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At least 19 records

FY21 Proxy App Suite Release: Report for ECP Proxy App Project Milestone ADCD504-12

The FY21 Proxy App Suite Release milestone includes the following activities: Curate a collection of proxy applications that represents the breadth of ECP applications, including application domains, programming models, supporting libraries, numerical methods, etc. Identify gaps in coverage and work with application teams to commission or develop proxies to cover gaps. From within this collection, designate the "ECP Proxy Application Suite" of 12-15 proxies that balance breadth of coverage with ease of use and quality of implementation. Also designate approximately 8-10 proxies to form the \ECP Machine Learning Proxy Suite". The ML suite will represent algorithms, use cases, and programming methods typically used by ECP science workloads to incorporate machine learning into their workflows.

97 MATHEMATICS AND COMPUTING↗

Quantitative Performance Assessment of Proxy Apps and Parents (Report for ECP Proxy App Project Milestone ADCD-504-11)

The ECP Proxy Application Project has an annual milestone to assess the state of ECP proxy applications. Our FY21 milestone (ADCD-504-11) proposed to: "Assess the performance and fidelity of proxy applications, including those in the ECP Proxy App Suite, relative to the ECP Application workload on heterogeneous platforms. Use proxy applications and selected ECP applications to assess the utility of critical elements of the Exascale toolchain, especially tools used to collect performance data. Identify gaps in coverage and/or common situations in which proxies may fail to adequately represent ECP applications." To satisfy this milestone, the following specific tasks were completed: Study ability of MACSio to represent I/O workloads of adaptive mesh codes; Prepare report on assessed performance and debugging tools; Perform cosine similarity study on Intel and P9 and submit paper; Complete LDMS/GPU subcontract, complete and receive report; Complete validation of LDMS data collection for GPUs and submit paper; and Perform cosine similarity study on GPUs.

97 MATHEMATICS AND COMPUTING↗

Quantitative Performance Assessment of Proxy Apps and Parents (Report for ECP Proxy App Project Milestone ADCD-504-28)

The ECP Proxy Application Project has an annual milestone to assess the state of ECP proxy applications and their role in the overall ECP ecosystem. Our FY22 March/April milestone (ADCD- 504-28) proposed to: Assess the fidelity of proxy applications compared to their respective parents in terms of kernel and I/O behavior, and predictability. Similarity techniques will be applied for quantitative comparison of proxy/parent kernel behavior. MACSio evaluation will continue and support for OpenPMD backends will be explored. The execution time predictability of proxy apps with respect to their parents will be explored through a carefully designed scaling study and code comparisons. Note that in this FY, we also have quantitative assessment milestones that are due in September and are, therefore, not included in the description above or in this report. Another report on these deliverables will be generated and submitted upon completion of these milestones. To satisfy this milestone, the following specific tasks were completed: Study the ability of MACSio to represent I/O workloads of adaptive mesh codes. Re-define the performance counter groups for contemporary Intel and IBM platforms to better match specific hardware components and to better align across platforms (make cross-platform comparison more accurate). Perform cosine similarity study based on the new performance counter groups on the Intel and IBM P9 platforms. Perform detailed analysis of performance counter data to accurately average and align the data to maintain phases across all executions and develop methods to reduce the set of collected performance counters used in cosine similarity analysis. Apply a quantitative similarity comparison between proxy and parent CPU kernels. Perform scaling studies to understand the accuracy of predictability of the parent performance using its respective proxy application. This report presents highlights of these efforts.

