contrast, the neutral model showed the best performance for rare taxa. Our analysis further indicated that immigration rates decreased with taxa abundance and competitions between taxa were strongly correlated with phylogeny, but within a certain phylogenetic distance only. The determinism underlying taxa and community dynamics were quantitatively assessed, showing greater determinism in the treatment bioreactors that aligned with the subsequent abnormal system functioning. Given its mechanistic basis, the framework developed here is expected to be potentially applicable beyond microbial ecology.

59 BASIC BIOLOGICAL SCIENCES↗

Monte Carlo particle-trajectory models for neutral cometary gases. I - Models and equations. II - The spatial morphology of the Lyman-alpha coma

The mathematical derivations of various methods employed in the Monte Carlo particle-trajectory model (MCPTM) are presented, and the application of the MCPTM to the calculation of the photochemical heating of the inner coma through the partial thermalization of cometary hydrogen atoms produced by the photodissociation of water is discussed. This model is then used to explain the observed morphology of the spatially extended Ly-alpha comas of comets. The rocket and Skylab images of the Ly-alpha coma of Comet Kohoutek are examined.

Combi, Michael R.↗

Collisional-Radiative Models of Neutral and Singly-Ionized Xenon in Hall Thrusters: Experimental Validation and Model Investigations

The recently developed collisional radiative (CR) models for neutral xenon (Xe I) and singly charged xenon ion (Xe II) described by Chaplin et al. in the paper "Insights from Collisional-Radiative Models of Neutral and Singly-Ionized Xenon in Hall Thrusters" also submitted to the 2021 AIAA Propulsion and Energy Forum are more thoroughly investigated. Comparisons between the existing and recently developed JPL Xe I CR models are done and reasons for discrepancies between the two models are explored. An experiment to validate the Xe II CR model is carried out in the anode region of the UCLA Plasma interactions facility. The Xe II CR model is applied to measured xenon ion emission line intensities to determine electron temperature and density. Spatial resolution of these optical measurements is obtained through an Abel inversion for direct comparison to Langmuir probe results. Although the measured electron densities were on the order of $10^{17}$ m$^{-3}$ and the Xe II CR model is most suitable for use with densities above $10^{18}$ m$^{-3}$ due to the strong dependence of the line ratios on electron temperature in that regime, initial results from the validation experiment show reasonable agreements between the optical and Langmuir probe results. The 441 nm to 605 nm line ratio appears to have the most promise for non-intrusive electron temperature measurements with the Xe II CR model. Shortcomings of the Xe II CR model revealed in the validation experiment are to be explored further.

Lobbia, Robert B.↗

Machine Learning Approach to Modeling of Neutral Particles Transport in Plasma

A propagator‐based approach is investigated for Monte‐Carlo (MC) modeling of neutral particle transport in fusion boundary plasmas. The propagator is based on a Green's function for the neutral kinetic equation, which depends on the plasma profiles. A neural network (NN)‐based model for the propagator provides a fast and accurate solution for the neutral distribution function in plasma. Preliminary results from a small 1D test problem look encouraging. The proposed approach, a propagator‐based NN model for neutral transport in plasma, has potential for generalization to higher dimensions and efficient coupling with plasma models.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

An atomic model for neutral and singly ionized uranium

A model for the atomic levels above ground state in neutral, U(0), and singly ionized, U(+), uranium is described based on identified atomic transitions. Some 168 states in U(0) and 95 in U(+) are found. A total of 1581 atomic transitions are used to complete this process. Also discussed are the atomic inverse lifetimes and line widths for the radiative transitions as well as the electron collisional cross sections.

Maceda, E. L.↗

Effect of energetic oxygen atoms on neutral density models.

The dissociative recombination of O2(+) and NO(+) in the F region results in the production of atomic oxygen and atomic nitrogen with substantially greater kinetic energy than the ambient atoms. In the exosphere these energetic atoms have long free paths. They can ascend to altitudes of several thousand kilometers and can travel horizontally to distances of the order of the earth's radius. The distribution of energetic oxygen atoms is derived by means of models of the ion and neutral densities for quiet and disturbed solar conditions. A distribution technique is used to study the motion of the atoms in the collision-dominated region. Ballistic trajectories are calculated in the spherical gravitational field of the earth. The present calculations show that the number densities of energetic oxygen atoms predominate over the ambient atomic oxygen densities above 1000 km under quiet solar conditions and above 1600 km under disturbed solar conditions.

