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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 19 records
All sourcesNASA NTRSDOE OSTI
DOE OSTI2021

Structure Perception in 3D Point Clouds

Understanding human perception is critical to the design of effective visualizations. The relative benefits of using 2D versus 3D techniques for data visualization is a complex decision space, with varying levels of uncertainty and disagreement in both the literature and in practice. This study aims to add easily reproducible, empirical evidence on the role of depth cues in perceiving structures or patterns in 3D point clouds. We describe a method to synthesize a 3D point cloud that contains a 3D structure, where 2D projections of the data strongly resemble a Gaussian distribution. We performed a within-subjects structure identification study with 128 participants that compared scatterplot matrices (canonical 2D projections) and 3D scatterplots under three types of motion: rotation, xy-translation, and z-translation. We found that users could consistently identify three separate hidden structures under rotation, while those structures remained hidden in the scatterplot matrices and under translation. This work contributes a set of 3D point clouds that provide definitive examples of 3D patterns perceptible in 3D scatterplots under rotation but imperceptible in 2D scatterplots.

data analysis↗
DOE OSTI2021

Structure Perception in 3D Point Clouds: Preprint

Understanding human perception is critical to the design of ef- fective visualizations. The relative benefits of using 2D versus 3D techniques for data visualization is a complex decision space, with varying levels of uncertainty and disagreement in both the liter- ature and in practice. This study aims to add easily reproducible, empirical evidence on the role of depth cues in perceiving structures or patterns in 3D point clouds. We describe a method to synthesize a 3D point cloud that contains a 3D structure, where 2D projec- tions of the data strongly resemble a Gaussian distribution. We performed a within-subjects structure identification study with 128 participants that compared scatterplot matrices (canonical 2D projections) and 3D scatterplots under three types of motion: rota- tion, xy-translation, and z-translation. We found that users could consistently identify three separate hidden structures under ro- tation, while those structures remained hidden in the scatterplot matrices and under translation. This work contributes a set of 3D point clouds that provide definitive examples of 3D patterns per- ceptible in 3D scatterplots under rotation but imperceptible in 2D scatterplots.

data analysis↗
DOE OSTI2023

A multiscale landscape approach for prioritizing river and stream protection and restoration actions

River and stream conservation programs have historically focused on a single spatial scale, for example, a watershed or stream site. Recently, the use of landscape information (e.g., land use and land cover) at multiple spatial scales and over large spatial extents has highlighted the importance of incorporating a landscape perspective into stream protection and restoration activities. Previously, we developed a novel framework that links information about watershed-, catchment-, and reach-scale integrity with stream biological condition using scatterplots and a landscape integrity map. Here we examined an application of this approach for streams in urban and other settings in King County, Washington State, United States, where we related stream macroinvertebrate condition to two indices of landscape integrity, the US Environmental Protection Agency's (USEPA) nationally available Index of Watershed Integrity (IWI) and Index of Catchment Integrity (ICI). We generated a scatterplot of IWI versus ICI for sample sites, where points represented site macroinvertebrate condition from poor to good. The same data were also visualized as a landscape integrity map that displayed catchments of King County according to the level of watershed and catchment integrity (high or low IWI/ICI). Almost three-quarters of poor-condition sites were associated with high-integrity watersheds and catchments (i.e., underperforming sites), which suggested that either one or both national indicators were insufficient for this area, and that sites underperformed because of local-scale factors. In response, we used a catchment-scale indicator related to forest condition (PctForestCat) after examining several GIS-based dispersal indicators from the National Hydrography Dataset and other candidates from the USEPA's StreamCat dataset. We then compared the results of the scatterplots and maps based on the current and original analyses and found that many of the sites previously classified as underperforming now performed as expected, that is, they were poor-condition sites in poor-condition catchments. This analysis demonstrates how results based on a national dataset can be improved by developing an alternative that represents regionally important stressors. The methods used to develop an effective landscape indicator based on StreamCat datasets, and the utility of the multiscale approach, could provide important tools for prioritizing, optimizing, and communicating stream conservation actions.