97 MATHEMATICS AND COMPUTING↗

4D Proxy Imaging of Fracture Dilation and Stress Shadowing Using Electrical Resistivity Tomography During High Pressure Injections into a Dense Rock Formation

Fluid flow through fractured rock systems is governed in large part by the distribution, interconnectivity, and size of fracture apertures. In-situ stress is one of the primary factors controlling fracture aperture, and one that is altered significantly during high-pressure fluid injections or extractions. Interactions between stress, pore pressure, aperture, and fluid flow can result in complex and evolving poroelastic behavior with significant implications regarding the predictability and risk of developing and managing deep subsurface reservoirs (geothermal, fossil energy, and geologic carbon sequestration). In saturated crystalline rocks, bulk electrical conductivity is highly sensitive to porosity, and therefore to fracture aperture size and distribution. We demonstrate the use of time-lapse 3D electrical resistivity tomography for remotely monitoring stress induced changes in aperture distribution during high pressure injections into a fractured rock system at a scale of tens of meters. Results reveal a complex and continuously evolving stress field involving aperture dilations in the natural fracture system and aperture contractions in adjacent zones of shadow stress. Results provide information about the spatiotemporal changes in the system behavior and point to the potential of electrical imaging for autonomously and remotely monitoring evolving stress conditions by proxy through changes in bulk electrical conductivity.

electrical resisitivity tomography, stress, 4D Tim↗

Investigation of several proxies to estimate sulfuric acid concentration in volcanic plume conditions

Sulfuric acid (H2SO4) is commonly accepted as a key precursor for atmospheric new particle formation (NPF). However, direct measurements of [H2SO4] remain challenging, thus preventing the determination of this important quantity, and, consequently, a complete understanding of its contribution to the NPF process. Several proxies have been developed to bridge the gaps, but their ability to predict [H2SO4] in very specific conditions such as those encountered in volcanic plumes (including in particular high sulphur dioxide mixing ratios) has not been evaluated so far. In this context, the main objective of the present study was to develop new proxies for daytime [H2SO4] in volcanic plume conditions and compare their performance to that of the proxies available in the literature. In specific, the data collected at Maïdo during the OCTAVE 2018 campaign, in the volcanic eruption plume of the Piton de la Fournaise, were first used to derive seven proxies based on the knowledge of sulphur dioxide (SO2) mixing ratio, global radiation, condensation sink (CS) and relative humidity (RH). In three of the seven proxies (F1–F3), all variables were given equal weight in the prediction of [H2SO4], while adjusted powers were allowed for the different variables in the other four proxies (A1–A4). Proxies A1–A4 were overall found to perform better compared to F1–F3, with, in specific, improved predictive ability for [H2SO4] > 2 × 108 per cu.cm. The CS was observed to play an important role in regulating [H2SO4], while, in contrast, the inclusion of RH did not improve the predictions. A last expression accounting for an additional sink term related to cluster formation, S1, was also tested and showed a very good predictive ability over the whole range of measured [H2SO4]. The newly developed proxies were in a second step further evaluated using airborne measurements performed in the passive degassing plume of Etna during the STRAP 2016 campaign. Increased correlations between observed and predicted [H2SO4] were obtained when the dependence of predicted [H2SO4] over CS was the lowest, and when the dependence over [SO2] was concurrently the highest. The best predictions were finally retrieved by the simple formulation of F2 (in which [SO2] and radiation alone were assumed to explain the variations of [H2SO4] with equal contributions), with a pre factor adapted to the STRAP data. All in all, our results illustrate the fairly good capacity of the proxy available in the literature to describe [H2SO4] in volcanic plume conditions, but highlight at the same time the benefit of the newly developed proxies for the prediction of the highest concentrations ([H2SO4] > 2–3 × 108 per cu.cm). Also, the contrasting behaviours of the new proxies in the two investigated datasets indicate that in volcanic plumes like in other environments, the relevance of a proxy can be affected by changes in environmental conditions, and that location specific coefficients do logically improve the predictions.

new particle formation↗

Comparing Proxy and Model Estimates of Hydroclimate Variability and Change over the Common Era

