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Remote Sensing and Holocene Vegetation: History of Global Change
Predictions of the future evolution of the earth's atmospheric chemistry and its impact on global circulation patterns are based on Global Climate Models (GCM's) that integrate the complex interactions of the biosphere, atmosphere and the oceans. Most of the available records of climate and environment are shortterm records (from decades to a few hundred years) with convolved information of real trends and short-term fluctuations. GCM's must be tested beyond the short-term record of climate and environment to insure that predictions are based on trends and therefore are appropriate to support long term policy making. An appropriate timeframe should extend over the Holocene period (the last 10,000 years) when most contemporary climate and environmental processes began. Since its inception in 1916, pollen analysis has successfully reconstructed the paleoecology of the last 10,000 years for many sites around the world, thus providing a powerful time-link between short- and long-term processes in the biosphere. However, pollen analytic results cannot be used in physiological models driven by remotely sensed data. Further, modern ecology and climate data are necessary to calibrate pollen analytical models. These are available for extensive regions in the northern hemisphere, particularly for eastern United States and Canada, and western Europe. In other parts of the world, weather stations are scattered, records extend over a period of only few years, and there are no systematic climate records for large portions of the globe. This is the case of Patagonia in Argentina where a few weather stations are located close to the Atlantic seaports, fewer stations are in towns located near the eastern Andean foothill, and fewer still are scattered on the extensive Patagonian plateau. This problem became evident after completion of the Argentine-German Program of Palynology (PROPAL), a cooperative effort of National University of Mar del Plata (Argentina) and University Bamberg (Germany) to produce a modern pollen database for the Pampa and Patagonia regions.
Exploring the Role of Humans and Climate over the Balkan Landscape: 500 Years of Vegetational History of Serbia
We present the first, well-dated, high-resolution record of vegetation and landscape change from Serbia, which spans the past 500 years. Biological proxies (pollen, spores, and charcoal), geochemical analysis through X-ray Fluorescence (XRF), and a detailed chronology based on AMS C-14 dating from a western Serbian sinkhole core suggest complex woodland-grassland dynamics and strong erosional signals throughout the Little Ice Age (LIA). An open landscape with prominent steppe vegetation (e.g. Poaceae, Chenopodiaceae) and minor woodland exists during 1540-1720 CE (early LIA), while the late LIA (1720-1850 CE) in this record shows higher tree percentages possibly due to increased moisture availability. The post LIA Era (1850-2012 CE) brings a disturbed type of vegetation with the presence of weedy genera and an increase in regional woodland. Anthropogenic indicators for agricultural, pastoral and fire practices in the region together attest to the dominant role of humans in shaping this Balkan landscape throughout the interval. The changing nature of human interference, potentially as a response to underlying climatic transitions, is evident through large-scale soil depletion resulting from grazing and land clearance during the early LIA and stabilization of arable lands during the late and post-LIA eras.
Space Pomology: Dwarf Plums for Fresh Food Production
Recently, USDA ARS researchers genetically modified plums for rapid breeding work and noticed the plants could flower and develop fruit rapidly on relatively small plants. We have tested several of these genetically modified (GM) plums in plant chambers to assess their potential as a space crop. We have been able to clone these genetic lines using cuttings that are rooted using growth regulating compounds. Results showed that the GM plums indeed flower and fruit on small plants in controlled environments similar to what might be used in space, but they require cross-pollination with pollen from a standard plum. Analysis of stomatal conductance and leaf transpiration showed that water use went up in the light period, as expected, and but that GM types typically showed higher conductance than a standard plum. Analysis of tissue showed that fruit could be a good source of potassium and phenolic compounds, which could be beneficial as a bone loss countermeasure (Smith et al., 2014). These findings are all promising for using dwarf GM plums as a supplemental food for space, but further horticultural testing is needed before they are ready.
Nature's Notebook Provides Phenology Observations for NASA Juniper Phenology and Pollen Transport Project
Phenology Network has been established to provide national wide observations of vegetation phenology. However, as the Network is still in the early phases of establishment and growth, the density of observers is not yet adequate to sufficiently document the phenology variability over large regions. Hence a combination of satellite data and ground observations can provide optimal information regarding juniperus spp. pollen phenology. MODIS data was to observe Juniperus supp. pollen phenology. The MODIS surface reflectance product provided information on the Juniper supp. cone formation and cone density. Ground based observational records of pollen release timing and quantities were used as verification. Approximately 10, 818 records of juniper phenology for male cone formation Juniperus ashei., J. monosperma, J. scopulorum, and J. pinchotti were reported by Nature's Notebook observers in 2013 These observations provided valuable information for the analysis of satellite images for developing the pollen concentration masks for input into the PREAM (Pollen REgional Atmospheric Model) pollen transport model. The combination of satellite data and ground observations allowed us to improve our confidence in predicting pollen release and spread, thereby improving asthma and allergy alerts.