54 ENVIRONMENTAL SCIENCES↗
NASA NTRS1995

Evaluation of passive microwave precipitation algorithms in wintertime midlatitude situations

The second intercomparison project of the Global Precipitation Climatology Project (GPCP) examined the estimation of midlatitude, cool-season precipitation. As part of that effort, the authors report here on the results of two microwave techniques, the Goddard scattering algorithm and the physical retrieval algorithm of Kummerow. Results from the estimation of instantaneous rain rate for five overpasses of the Special Sensor Microwave/Imager (SSM/I) are presented in a case study mode to illustrate both the strong and weak points of each technique. These five cases represent a sampling of the various types of precipitating systems observed. Results for the complete set of 20 swaths chosen by the United Kingdom Meteorological Office (UKMO) are then categorized by scatterplots and statistics of instantaneous radar versus microwave-estimated rain rate, rain no-rain contingency tables, and scatterplots of areal coverage of rainfall. Neither algorithm produced a good statistical correlation with the radar data, yet in general, both did well at determining rainy areas. Two reasons are suggested for the low correlation coefficients between both algorithms and the radar data. Time differences between the SSM/I overpass and the radar observations can occasionally account for some of the differences. The primary reason for the low correlations, however, appears to be the predominance of very light rain in the area of interest during the winter. Both algorithms are in good spatial agreement with the radar when the radar data are restricted to rates above 1 mm/h. When all radar rain rates are included, the radar areal coverage increases by as much as a factor of 10 in some cases. Because the Kummerow algorithm does not handle such low rain rates over land very well, and because the Goddard scattering algorithm uses 1 mm/h as the minimum reliably detectable rain rate, regimes that contain large areas of very light rain present inherent difficulties for these retrieval methods. Therefore, the proliferation of low rain rates observed during the experiment is the main contributor to low correlation coefficients and high root-mean-square differences. Mididentification of cold surface (e.g., snow cover) as precipitation was also a problem in several instances.

Negri, Andrew J.↗
NASA NTRS1997

Foreshock Langmuir Waves for Unusually Constant Solar Wind Conditions: Data and Implications for Foreshock Structure

Plasma wave data are compared with ISEE 1's position in the electron foreshock for an interval with unusually constant (but otherwise typical) solar wind magnetic field and plasma characteristics. For this period, temporal variations in the wave characteristics can be confidently separated from sweeping of the spatially varying foreshock back and forth across the spacecraft. The spacecraft's location, particularly the coordinate D(sub f) downstream from the foreshock boundary (often termed DIFF), is calculated by using three shock models and the observed solar wind magnetometer and plasma data. Scatterplots of the wave field versus D(sub f) are used to constrain viable shock models, to investigate the observed scatter in the wave fields at constant D(sub f), and to test the theoretical predictions of linear instability theory. The scatterplots confirm the abrupt onset of the foreshock waves near the upstream boundary, the narrow width in D(sub f) of the region with high fields, and the relatively slow falloff of the fields at large D(sub f), as seen in earlier studies, but with much smaller statistical scatter. The plots also show an offset of the high-field region from the foreshock boundary. It is shown that an adaptive, time-varying shock model with no free parameters, determined by the observed solar wind data and published shock crossings, is viable but that two alternative models are not. Foreshock wave studies can therefore remotely constrain the bow shock's location. The observed scatter in wave field at constant D(sub f) is shown to be real and to correspond to real temporal variations, not to unresolved changes in D(sub f). By comparing the wave data with a linear instability theory based on a published model for the electron beam it is found that the theory can account qualitatively and semiquantitatively for the abrupt onset of the waves near D(sub f) = 0, for the narrow width and offset of the high-field region, and for the decrease in wave intensity with increasing D(sub f). Quantitative differences between observations and theory remain, including large overprediction of the wave fields and the slower than predicted falloff at large D(sub f) of the wave fields. These differences, as well as the unresolved issue of the electron beam speed in the high-field region of the foreshock, are discussed. The intrinsic temporal variability of the wave fields, as well as their overprediction based on homogeneous plasma theory, are indicative of stochastic growth physics, which causes wave growth to be random and varying in sign, rather than secular.