Water availability is fundamental to societies and ecosystems, but our understanding of variations in hydroclimate (including extreme events, flooding, and decadal periods of drought) is limited because of a paucity of modern instrumental observations that are distributed unevenly across the globe and only span parts of the 20th and 21st centuries. Such data coverage is insufficient for characterizing hydroclimate and its associated dynamics because of its multidecadal to centennial variability and highly regionalized spatial signature. High-resolution (seasonal to decadal) hydroclimatic proxies that span all or parts of the Common Era (CE) and paleoclimate simulations from climate models are therefore important tools for augmenting our understanding of hydroclimate variability. In particular, the comparison of the two sources of information is critical for addressing the uncertainties and limitations of both while enriching each of their interpretations. We review the principal proxy data available for hydroclimatic reconstructions over the CE and highlight the contemporary understanding of how these proxies are interpreted as hydroclimate indicators. We also review the available last-millennium simulations from fully coupled climate models and discuss several outstanding challenges associated with simulating hydroclimate variability and change over the CE. A specific review of simulated hydroclimatic changes forced by volcanic events is provided, as is a discussion of expected improvements in estimated radiative forcings, models, and their implementation in the future. Our review of hydroclimatic proxies and last-millennium model simulations is used as the basis for articulating a variety of considerations and best practices for how to perform proxy-model comparisons of CE hydroclimate. This discussion provides a framework for how best to evaluate hydroclimate variability and its associated dynamics using these comparisons and how they can better inform interpretations of both proxy data and model simulations.We subsequently explore means of using proxy-model comparisons to better constrain and characterize future hydroclimate risks. This is explored specifically in the context of several examples that demonstrate how proxy-model comparisons can be used to quantitatively constrain future hydroclimatic risks as estimated from climate model projections.

Common Era↗

FY22 Proxy App Suite Release

The FY22 Proxy App Suite Release milestone includes the following activities: Curate a collection of proxy applications that represents the breadth of ECP applications, including application domains, programming models, supporting libraries, numerical methods, etc. Identify gaps in coverage and work with application teams to commission or develop proxies to cover gaps. From within this collection, designate the ”ECP Proxy Application Suite” of 10–15 proxies that balance breadth of coverage with ease of use and quality of implementation. Also designate approximately 6–10 proxies to form the “ECP Machine Learning Proxy Suite”. The ML suite will represent algorithms, use cases, and programming methods typically used by ECP science workloads to incorporate machine learning into their workflows.

97 MATHEMATICS AND COMPUTING↗

A Taxonomy and Feature set for Server-Side Identification of Proxies

Malicious actors frequently use proxies and VPNs to evade detection and hide their origin. Current challenges to information security include the use of residential proxies to blend in with normal traffic and Man-in-the-Middle phishing proxies that are used to compromise accounts protected with mult-factor authentication. We advance a taxonomy and feature set for the identification of proxied traffic based on the network layer where proxying occurs. We describe how these features apply to common proxy types and how to use these features in the classification of the proxied traffic. Collection of these additional features is feasible using existing network sensors and web servers, while only adding about 30% volume to commonly deployed network sensor logs.

97 MATHEMATICS AND COMPUTING↗

Proxy Applications for Converged Workloads: DMC LDRD Initiative

Modern scientific applications are complicated and require coordination of several components. Proxy application driven software-hardware co-design plays a vital role in driving innovation among the developments of applications, software infrastructure and hardware architecture. Proxy applications are self-contained and simplified codes that are intended to model the performance-critical computations within applications. Applications executing on modern High Performance Computing (HPC) systems are susceptible to network congestion, insufficient memory bandwidth within and across compute nodes, and inadvertent loss of performance due to bugs and unoptimized programming models. Modern numerical simulations and machine learning models play a critical role in studying physical phenomenon under myriad uncertainties. Such applications often exhibit irregular computation and memory accesses at specific regions of the application code, which can contribute to various performance bottlenecks at scale. To mitigate such issues and prepare the next generation hardware for a variety of computation and data movement contingencies, a well-known practice is to consider "proxy" applications as representative motifs for various classes of scientific applications. While there is disagreement in the HPC community on the mechanisms of construction of the proxy applications, there is a strong consensus on their positive impact in co-design. Proxy Applications for Converged Workloads (PACER) is about facilitating software-hardware co-design through proxy applications with the goal of improving the performance of converged science workflows on heterogeneous systems.