Nanocarpets for Trapping Microscopic Particles
Nanocarpets that is, carpets of carbon nanotubes are undergoing development as means of trapping microscopic particles for scientific analysis. Examples of such particles include inorganic particles, pollen, bacteria, and spores. Nanocarpets can be characterized as scaled-down versions of ordinary macroscopic floor carpets, which trap dust and other particulate matter, albeit not purposefully. Nanocarpets can also be characterized as mimicking both the structure and the particle-trapping behavior of ciliated lung epithelia, the carbon nanotubes being analogous to cilia. Carbon nanotubes can easily be chemically functionalized for selective trapping of specific particles of interest. One could, alternatively, use such other three-dimensionally-structured materials as aerogels and activated carbon for the purposeful trapping of microscopic particles. However, nanocarpets offer important advantages over these alternative materials: (1) Nanocarpets are amenable to nonintrusive probing by optical means; and (2) Nanocarpets offer greater surface-to-volume ratios.
A pollen-specific novel calmodulin-binding protein with tetratricopeptide repeats
Calcium is essential for pollen germination and pollen tube growth. A large body of information has established a link between elevation of cytosolic Ca(2+) at the pollen tube tip and its growth. Since the action of Ca(2+) is primarily mediated by Ca(2+)-binding proteins such as calmodulin (CaM), identification of CaM-binding proteins in pollen should provide insights into the mechanisms by which Ca(2+) regulates pollen germination and tube growth. In this study, a CaM-binding protein from maize pollen (maize pollen calmodulin-binding protein, MPCBP) was isolated in a protein-protein interaction-based screening using (35)S-labeled CaM as a probe. MPCBP has a molecular mass of about 72 kDa and contains three tetratricopeptide repeats (TPR) suggesting that it is a member of the TPR family of proteins. MPCBP protein shares a high sequence identity with two hypothetical TPR-containing proteins from Arabidopsis. Using gel overlay assays and CaM-Sepharose binding, we show that the bacterially expressed MPCBP binds to bovine CaM and three CaM isoforms from Arabidopsis in a Ca(2+)-dependent manner. To map the CaM-binding domain several truncated versions of the MPCBP were expressed in bacteria and tested for their ability to bind CaM. Based on these studies, the CaM-binding domain was mapped to an 18-amino acid stretch between the first and second TPR regions. Gel and fluorescence shift assays performed with CaM and a CaM-binding synthetic peptide further confirmed MPCBP binding to CaM. Western, Northern, and reverse transcriptase-polymerase chain reaction analysis have shown that MPCBP expression is specific to pollen. MPCBP was detected in both soluble and microsomal proteins. Immunoblots showed the presence of MPCBP in mature and germinating pollen. Pollen-specific expression of MPCBP, its CaM-binding properties, and the presence of TPR motifs suggest a role for this protein in Ca(2+)-regulated events during pollen germination and growth.
The Little Ice Age and Human-Environmental Interactions in the Central Balkans: Insights from a New Serbian Paleorecord
This paper presents a 600-year well-dated, high-resolution Central Balkan paleo-record including the Little Ice Age (LIA; 1450-850 CE). Utilizing pollen-based REVEALS modelling estimates, geochemical indicators, rarefaction analyses and the AMS 14C-based Bacon age model, this first-hand record from the Sava Basin reveals the transformation of the Central Balkan landscape involving linkages between changing climatic and socio-political regimes. The pre-LIA interval (1370-1418 CE) in the Sava Region reveals a wooded steppe and increased cultivation under warmer/stable climatic and socio-political conditions. In contrast, the LIA interval in the region is expressed through continuous transitions between forest and grassland, extensive land erosion and stressed agriculture, potentially as a collective artifact of the climatic variability and human impact associated with socio- political stressors of the time. The post-LIA/Industrial Era interval (1850-2012 CE) in the Sava Region shows an overall increase in woodland as well as agriculture following the exit of the Ottomans. However, increased population pressures and the subsequent onset of the Industrial Revolution as well as increased trade led to intense deforestation throughout the 20th Century, which continued during the Socialist period.