Cairns, Iver H.↗
NASA NTRS2017

Interactive Visualization of High-Dimensional Petascale Ocean Data

We describe an application for interactive visualization of 5 petabytes of time-varying multivariate data from a high-resolution global ocean circulation model. The input data are 10311 hourly (ocean time) time steps of various 2D and 3D fields from a 22-billion point 1/48- degree “lat-lon cap” configuration of the MIT General Circulation Model (MITgcm). We map the global horizontal model domain onto our 128-screen (8x16) tiled display wall to produce a canonical tiling with approximately one MITgcm grid point per display pixel, and using this tiling we encode the entire time series for multiple native and computed scalar quantities at a collection of ocean depths. We reduce disk bandwidth requirements by converting the model’s floating point data to 16-bit fixed point values, and compressing those values with a lossless video encoder, which together allow synchronized playback at 24 time steps per second across all 128 displays. The application allows dynamic assignment of any two encoded tiles to any display, and has multiple interfaces for quickly specifying various orderly arrangements of tiles. All subsequent rendering is done on the fly, with run time control of colormaps, transfer functions, histogram equalization, and labeling. The two data streams on each screen can be rendered independently and combined in various ways, including blending, differencing, horizontal/ vertical wipes, and checkerboarding. The two data streams on any screen can optionally be displayed as a scatterplot in their joint attribute space. All scatterplots and map-view plots from the same x/y location and depth are linked so they all show the current brushable selection. Ocean scientists have used the system, and have found previously unidentified features in the data.

Interactive↗
DOE OSTI2025

Evaluation of normalization strategies for mass spectrometry-based multi-omics datasets

Introduction Data normalization is crucial for multi-omics integration, reducing systematic errors and maximizing the likelihood of discovering true biological variation. Most studies assess normalization for a single omics type or use datasets from separate experiments. Few address time-course data, where normalization might bias temporal differentiation. In this study, we compared common normalization methods and a machine learning approach, Systematical Error Removal using Random Forest (SERRF), using multi-omics datasets generated from the same experiment—even from the same cell lysate. Objectives To develop a straightforward process to assess normalization effects and identify the most robust methods across multi-omics datasets. Methods We analyzed metabolomics, lipidomics, and proteomics datasets from primary human cardiomyocytes and motor neurons exposed to acetylcholine-active compounds over time. Normalization effectiveness was evaluated based on improvement in QC features consistency and observing the change in treatment and time-related variance. Results Probabilistic Quotient Normalization (PQN) and Locally Estimated Scatterplot Smoothing (LOESS) QC were identified as optimal for metabolomics and lipidomics, while PQN, Median, and LOESS normalization excelled for proteomics. These methods consistently enhanced QC feature consistency in metabolomics and lipidomics, and preserved time-related variance or treatment-related variance in proteomics, demonstrating their effectiveness and robustness. SERRF normalization, applied only to metabolomics in this study, outperformed other methods in some datasets but inadvertently masked treatment-related variance in others. Conclusion Our evaluation identified PQN and LoessQC as the top methods for metabolomics and lipidomics, and PQN, Median, and Loess normalization for proteomics, in multi-omics integration in a temporal study.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2024

Toward the validation of crowdsourced experiments for lightness perception

Crowdsource platforms have been used to study a range of perceptual stimuli such as the graphical perception of scatterplots and various aspects of human color perception. Given the lack of control over a crowdsourced participant’s experimental setup, there are valid concerns on the use of crowdsourcing for color studies as the perception of the stimuli is highly dependent on the stimulus presentation. Here, we propose that the error due to a crowdsourced experimental design can be effectively averaged out because the crowdsourced experiment can be accommodated by the Thurstonian model as the convolution of two normal distributions, one that is perceptual in nature and one that captures the error due to variability in stimulus presentation. Based on this, we provide a mathematical estimate for the sample size needed to produce a crowdsourced experiment with the same power as the corresponding in-person study. We tested this claim by replicating a large-scale, crowdsourced study of human lightness perception with a diverse sample with a highly controlled, in-person study with a sample taken from psychology undergraduates. Our claim was supported by the replication of the results from the latter. These findings suggest that, with sufficient sample size, color vision studies may be completed online, giving access to a larger and more representative sample. With this framework at hand, experimentalists have the validation that choosing either many online participants or few in person participants will not sacrifice the impact of their results.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2023

Ectomycorrhizal effects on decomposition are highly dependent on fungal traits, climate, and litter properties: A model-based assessment. Dataset.