97 MATHEMATICS AND COMPUTING↗

Quantitative Performance Assessment of Proxy Apps and Parents

The ECP Proxy Application Project has an annual milestone to assess the state of ECP proxy applications. Our FY21 milestone (ADCD-504-11) proposed to: Assess the performance and fidelity of proxy applications, including those in the ECP Proxy App Suite, relative to the ECP Application workload on heterogeneous platforms. Use proxy applications and selected ECP applications to assess the utility of critical elements of the Exascale toolchain, especially tools used to collect performance data. Identify gaps in coverage and/or common situations in which proxies may fail to adequately represent ECP applications.

97 MATHEMATICS AND COMPUTING↗

Sulfuric acid in the Amazon basin: measurements and evaluation of existing sulfuric acid proxies

Abstract. Sulfuric acid is a key contributor to new particle formation, though measurements of its gaseous concentrations are difficult to make. Several parameterizations to estimate sulfuric acid exist, all of which were constructed using measurements from the Northern Hemisphere. In this work, we report the first measurements of sulfuric acid from the Amazon basin. These measurements are consistent with concentrations measured in Hyytiälä, Finland, though, unlike Hyytiälä, there is no clear correlation of sulfuric acid with global radiation. There was a minimal difference in sulfuric acid observed between the wet and dry seasons in the Amazon basin. We also test the efficacy of existing proxies to estimate sulfuric acid in this region. Our results suggest that nighttime sulfuric acid production is due to both a stabilized Criegee intermediate pathway and oxidation of SO2 by OH, the latter of which is not currently accounted for in existing proxies. These results also illustrate the drawbacks of the common substitution of radiation for OH concentrations. None of the tested proxies effectively estimate sulfuric acid measurements at night. For estimates at all times of day, a recently published proxy based on data from the boreal forest should be used. If only daytime estimates are needed, several recent proxies that do not include the Criegee pathway are sufficient. More investigation of nighttime sulfuric acid production pathways is necessary to close the gap between measurements and estimates with existing proxies.

54 ENVIRONMENTAL SCIENCES↗

Historic Global Biomass Burning Emissions for CMIP6 (BB4CMIP) Based on Merging Satellite Observations with Proxies and Fire Models (1750-2015)

Fires have influenced atmospheric composition and climate since the rise of vascular plants, and satellite data has shown the overall global extent of fires. Our knowledge of historic fire emissions has progressively improved over the past decades due mostly to the development of new proxies and the improvement of fire models. Currently there is a suite of proxies including sedimentary charcoal records, measurements of fire-emitted trace gases and black carbon stored in ice and firn, and visibility observations. These proxies provide opportunities to extrapolate emissions estimates based on satellite data starting in 1997, but each proxy has strengths and weaknesses regarding, for example, the spatial and temporal extents over which they are representative. We developed a new historic biomass burning emissions dataset starting in 1750 that merges the satellite record with several existing proxies, and uses the average of six models from the Fire Model Intercomparison Project (FireMIP) protocol to estimate emissions when the available proxies had limited coverage. According to our approach, global biomass burning emissions were relatively constant with 10-year averages varying between 1.8 and 2.3 petagrams of carbon per year. Carbon emissions increased only slightly over the full time period and peaked during the 1990's after which they decreased gradually. There is substantial uncertainty in these estimates and patterns varied depending on choices regarding data representation, especially on regional scales. The observed pattern in fire carbon emissions is for a large part driven by African fires, which accounted for 58 percent of global fire carbon emissions. African fire emissions declined since about 1950 due to conversion of savanna to cropland, and this decrease is partially compensated for by increasing emissions in deforestation zones of South America and Asia. These global fire emissions estimates are mostly suited for global analyses and will be used in the Coupled Model Intercomparison Project Phase 6 (CMIP6) simulations.