Developmental regulation of the gene for chimeric calcium/calmodulin-dependent protein kinase in anthers
Chimeric Ca(2+)/calmodulin-dependent protein kinase (CCaMK) was cloned from developing anthers of lily (Lilium longiflorum Thumb. cv. Nellie White) and tobacco (Nicotiana tabacum L. cv. Xanthi). Previous biochemical characterization and structure/function studies had revealed that CCaMK has dual modes of regulation by Ca(2+) and Ca(2+)/calmodulin. The unique structural features of CCaMK include a catalytic domain, a calmodulin-binding domain, and a neural visinin-like Ca(2+)-binding domain. The existence of these three features in a single polypeptide distinguishes it from other kinases. Western analysis revealed that CCaMK is expressed in a stage-specific manner in developing anthers. Expression of CCaMK was first detected in pollen mother cells and continued to increase, reaching a peak around the tetrad stage of meiosis. Following microsporogenesis, CCaMK expression rapidly decreased and at later stages of microspore development, no expression was detected. A tobacco genomic clone of CCaMK was isolated and transgenic tobacco plants were produced carrying the CCaMK promoter fused to the beta-glucuronidase reporter gene. Both CCaMK mRNA and protein were detected in the pollen sac and their localizations were restricted to the pollen mother cells and tapetal cells. Consistent results showing a stage-specific expression pattern were obtained by beta-glucuronidase analysis, in-situ hybridization and immunolocalization. The stage- and tissue-specific appearance of CCaMK in anthers suggests that it could play a role in sensing transient changes in free Ca(2+) concentration in target cells, thereby controlling developmental events in the anther.
Plant reproduction in spaceflight environments
Because plant reproduction is a complex developmental process there are many possible sites of perturbation by the unusual environments of orbital spacecraft. Previous long-duration experiments on Soviet platforms shared features of slowed development through the vegetative stage of plant growth and aborted reproductive function. Our goal has been to understand how special features of the spaceflight environment impact physiological function and reproductive development. In a series of short-duration experiments in the Shuttle mid-deck we studied early reproductive development in Arabidopsis thaliana. Pollen and ovule development aborted at an early stage in the first experiment on STS-54 which utilized closed plant growth chambers. Post-flight analysis suggested that the plants may have been carbon dioxide limited. Subsequent experiments utilized carbon dioxide enrichment (on STS-51) and cabin air flow-through with an air exchange system (on STS-68). Both modifications allowed pollen and ovule development to occur normally on orbit, and full reproductive development up to the stage of an immature seed occurred on STS-68. However, analysis of plant roots from these experiments demonstrated a limitation in rootzone aeration in the spaceflight material that was not mitigated by these procedures. In the future, additional resources (crew time, upgraded flight hardware, and special platforms) will invite more elaborate, long-duration experimentation. On the ISS, a variable speed centrifuge and upgraded plant habitats will permit detailed experiments on the role of gravity in shaping the plant micro-environment, and what influence this plays during reproduction.
Climate and Anthropogenic Controls on Blue Carbon Sequestration in Hudson River Tidal Marsh, Piermont, New York
Tidal marshes globally are experiencing erosion with sea level rise. In order to adaptively plan for essential marsh preservation, we recognize the importance of the investigation of marsh archives for the perspective they provide toward resilience. Our objective in this study is to examine the relationship of tidal marsh carbon sequestration with both climate change and human impact throughout past centuries and millennia. A Hudson River marsh sediment core spanning the last 2000 years is analyzed for bulk loss on ignition (LOI), bulk density, sedimentation rate, carbon (C) and mineral flux, and x-ray fluorescence (XRF) analysis including lead, copper, titanium and potassium. We compare this record to previously established pollen and spore stratigraphy from the same site, along with an extensive macrofossil based AMS 14C chronology based upon both cores. Carbon accumulation generally follows sediment accumulation rates, which were higher than 200 g C m−2 yr−1 prior to 1500 years ago. Declines in carbon storage rate during the Medieval Warm Period (MWP) are linked to drought, fire, and charcoal, while lesser declines during the Little Ice Age (LIA) are linked to cooling and a shorter growing season. Subsequent human impact with marsh haying practices also led to carbon accumulation rate decline to 100 g C m−2 yr−1. Increases in C sequestration rates in recent decades may be attributable to nitrogen pollution of the estuary, invasive plants, and/or increased flooding, but the lack of mineral sediment threatens their stability. Ecosystem function is declining with the loss of foundational species, and the crisis is deepening for preservation of this habitat. We strongly recommend strategies for minimizing marsh loss.