To simulate the effects of mycorrhizal fungi on soil organic matter cycling, we incorporated mycorrhizal processes into the Carbon, Organisms, Rhizosphere, and Protection in the Soil Environment (CORPSE) model to develop a new soil model Myco-CORPSE. The new model was calibrated and evaluated against soil measurements taken at temperate forests in New Hampshire (NH) and Georgia (GA). A series of scenario analysis were also conducted to explore the conditions under which ectomycorrhizal (ECM) N acquisition processes can induce different soil C accumulation in ECM systems compared to arbuscular (AM) systems.In this data package, we included:-The Python codes of the standard Myco-CORPSE model we developed: "Standard Myco_CORPSE python codes.zip". The main program is the "gradient_sim.py" which calculates the bulk soil microbes and CN content along a user defined gradient of clay, soil temperature, soil moisture and mycorrhizal dominance, and relies on two subprograms "CORPSE_deriv.py" and "CORPSE_integrate.py". "CORPSE_deriv.py" calculated the changes in all simulated soil stock within every time step and "CORPSE_integrate.py" integrate the changes in all simulated soil stock within simulated time period. The program "Plot.py" is used to plot the major outputs produced by the main program "gradient_sim.py".-The modified Python codes of Myco-CORPSE models with site-level environmental inputs (in NH and GA) used to conduct simulations in NH and GA sites: "NH_GA model simulations.zip". -The Python codes used to evaluate the Myco-CORPSE simulation outputs in NH and GA sites against site-level measurements: "Plot NH_GA simulation against measurements.zip". It includes both the evaluation Python code, the model outputs on NH and GA sites, and the measured soil properties in both sites.-The modified Python codes of Myco-CORPSE models "Scenario analysis_model simulations.zip" that is used to conduct scenario analysis of how different litter properties, mycorrhizal fungal traits, climate, and seasonal variation in temperature and vegetation phenology impact the mycorrhizal effects on soil CN properties. The sub file folder "Scenario analysis_litter traits" contains the codes for scenario analysis of different litter properties; The sub file folder "Scenario analysis_ECM types" contains the codes for scenario analysis of different ECM fungal traits; The sub file folder "Scenario analysis_climate&seasonality" contains the codes for scenario analysis of different climate and seasonalities;-"Scenario analysis_model results and plotting codes.zip" contains all the output files from the the scenario analysis of Myco-CORPSE model as described above and the plotting codes used to the generate the heatmaps and scatterplots shown in the manuscript "Ectomycorrhizal effects on decomposition are highly dependent on fungal traits, climate, and litter properties: A model-based assessment"The majority of the model outputs did not have specific geographic information or temporal coverage because the analysis we conducted are mainly hypothetical model simulations. We only provided geographic description, coordinates and temporal coverage for those soil measurements which we used for model evaluations (included in the "Plot NH_GA simulation against measurements.zip").

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

MLP-NN vs Gauss-Newton files

-Input files for randomly selected subset data (30 instances) from primary dipole-dipole forward modeling data.-Inversion results in surfer grid format as well as in .DAT format.-Scatterplots for MLP-NN vs Gauss-Newton present in the excel sheet.

58 GEOSCIENCES↗
NASA NTRS1984

Performance evaluation and geologic utility of LANDSAT-4 TM and MSS data

Radiometric calibration accuracy of TM data, radiometric comparison of A-, B-, and P-format data, and geometric registration accuracy of the TM data at enlarged scales were analyzed. Radiometric analysis of the Wind River Basin, Wyoming scene demonstrates that the TM system can be used to extract image reflectance spectra from ground targets following calibration of the system. It was also demonstrated that: (1) image DN (radiance values) vs. ground reflectance calibration scatterplots yield parameters which can be used to constrain atmospheric models and can determine TM radiometric sensitivity; (2) no significant degradation occurs as a result of radiometric and geometric correction by SCROUNGE processing; and (3) TM data can be enlarged to 1:24000 with no major geometric distortions or misregistration problems to USGS topographic maps.