Biomass burning; Satellite observations; computer ↗

Statistical Uncertainty in Paleoclimate Proxy Reconstructions

A quantitative analysis of any environment older than the instrumental record relies on proxies. Uncertainties associated with proxy reconstructions are often underestimated, which can lead to artificial conflict between different proxies, and between data and models. In this paper, using ordinary least squares linear regression as a common example, we describe a simple, robust and generalizable method for quantifying uncertainty in proxy reconstructions. We highlight the primary controls on the magnitude of uncertainty, and compare this simple estimate to equivalent estimates from Bayesian, nonparametric and fiducial statistical frameworks. We discuss when it may be possible to reduce uncertainties, and conclude that the unexplained variance in the calibration must always feature in the uncertainty in the reconstruction. This directs future research toward explaining as much of the variance in the calibration data as possible. We also advocate for a “data-forward” approach, that clearly decouples the presentation of proxy data from plausible environmental inferences.

58 GEOSCIENCES↗

Validation of Spacecraft Active Cavity Radiometer Total Solar Irradiance (TSI) Long Term Measurement Trends Using Proxy TSI Least Squares Analyses

Long-term, incoming total solar irradiance (TSI) measurement trends were validated using proxy TSI values, derived from indices of solar magnetic activity. Spacecraft active cavity radiometers (ACR) are being used to measure longterm TSI variability, which may trigger global climate changes. The TSI, typically referred to as the solar constant, was normalized to the mean earth-sun distance. Studies of spacecraft TSI data sets confirmed the existence of a 0.1 %, long-term TSI variability component within a 10-year period. The 0.1% TSI variability component is clearly present in the spacecraft data sets from the 1984-2004 time frame. Typically, three overlapping spacecraft data sets were used to validate long-term TSI variability trends. However, during the years of 1978-1984, 1989-1991, and 1993-1996, three overlapping spacecraft data sets were not available in order to validate TSI trends. The TSI was found to vary with indices of solar magnetic activity associated with recent 10-year sunspot cycles. Proxy TSI values were derived from least squares analyses of the measured TSI variability with the solar indices of 10.7-cm solar fluxes, and with limb-darked sunspot fluxes. The resulting proxy TSI values were compared to the spacecraft ACR measurements of TSI variability to detect ACR instrument degradation, which may be interpreted as TSI variability. Analyses of ACR measurements and TSI proxies are presented primarily for the 1984-2004, Earth Radiation Budget Experiment (ERBE) ACR solar monitor data set. Differences in proxy and spacecraft measurement data sets suggest the existence of another TSI variability component with an amplitude greater than or equal to 0.5 Wm-2 (0.04%), and with a cycle of 20 years or more.

Lee, Robert Benjamin, III↗

Digital Proxy Simulation of Robotic Hardware

A computer-implemented method, computer program product, and computing system is provided for a digital proxy simulation of robotic hardware. In an implementation, a method may include creating a digital proxy simulation for a robotic hardware wherein the digital simulation and the robotic hardware may share a network interface. a user may be provided with an option to switch between the robotic hardware and the digital proxy simulation. The switch may be executed, upon receiving a user selection, between the robotic hardware and the digital proxy simulation, wherein executing the switch includes transferring input and output signals between the digital proxy simulation and the robotic hardware.

Bacon, James A.↗

Modeling pre-Exascale AMR Parallel I/O Workloads via Proxy Applications

The present work investigates the modeling of preexascale input/output (I/O) workloads of Adaptive Mesh Refinement (AMR) simulations through a simple proxy application. We collect data from the AMReX Castro framework running on the Summit supercomputer for a wide range of scales and mesh partitions for the hydrodynamic Sedov case as a baseline to provide sufficient coverage to the formulated proxy model. The non-linear analysis data production rates are quantified as a function of a set of input parameters such as output frequency, grid size, number of levels, and the Courant-Friedrichs-Lewy (CFL) condition number for each rank, mesh level and simulation time step. Linear regression is then applied to formulate a simple analytical model which allows to translate AMReX inputs into MACSio proxy I/O application parameters, resulting in a simple “kernel” approximation for data production at each time step. Results show that MACSio can simulate actual AMReX nonlinear “static” I/O workloads to a certain degree of confidence on the Summit supercomputer using the present methodology. The goal is to provide an initial level of understanding of AMR I/O workloads via lightweight proxy applications models to facilitate autotune data management strategies in anticipation of exascale systems.