Optical Scattering Characterization for the Glennan Microsystems Microscale Particulate Classifier
Small sensors that are tolerant to mechanically and thermally harsh environments present the possibility for in-situ particle characterization in propulsion, industrial, and planetary science applications. Under a continuing grant from the Glennan Microsystems Initiative to the Microgravity Fluids Physics Branch of the NASA-Glenn Research Center, a Microscale Particle Classifier (MiPAC) instrument is being developed. The MiPAC instrument will be capable of determining the size distribution of airborne particles from about 1 nm to 30 micrometers, and will provide partial information as to the concentration, charge state, shape, and structure of the particles, while being an order of magnitude smaller in size and lighter in weight than presently commercially available instruments. The portion of the instrument that will characterize the nm-range particles will employ electrical mobility techniques and is being developed under a separate grant to Prof. David Pui of the University of Minnesota. The portion of the instrument that will characterize the micrometer-size particles such as dirt, pollens, spores, molds, soot, and combustion aerosols will use light scattering techniques. The development of data analysis techniques to be employed in the light scattering portion of the instrument is covered by this grant.
Analysis and expression of the alpha-expansin and beta-expansin gene families in maize
Expansins comprise a multigene family of proteins in maize (Zea mays). We isolated and characterized 13 different maize expansin cDNAs, five of which are alpha-expansins and eight of which are beta-expansins. This paper presents an analysis of these 13 expansins, as well as an expression analysis by northern blotting with materials from young and mature maize plants. Some expansins were expressed in restricted regions, such as the beta-expansins ExpB1 (specifically expressed in maize pollen) and ExpB4 (expressed principally in young husks). Other expansins such as alpha-expansin Exp1 and beta-expansin ExpB2 were expressed in several organs. The expression of yet a third group was not detected in the selected organs and tissues. An analysis of expansin sequences from the maize expressed sequence tag collection is also presented. Our results indicate that expansin genes may have general, overlapping expression in some instances, whereas in other cases the expression may be highly specific and limited to a single organ or cell type. In contrast to the situation in Arabidopsis, beta-expansins in maize seem to be more numerous and more highly expressed than are alpha-expansins. The results support the concept that beta-expansins multiplied and evolved special functions in the grasses.
Late Holocene Environmental Changes from NY-NJ Estuaries
High-resolution records of environmental change in the lower Hudson estuary are quite rare. We present preliminary data from several marshes in the New York- New Jersey region in order to understand the late Holocene environmental history of this region. Our project includes salt marsh cores from Hackensack, Piermont, Staten Island, and Jamaica Bay. Our preliminary research has focused on a 11.15 m sediment core from Piermont Marsh, New York (40 deg N, 74 deg W) in an attempt to document the Holocene environmental history of the region. Lithology, loss -on -ignition (LOI), pollen, plant macrofossils, charcoal, and foraminifera were analyzed. Core lithology consists of peat, silts, and clays that vary in color and texture. The base of the core is AMS C-14 dated to 4190 yr BP. Preliminary low-resolution analysis of the core to date includes sampling at the 1-meter interval throughout the core. LOI of the sediments ranges from 1% to 85%. Average rate of deposition is about .26 cm/yr. Major changes in pollen percentages are visible throughout the core.
Late Holocene Environmental Changes from NY-NJ Estuaries
High-resolution records of environmental change in the lower Hudson estuary are quite rare. We present preliminary data from several marshes in the New York- New Jersey region in order to understand the late Holocene environmental history of this region. Our project includes salt marsh cores from Hackensack, Piermont, Staten Island, and Jamaica Bay. Our preliminary research has focused on a 11.15 m. sediment core from Piermont Marsh, New York (40 N, 74 W) in an attempt to document the Holocene environmental history of the region. Lithology, loss-on-ignition (LOI), pollen, plant macrofossils, charcoal, and foraminifera were analyzed. Core lithology consists of peat, silts, and clays that vary in color and texture. The base of the core is AMS C-14 dated to 4190 yr BP. Preliminary low-resolution analysis of the core to date includes sampling at the 1-meter interval throughout the core. LOI of the sediments ranges from 1% to 85%. Average rate of deposition is about .26 cm/yr. Major changes in pollen percentages are visible throughout the core.