Rohrbaugh, R. P.↗

Modelling the Neutral Atmosphere and Plasma Environment of Saturn

The first year of this contract has resulted in two publications with the P.I. and co-I Jurac as lead authors and two publications where these team members are co-authors. These papers discuss modeling work undertaken in preparation for Cassini; the goal was to summarize our current best knowledge of the ion and neutrals sources and distributions. One of the major goals of this project is to improve models of the plasma and neutral environment near Saturn. The paper "A self-consistent model of plasma and neutrals at Saturn: Neutral cloud morphology" [Jurac and Richardson, 20051 presents results on the neutral clouds near Saturn using a model which for the first times treats the ions and neutrals self-consistently. We also for the first time include a directly sputtered H source. The Voyager and HST observations are used as model constraints. The neutral source is adjusted to give a good match to the HST observations of OH. For this initial run the ion parameters from Richardson et al. are used; charge exchange with ions is a major neutral loss process. The neutral profile derived from the model is then used in a model of plasma transport and chemistry (with the plasma diffusion rate the only free parameter). This model gives new values of the ion composition which are then fed back into the neutral model. This iteration continues until the values converge.

Richardson, John D.↗

An analysis of the high-latitude thermospheric wind pattern calculated by a thermospheric general circulation model. II - Neutral parcel transport

A diagnostic package developed to analyze runs made by the National Center for Atmospheric Research thermosphere general circulation model is used to calculate neutral parcel trajectories in the high-latitude E and F regions. Parcel trajectories are presented for a number of different cases to illustrate the main characteristics of F region parcel transport in the winter high-latitude region. Several examples of E region parcel trajectories are similarly analyzed, concentrating on both the southern (summer) and northern (winter) regions. F region parcel trajectories are calculated backward in time from passage over a given geographical location to illustrate the 'genesis' of those parcels whose velocities can be monitored from a ground-based Fabry-Perot observatory.

Killeen, T. L.↗

Analytic model for neutral penetration and plasma fueling

Neutral atoms recycled from wall interaction interact with confined plasma, thereby refuelling it, most strongly in the region closest to the wall. This occurs near the X-point in diverted configurations, or else near the wall itself in limited configurations. A progression of analytic models is developed for neutral density in the vicinity of a planar or linear source in an ionising domain. First-principles neutral transport simulations with DEGAS2 are used throughout to test the validity and limits of the model when using equivalent sources. The model is further generalised for strong plasma gradients or the inclusion of charge exchange. An important part of the problem of neutral fuelling from recycling is thereby isolated and solved with a closed-form analytic model. A key finding is that charge exchange with the confined plasma can be significantly simplified with a reasonable sacrifice of accuracy by treating it as a loss. The several assumptions inherent to the model (and the simulations with which it is compared) can be adapted according to the particular behaviour of neutrals in the divertor and the manner in which they cross the separatrix.

fusion plasma↗

Modelling the neutral gas environment of comets with special application to P/Halley

A technique has been developed which allows relatively accurate modelling of cometary gas production from nothing more than a visible light curve. Application to P/Halley suggests that the production rate of parent molecules will be about 2.6 x 10 to the 29th/second on March 10, 1986, for example. The uncertainties and intrinsic limitations in this approach are outlined. The theory is then extended to predictions of abundance of other gaseous species, and a photometric model of these gases is provided.Combined with the dust model of Divine (1981), preliminary predictions of the luminance of P/Halley, as seen in any direction from inside the coma or outside, can be provided for in the 3000-7000 A wavelength range.

Newburn, R. L., Jr.↗

Neutral atmospheric models compatible with satellite orbital decay and incoherent scatter measurements

A correlation study was made of the variations of the exospheric temperature extrema with various combinations of the monthly mean and daily values of the 2800 MHz and Ca:2 solar indices. The phase and amplitude of the semi-annual component and the term dependent on Kp were found to remain almost the same for the maximum and minimum temperature. The term dependent on the 27 day component of the solar activity was found to be about four times as large for the diurnal maximum as for the minimum. Measurements at Arecibo have shown that temperature gradient changes at 125 km are consistent with the phase difference between the neutral temperature and density maxima. This is used to develop an empirical model which is compatible with both the satellite measurements and the available incoherent scatter measurements. A main feature of this model is that day length is included as a major model parameter.

Rohrbaugh, J. L.↗