Paylor, E. D.↗
NASA NTRS1984

Preliminary Geologic/spectral Analysis of LANDSAT-4 Thematic Mapper Data, Wind River/bighorn Basin Area, Wyoming

A LIDQA evaluation for geologic applications of a LANDSAT TM scene covering the Wind River/Bighorn Basin area, Wyoming, is examined. This involves a quantitative assessment of data quality including spatial and spectral characteristics. Analysis is concentrated on the 6 visible, near infrared, and short wavelength infrared bands. Preliminary analysis demonstrates that: (1) principal component images derived from the correlation matrix provide the most useful geologic information. To extract surface spectral reflectance, the TM radiance data must be calibrated. Scatterplots demonstrate that TM data can be calibrated and sensor response is essentially linear. Low instrumental offset and gain settings result in spectral data that do not utilize the full dynamic range of the TM system.

Lang, H. R.↗
NASA NTRS1992

A study of rain estimation methods from space using dual-wavelength radar measurements at near-nadir incidence over ocean

A question arising from the recent interest in spaceborne weather radar is what methods can be used to estimate precipitation parameters from space. In this paper, dual-wavelength airborne radar data obtained from flights conducted during 1988 and 1989 are used to compare rain rates derived from backscattering and attenuation methods. To help interpret the results the surface reference methods are studied by means of scatterplots of the surface cross sections at the two frequencies under rain and no-rain conditions. Approximate criteria are given on combining attenuation and backscattering methods to increase the effective dynamic range of the radar. The dual-wavelength capability of the radar is also used to examine the vertical structure of the precipitation. Another factor affecting the accuracy of the methods is the drop-size distribution. In the final section of the paper a procedure to estimate the profiled drop-size distribution is applied to the measured radar data.

Meneghini, R.↗
NASA NTRS1994

Duration versus brightness of gamma-ray bursts: Comparisons between SIGNE and BATSE

We analyze duration and brightness distributions of both the SIGNE Venera 13 and 14 and Burst and Transient Source Experiment (BATSE) gamma-ray burst databases. Choosing T(sub 50) as a measure of the burst duration and using both 64 and 1024 ms peak count rates, we search for correlations between duration, peak brightness, and the ratio V identically equals C(sub 64)/C(sub 1024), proposed as a measure of variability by Lamb, Graziani, & Smith. The duration histogram for SIGNE shows a long-duration peak that is consistent with BATSE, but does not exhibit the short population, instead appearing flat below 0.6 s; the difference is presumably caused by the failure of SIGNE to detect the short, faint bursts that were observed by BATSE. Estimating the instantaneous brightness by C(sub 64), we find that SIGNE confirms the BATSE result that the long and short bursts have similar maximum instantaneous brightnesses. Scatterplots between duration, brightness, and V are consistent for both databases; we show that SIGNE confirms the BATSE observation that there is a lack of bursts that are both bright over 1024 ms and contain a short, bright spike.

Kargatis, V. E.↗
NASA NTRS2000

On the Bimodality of ENSO Cycle Extremes

On the basis of sea surface temperature in the El Nino 3.4 region (5 deg. N.,-5 deg. S., 120-170 deg. W.) during the interval of 1950-1997, Kevin Trenberth previously has identified some 16 El Nino and 10 La Nina, these 26 events representing the extremes of the quasi-periodic El Nino-Southern Oscillation (ENSO) cycle. Runs testing shows that the duration, recurrence period, and sequencing of these extremes vary randomly. Hence, the decade of the 1990's, especially for El Nino, is not significantly different from that of previous decadal epochs, at least, on the basis of the frequency of onsets of ENSO extremes. Additionally, the distribution of duration for both El Nino and La Nina looks strikingly bimodal, each consisting of two preferred modes, about 8- and 16-mo long for El Nino and about 9- and 18-mo long for La Nina, as does the distribution of the recurrence period for El Nino, consisting of two preferred modes about 21- and 50-mo long. Scatterplots of the recurrence period versus duration for El Nino are found to be statistically important, displaying preferential associations that link shorter (longer) duration with shorter (longer) recurrence periods. Because the last onset of El Nino occurred in April 1997 and the event was of longer than average duration, onset of the next anticipated El Nino is not expected until February 2000 or later.