Godoy, William↗

Temperature uncertainty modelling with proxy structural data as geostatistical constraints for well siting: an example applied to Granite Springs Valley, NV, USA

Utilizing existing temperature and structural geology information around Granite Springs Valley, Nevada, we build 3D stochastic temperature models with the aims of evaluating the 3D uncertainty of temperature and choosing between candidate exploration well locations. The data used to support the modelling are measured temperatures and structural proxies from 3D geologic modelling (distance to fault, distance to fault intersections and terminations, Coulomb stress change and dilation tendency), the latter considered ‘secondary’ data. Two stochastic geostatistical techniques are explored for incorporating the structural proxies: cosimulation and local varying mean. With both the cosimulation and local varying mean methods, many equally-likely temperature models (i.e. realizations) are produced, from which temperature probability profiles are calculated at candidate well locations. To aid in choosing between the candidate locations, two quantities summarize the temperature probabilities: V prior and entropy. V prior quantifies the likelihood for economic temperatures at each candidate location, whereas entropy identifies where new information has the most potential to reduce uncertainty. In general, the cosimulation realizations have smoother spatial structure, and extrapolate high temperatures at candidate locations that are located along the direction of the longest spatial correlation, which are down dip from existing temperature logs. The smooth realizations result in tight temperature probability profiles that are easier to interpret, but they have unrealistic temperature reversals in some locations because of the dipping ellipsoid shape created and that the cosimulation technique does not enforce a conductive geothermal gradient as a baseline (i.e. linearly increasing temperature with depth). The local varying mean results produce realizations with more realistic geothermal gradients, with temperatures increasing downward since a depth-temperature relationship is included. However, because they have much noisier spatial nature compared to cosimulation, it is harder to interpret the temperature probability profiles. The different local varying mean results allow the geologist to determine which proxy (e.g. dilation v. distance to fault termination) should be used given the specific geothermal system. In general, V prior from local varying mean results identify locations that are close to high values for the structural proxies: areas with higher probabilities for higher temperatures. The entropy results identify where uncertainty is greatest and therefore new drilling information could be most useful. Though these techniques provide useful information, even when applied to areas of sparse data, our comparison of these two techniques demonstrates the need for new geothermal geostatistics techniques that combine the advantages of these two methods and that are tailored to the spatial uncertainty issues inherent in geothermal exploration.

15 GEOTHERMAL ENERGY↗

JMS Proxy and C/C++ Client SDK

JMS Proxy and C/C++ Client SDK (JMS signifies "Java messaging service" and "SDK" signifies "software development kit") is a software package for developing interfaces that enable legacy programs (here denoted "clients") written in the C and C++ languages to communicate with each other via a JMS broker. This package consists of two main components: the JMS proxy server component and the client C library SDK component. The JMS proxy server component implements a native Java process that receives and responds to requests from clients. This component can run on any computer that supports Java and a JMS client. The client C library SDK component is used to develop a JMS client program running in each affected C or C++ environment, without need for running a Java virtual machine in the affected computer. A C client program developed by use of this SDK has most of the quality-of-service characteristics of standard Java-based client programs, including the following: Durable subscriptions; Asynchronous message receipt; Such standard JMS message qualities as "TimeToLive," "Message Properties," and "DeliveryMode" (as the quoted terms are defined in previously published JMS documentation); and Automatic reconnection of a JMS proxy to a restarted JMS broker.

Wolgast, Paul↗