The Hollow Spheres of the Orgueil Meteorite: A Re-Examination
In 1971, Rossignol-Strick and Barghoorn provided images and a description of a number of spherical hollow microstructures showing well-defined walls in acid macerated extract of the Orgueil CI carbonaceous meteorite. Other forms such as membranes and spiral shaped structures were also reported. The carbon-rich (kerogen) hollow spheres were found to be in a narrowly constrained distribution of sizes (mainly 7 to 10 microns in diameter). Electron microprobe analysis revealed that these spheres contained Carbon, possibly P, N, and K. It was established that these forms could not be attributed to pollen or other recent terrestrial contaminants. It was concluded that they most probably represented organic coatings on globules of glass, olivine or magnetite in the meteorite. However, recent studies of the Orgueil meteorite have been carried out at the NASA/Marshall Space Flight Center with the S-4000 Hitachi Field Emission Scanning Electron Microscope (FESEM). These investigations have revealed the presence of numerous carbon encrusted spherical magnetite platelets and spherical and ovoidal bodies of elemental iron in-situ in freshly fractured interior surfaces of the meteorite. Their size range is also very narrowly constrained (typically approximately 6 to 12 microns) in diameter. High resolution images reveal that these bodies are also encrusted with a thin carbonaceous sheath and are surrounded by short nanofibrils that are shown to be composed of high purity iron by EDAX elemental analysis. We present Secondary and Backscatter Electron FESEM images and associated EDAX elemental analyses and 2D X-ray maps of these forms as we re-examine the hollow spheres of Orgueil and attempt to determine if they are representatives of the same population of indigenous microstructures.
Juniper Pollen Hotspots in the Southwest
Rationale: Juniperus pollen is a major allergen in Texas, Oklahoma, and New Mexico. While the bulk of pollen may be released in rural areas, large amounts of pollen can be transported to urban areas. Major juniper species in the region include: Juniperus ashei, J. virginiana, J. pinchotii, and J. monosperma. Pollen release is virtually continuous beginning in late September with J. pinchotii and ending in May with J. monosperma. Urban areas in the region were evaluated for the potential of overlapping seasons in order to inform sensitive individuals. Methods: Burkard volumetric pollen traps were established for two consecutive spring seasons at 6 sites in northern New Mexico and 6 sites for two consecutive winter and fall seasons in Texas and Oklahoma Standard methods were used in the preparation and analysis of slides. Results: The Dallas-Fort Worth Metroplex is home to over 6 million people. It is adjacent to populations of J. pinchotii, J. virginiana, and J. ashei. Peak concentration near Dallas for J. ashei in 2011 was 5891 pollen grains/m3 in January 7th. The peak date for J. pinchotii at an upwind sampling location in San Marcos, TX was November 1, 2010 and peak for J. virginiana at a nearby station in Tulsa, OK was November 1, 2010 and peak for J. virginiana at a nearby station in Tulsa, OK was February 20, 2011. Amarillo, TX is adjacent to J. pinchotii, J. ashei, and J. monosperma populations and may be subject to juniper pollen from September through May. Conclusions: Considering the overlapping distributions of juniper trees and the overlapping temporal release of pollen, sensitive patients may benefit from avoiding hotspots.
Marsh Archive Reveals Human Population History and Future Implications for Estuarine Health in Long Island Sound
Coastal marshes are efficient ecosystems providing a multitude of benefits for invertebrates, birds, fish and humans alike. Yet despite these benefits, wetlands are threatened by anthropogenic inputs such as human wastewater which contain high levels of nitrogen (N). Increased nitrogen loads cause eutrophication and hypoxia in estuaries leading to further degradation of these valuable ecosystems that are already stressed by sea level rise and climate change. Policies to protect wetlands via wastewater treatments are reactive rather than proactive and a growing body of research shows that characteristics associated with population health and economic activity can be identified in wastewater. Analysis of a 2-m salt marsh sediment core reveals δN15 signatures indicative of human population rise and connects human impact to ecosystem health. Using key X-ray fluorescence (XRF), pollen, sediment and nitrogen signatures along the core, a robust chronology was produced dating back to 1700. This result was coupled with population data to observe the relationship between δN15 levels and population over three centuries. There is a statistically significant positive correlation between δN15 and population. Other external factors such as federal government policies (regulating clean water) show a clear reduction in this association but the use of synthetic nitrogen fertilizer masks the strength of this relationship. Further research to refine the relationship between population and δN15 could be beneficial in predicting nitrogen loads as human population grows, which in turn would create a proactive system to protect our coastal ecosystems.