Wilson, Robert M.↗
NASA NTRS2000

On The Bimodality of ENSO Cycle Extremes

On the basis of sea surface temperature in the El Nino 3.4 region (5N.-5S., 120-170W.) during the interval of 1950-1997, Kevin Trenberth previously has identified some 16 El Nino and 10 La Nina, these 26 events representing the extremes of the quasi-periodic El Nino-Southern Oscillation (ENSO) cycle. Runs testing shows that the duration, recurrence period, and sequencing of these extremes vary randomly. Hence, the decade of the 1990's, especially for El Nino, is not significantly different from that of previous decadal epochs, at least, on the basis of the frequency of onsets of ENSO extremes. Additionally, the distribution of duration for both El Nino and La Nina looks strikingly bimodal, each consisting of two preferred modes, about 8- and 16-months long for El Nino and about 9- and 18-months long for La Nina, as does the distribution of the recurrence period for El Nino, consisting of two preferred modes about 21- and 50- mo long. Scatterplots of the recurrence period versus duration for El Nino are found to be statistically important, displaying preferential associations that link shorter (longer) duration with shorter (longer) recurrence periods. Because the last onset of El Nino occurred in April 1997 and the event was of longer than average duration, onset of the next anticipated El Nino is not expected until February 2000 or later.

Wilson, Robert M.↗
NASA NTRS2004

A New, More Physically Based Algorithm, for Retrieving Aerosol Properties over Land from MODIS

The MOD Imaging Spectrometer (MODIS) has been successfully retrieving aerosol properties, beginning in early 2000 from Terra and from mid 2002 from Aqua. Over land, the retrieval algorithm makes use of three MODIS channels, in the blue, red and infrared wavelengths. As part of the validation exercises, retrieved spectral aerosol optical thickness (AOT) has been compared via scatterplots against spectral AOT measured by the global Aerosol Robotic NETwork (AERONET). On one hand, global and long term validation looks promising, with two-thirds (average plus and minus one standard deviation) of all points falling between published expected error bars. On the other hand, regression of these points shows a positive y-offset and a slope less than 1.0. For individual regions, such as along the U.S. East Coast, the offset and slope are even worse. Here, we introduce an overhaul of the algorithm for retrieving aerosol properties over land. Some well-known weaknesses in the current aerosol retrieval from MODIS include: a) rigid assumptions about the underlying surface reflectance, b) limited aerosol models to choose from, c) simplified (scalar) radiative transfer (RT) calculations used to simulate satellite observations, and d) assumption that aerosol is transparent in the infrared channel. The new algorithm attempts to address all four problems: a) The new algorithm will include surface type information, instead of fixed ratios of the reflectance in the visible channels to the mid-IR reflectance. b) It will include updated aerosol optical properties to reflect the growing aerosol retrieved from eight-plus years of AERONE". operation. c) The effects of polarization will be including using vector RT calculations. d) Most importantly, the new algorithm does not assume that aerosol is transparent in the infrared channel. It will be an inversion of reflectance observed in the three channels (blue, red, and infrared), rather than iterative single channel retrievals. Thus, this new formulation of the MODIS aerosol retrieval over land includes more physically based surface, aerosol and radiative transfer with fewer potentially erroneous assumptions.

Levy, Robert C.↗
NASA NTRS2006

On the Relation Between Sunspot Area and Sunspot Number

Often, the relation between monthly or yearly averages of total sunspot area, A, and sunspot number, R, has been described using the formula A = 16.7 R. Such a simple relation, however, is erroneous. The yearly ratio of A/R has varied between 5.3 in 1964 to 19.7 in 1926, having a mean of 13.1 with a standard deviation of 3.5. For 1875-1976 (corresponding to the Royal Greenwich Observatory timeframe), the yearly ratio of A/R has a mean of 14.1 with a standard deviation of 3.2, and it is found to differ significantly from the mean for 1977-2004 (corresponding to the United States Air Force/National Oceanic and Atmospheric Administration Solar Optical Observing Network timeframe), which equals 9.8 with a standard deviation of 2.1. Scatterplots of yearly values of A versus R are highly correlated for both timeframes and they suggest that a value of R = 100 implies A=1,538 +/- 174 during the first timeframe, but only A=1,076 +/- 123 for the second timeframe. Comparison of the yearly ratios adjusted for same day coverage against yearly ratios using Rome Observatory measures for the interval 1958-1998 indicates that sunspot areas during the second timeframe are inherently too low.

Wilson, Robert M.↗