High Performance Computing User Group Meeting - June 11, 2025
INL HPC team provided updates related to the INL HPC program and HPC systems for HPC User Group Quarterly Review - June 11, 2025
99 - GENERAL AND MISCELLANEOUS↗
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The South Pole Telescope AGN Monitoring Campaign: First Release of SPTpol Bright AGN Light Curves
The South Pole Telescope (SPT) collaboration has recently embarked upon a campaign to monitor the brightness of a sample of active galactic nuclei (AGN), both in real time and in archival SPT data. The original design of the SPT was optimized for observations of the cosmic microwave background (CMB) at arc-minute and larger angular scales, and it has been used for this purpose for nearly twenty years, using three generations of CMB cameras. Recently it has been recognized that data from CMB experiments have the potential to be used for AGN monitoring. In this paper, we present the first public release of data from a full sample of SPT-monitored AGN, comprising 158 AGN light curves and associated data from the SPTpol camera, which was operational from 2012-2016. These light curves were created using observations from the SPTpol 500 deg$^{2}$ survey, in which the instrument was used to scan a 500 deg$^2$ patch of the sky several times per day with detectors sensitive to radiation in bands centered at 90 and 150 GHz. We provide a comprehensive description of the observations, the data processing methods, and the resulting light curve catalog. As an example of analyses that these data enable, we searched for a correlation between variability and spectral index, and we looked for ``bluer-when-brighter'' trends in the sample. Our analysis finds $> 10 σ$ correlation between fractional intrinsic variance and mean spectral index in the sample, but no significant evidence for bluer-when-brighter trends. The datasets from this study can be accessed through the SPT Treasury Record of AGN With Historical Activity and Time-Series or STRAWHAT catalog. This initial data release includes SPTpol light curves at 90 and 150 GHz, focusing on total intensity. In later updates, SPTpol polarization data and new observations from the SPT-3G instrument at 90, 150, and 220 GHz will be included.
Hood, J.C., II [Chicago U., KICP; Chicago U., Astr↗
Shrubs Strongly Influence Snow Properties in Two Subarctic Watersheds
Understanding changes in snow distribution in permafrost ecosystems is fundamental to predicting their response to future climate change. The expansion of tall shrubs into tundra ecosystems can trap snow and insulate permafrost ecosystems during the winter, but the overall insulation effect is dependent upon many ecosystem properties. To study shrub–snow–ground interactions, small temperature sensors were deployed at two research sites on the Seward Peninsula of Alaska, USA, during the 2019–2020 winter. Snow temperatures were used to extrapolate multiple metrics, including freezing n-factors, the snow insulation effect, snow cover duration, and the length of the snowmelt period. Statistical and spatial analysis showed that shrub patches were a dominant control on all snow metrics. Within shrub patches, average ground temperatures were 2.1°C warmer, snow persisted 50 days longer, snow insulation was double, and a longer, later spring snowmelt period occurred compared to nonshrubby areas. Site-level differences contributed relatively little to variation in snow metrics, indicating that shrub presence is an overarching driver of snow–ground interactions at the locations examined. Shrub expansion, which is anticipated under climate change, will strongly impact future permafrost distribution and Arctic energy, water, and carbon cycles through snow–shrub–ground feedbacks.
54 ENVIRONMENTAL SCIENCES↗
Flower‐Type Organized Trade‐Wind Cumulus: A Multi‐Day Lagrangian Large Eddy Simulation Intercomparison Study
Shallow cumulus cloud fields in subtropical marine trade wind environments, particularly over the tropical Atlantic Ocean, show distinct organizational patterns. Among these, Flower‐type clouds are characterized by expansive stratiform cloud patches surrounded by regions of scattered convection. The objectives of this study were (a) to construct a case study of a time period during the EUREC 4 A/ATOMIC field campaign when Flower‐type organization was observed, (b) to evaluate the fidelity of a multi‐model ensemble of large eddy simulations of that case, and (c) to analyze the interaction between cloud and precipitation processes and mesoscale organization in the simulations. The simulations follow a quasi‐Lagrangian trajectory, allowing mesoscale features to develop over time in a domain that follows the boundary‐layer airmass. The results show a broad agreement in simulated thermodynamic properties across different LES codes, with Flower‐type cloud patches appearing within hours of each other. The consensus among models is consistent with observations made during the EUREC 4 A/ATOMIC field campaign on the specific day of interest. The cloud structure reveals three distinct peaks in the joint probability densities of cloud base and cloud top height, with the dominant peak at any given time influenced by the stage of cloud organization. The simulated cloud system evolution reveals consistent occurrence of maxima in liquid water path and rain rate before Flower reaches its maximum length scale. Targeted sensitivity tests reveal a weak relationship between Cloud Droplet Number concentration and the extent/degree/type of organization.
EUREC4A↗
Thermal stress in degraded forests in the Brazilian Amazon Arc of Deforestation
Understanding thermal stress in tropical forests has taken on new urgency in light of accelerating climate change and expansion of deforestation and forest degradation. Degraded tropical forests in particular may be approaching critical temperature thresholds even more rapidly than intact forests, with implications for tree survival and ecosystem recovery. We investigate thermal stress in degraded tropical forests within the Brazilian Amazon Arc of Deforestation. Using land surface temperature data from the ECOsystem Spaceborne Thermal Radiometer Experiment on the international Space Station (ECOSTRESS), we compared canopy temperatures of intact, selectively logged, and burned forests in Feliz Natal, Mato Grosso, Brazil. Upper canopy temperatures in previously burned forests were 4.1% higher (mean = 36.5 °C) and 50.9% more variable compared to intact and logged forests, which showed remarkably similar temperature distributions (means of 34.9 °C and 35.1 °C, respectively). Modeled leaf temperature distributions based on canopy temperature measurements from one of the warmest days in a 2 year dry season record indicated that 87% of leaves in the warmest burned forest patches exceeded the temperature threshold where respiration surpasses photosynthesis, compared to approximately 72%–74% in intact and logged forests, respectively, in the same time period. After controlling for environmental factors, burned forests were predicted to be 2.6 °C warmer on average [1.39 °C–3.96 °C, 95% credible interval] than intact forests across a 5–40 m canopy height range. Burned forests showed modest thermal recovery over time, with temperatures decreasing by approximately 1.2 °C over a 30 year recovery period. In contrast, logged forests showed minimal thermal differences from intact forests (−0.353 on average, [−1.125–0.274, 95% credible interval]) and negligible change (0.15 °C) over the same timeframe. While the absolute probabilities of exceeding damaging thermal thresholds remain low across all forest types under current climate conditions, the probability of leaves exceeding temperatures that cause permanent leaf damage was ten times higher in burned forests, with implications for the future of burned forest regeneration in water-limited regions of the Amazon basin. In particular, the combination of higher mean temperatures, greater temperature variability, and more frequent exposure to damaging thermal thresholds implies that burned tropical forests will experience substantially higher mortality rates and slower biomass recovery compared to intact and selectively logged forests, especially in water-limited regions where trees cannot rely on evaporative cooling to moderate canopy temperatures.
Brazilian Amazon Arc of Deforestation↗
Patch-level CO2 and CH4 fluxes and porewater concentrations in experimental wetlands, 5 and 10 PPT saltwater intrusion simulations, Louisiana 2023-2024
This dataset containes carbon dioxide (CO2) and methane (CH4) flux measurements collected from wetland vegetation patches dominated by Typha domingensis and Panicum hemitomon to assess greenhouse gas flux responses to experimental saltwater intrusion (SWI) pulses. Measurements were conducted before, during, and after simulated SWI events at target salinities of approximately 5 parts per thousand (ppt) with durations of 6, 10, and 17 days and 10 ppt with a duration of 48 days, alongside a control wetland (with no salinity added, flood manipulation only). These data were generated to evaluate how the magnitude and duration of SWI alter wetland carbon exchange and related biogeochemical and plant responses. This data package includes flux measurements from the wetland surface (i.e, soil/water surface and enclosed vegetation) and from the soil/water surface only; porewater and surface water concentrations of CO2 and CH4; salinity, pH, electrical conductivity collected in porewater (at 5, 10, and 20 cm soil depths) and in surface water; soil redox potential; leaf spectral indices, leaf vapor pressure deficit, stomatal conductance; water level, salinity, and photosynthetically active radiation; and aboveground biomass.
EARTH SCIENCE > AGRICULTURE > SOILS > SOIL RESPIRA↗
The 2024 “Hacking Limnology” Workshop Series and Virtual Summit: Increasing Inclusion, Participation, and Representation in the Aquatic Sciences
The 4th Aquatic Ecosystem MOdeling Network—Junior (AEMON-J) Hacking Limnology Workshop and 5th Virtual Summit: Incorporating Data Science and Open Science in the Aquatic Sciences (DSOS) convened 15–19 July 2024. During the week, these joint communities engaged in activities at the intersection of big data, open science, modeling, remote sensing, and the aquatic sciences. The weeklong event, with over 100 aquatic science practitioners and enthusiasts, followed a similar structure to previous years, comprising three days of workshops followed by two days of the virtual summit.
54 ENVIRONMENTAL SCIENCES↗
Control Mechanisms for Self‐Sealing in Activated Clay‐Rich Faults Through Controlled Hydraulic Injection Experiment
Abstract In a high‐pressure injection fault activation experiment conducted at the Mont Terri underground research laboratory in Switzerland, the transmissivity of the Opalinus Clay fault significantly increased due to opening and shearing. The fluid injection, spanning a few hours, generated a 10 m radius fault activation patch. Subsequent pressure pulse tests conducted bi‐weekly for a year revealed the gradual return of fault transmissivity to its initial state. The study utilized fluid pressure decay analysis, optical fiber monitoring, continuous active source seismic measurements and borehole displacement sensors for measuring fault displacements. The fault zone exhibited a dilation of approximately 1.4 mm, associated with both normal and tangential movements during activation, resulting in a sudden transmissivity increase from 1 × 10 −12 to 3.2 × 10 −7 m 2 /s. Early post‐activation, transient compaction and the subsequent slow compaction were observed, transitioning to an extension regime. The pressure pulse tests demonstrated a rapid transmissivity drop by more than two orders of magnitude within the first 10 days, followed by a gradual and less pronounced decrease. Plastic shear and compaction dominated the transmissivity evolution until 70 days after injection ended, followed by a period where additional factors, such as clay mineral swelling, influenced the behavior. Extrapolation suggested a sealing process taking at least 50 years after the initial activation. Plain Language Summary A field‐scale fault activation experiment offers valuable insights into the elasto‐plastic processes governing the sealing of shale faults. The experiment reveals a rapid increase in the fault's transmissivity by approximately five orders of magnitude during activation. Subsequent observations show a gradual transmissivity decrease by about three orders of magnitude post‐activation, with slow long‐term plastic shear and compaction of the fault competing against secondary processes, notably clay mineral swelling. All conceptual models employed to interpret these field data converge on the estimation that the fault's return to its initial low transmissivity state would require a minimum of 50 years. Key Points High‐pressure injection fault activation experiment at the Mont Terri underground research laboratory Continuous transmissivity measurements record self‐sealing inside a clay‐rich fault zone Transmissivity undergoes a phase of domination by slow plastic compaction and shearing during the initial post‐activation period, with mineral swelling exerting its influence over the long term
Guglielmi, Yves↗