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Multi-Agency Annual Southeastern Beach Mouse Habitat Occupancy Monitoring

The southeastern beach mouse (Peromyscus polionotus niveiventris, hereafter SEBM), a federally threatened species was identified by Merritt Island National Wildlife Refuge (MINWR) as one of the top five priorities for management. The Kennedy Space Center (KSC) Environmental Management Branch was asked to provide support in the form of population monitoring for SEBM on KSC and the surrounding properties. When we began the project, the SEBM was known to occupy sites ranging from Volusia through Brevard and Indian River Counties, but the exact distribution within the Federal lands encompassing the Cape Canaveral Barrier Island Complex (CCBIC) was not well known. The broad range of habitat conditions encompassing the species’ historical range and the diversity of sites historically known to contain SEBM required a landscape-scale approach for both monitoring the population and for investigating species habitat relationships. We designed a monitoring plan for the SEBM with the goal of estimating the habitat occupancy of beach mice annually each winter/spring throughout the entire area of suitable coastal habitat (approximately 72 km linear distance along the beach). Methods were tested in a 2008 pilot study, and during 2010-2018 we monitored the proportion of coastal habitat occupied by the SEBM on the CCBIC. Monitoring was focused on using dynamic habitat occupancy surveys with data collected with rapid assessment techniques (i.e., track tubes or live-traps) to detect SEBM occurrence at sampling stations. An important component of the study design was the use of repeated samples that provided the information needed to estimate detectability. Measuring detectability was required to account for the fact that surveys could fail to detect animals at sites at which they were actually present (Mackenzie et al., 2002). This monitoring framework is very flexible, allowing numerous hypothesis to be tested about how various factors influence beach mouse occupancy using habitat, geographic, and environmental covariates. Our survey has been the longest survey conducted for any of the seven extant beach mouse subspecies and has encompassed nearly the entire remaining range of the SEBM. Although occupancy surveys of other beach mouse subspecies via track tubes have been conducted on the Gulf coast of Florida by Florida Fish and Wildlife Conservation Commission (FWC), United States Fish and Wildlife Service (USFWS), and various universities, we expanded previous methods to fit unique aspects of the SEBM, and thus our study was very different from any of the previous studies. To achieve this specificity, we employed an adaptive approach throughout the study, with all activities aimed at providing managers with information related to environmental compliance and natural resource management on KSC and the surrounding Federal lands.

Eric Douglas Stolen↗

The Voyager 1 EUV spectrum of the Io plasma torus

The Voyager 1 EUV spectrum of the hot Io plasma torus obtained before encounter in 1979 at a range of 4,800,000 km is analyzed in terms of a collisional model with improved collision strengths. Model calculations are based entirely on steady-state equilibrium between electron excitation-deactivation and radiative decay in the subspecies structure, and plasma temperature and species number densities are derived by fitting model spectra to the observations. Lines of S II, S III, S IV, O II, and O III are found to be dominant in the plasma torus, at torus half width densities of 44, 160, 220, 50, and 340/cu cm, respectively, and lines of S V and K III may also be present. An effective electron temperature of 80,000 K is estimated for the central dense region near 6 Jupiter radii. Model calculations are in substantial agreement with other spectroscopic observations of the hot torus; however, the observations exhibit strong morphological differences with recent ground-based observations of S II emission, and calculated ion densities differ from in situ Voyager 1 plasma science measurements.

Shemansky, D. E.↗

Effect of Ablation of Area Postrema on Frequency and Latency of Motion Sickness-Induced Emesis in the Squirrel Monkey

Twelve young adult squirrel monkeys of the Bolivian subspecies were subjected to continuous counter-clockwise horizontal rotary motion at 25 rpm, together with a sinusoidal vertical excursion of 6 in. every 2 sec (0.5 Hz). Each animal was exposed to this motion regimen for a period of 60 min once each week for three consecutive weeks. Following the third weekly motion test bilateral ablation of the Area Postrema (AP) was performed in eight of the animals by thermal cautery. Two control animals were sham-operated after the third motion test while two additional controls were given the motion tests as noted above but were not operated. The four controls were considered as a single group for statistical analyses of results of the motion tests. After a recovery period of 30 to 40 days, and at a comparable interval in the non-operated controls, each animal was again tested for motion sensitivity for three consecutive weeks. The brains of all of the animals were then fixed by left ventriculal cardiac perfusion with Bouin's fluid and processed for histological evaluation of the bilateral AP ablation in comparison with the control brains. Five of the AP-ablated animals postoperatively were completely refractory to the motion stimuli, two exhibited a decreased number of emetic responses, and one exhibited the same number of responses before and after the AP lesions. The controls exhibited no significant difference in emetic sensitivity on the second series of three weekly tests than on the first series. The results of this investigation appear to be in agreement with the observations of Wang and Chinn in the dog indicating that the integrity of the AP (CTZ) is essential to the emetic response to motion.

Brizzee, K. R.↗

An Electrothermodynamic Model with Distributed Properties for Effective Permittivities of Sea Ice

This paper presents a model to calculate the temperature dependence of effective permittivities for sea ice, a heterogeneous medium containing multiphase scatterers. With the strong permittivity fluctuation approach the model accounts for the electrodynamic scattering effect together with the quasi-static characteristics of multiple species and subspecies of inhomogeneities with distributed orientations, sizes, and shapes. Because of a preferential direction in the orientation distribution, the medium is effectively anisotropic. The size distribution is described with a probability density function in terms of normalized volumetric sizes. Scatterer shapes are nonuniform and have a general ellipsoidal form characterized by arbitrary axial ratios of correlation lengths which are related to physical geometries of the scatterers. In this formulation, sea ice consisting of solid ice, liquid brine, and gaseous inclusions is modeled to derive effective permittivities with thermodynamic phase redistribution and structural metamorphism. Theoretical results are in good agreement with experimental data at the C band frequency of 4.8 GHz for saline ice undergoing warming and cooling cycles. A competitive effect between the increase of liquid brine and the shape rounding of ellipsoidal scatterers at increasing temperatures explains the trend observed in measured data. Sensitivities of effective permittivities to structural and physical parameters characterizing sea ice are also studied.

Nghiem, S. V.↗

An Investigation of the Migration of Africanized Honey Bees into the Southern United States

It is estimated that Apis mellifera scutellata, a honey bee subspecies from Africa, now extends over a 20 million square kilometer range that includes much of South America and practically all of Central America, and recently has been introduced to the southern United States. African honeybees were introduced into Brazil in 1956 by a Brazilian geneticist, Mr. Warwick Kerr. At the insistence of the Brazilian Ministry of Agriculture, in 1957, 26 colonies were accidentally released in a eucalyptus forest outside S5o Paulo. The swelling front of the bees was recorded as traveling between 80 and 500 kilometers a year. David Roubik, one of the original killer bee team members estimated that there were one trillion individual Africanized/African honey bees in Latin America. An estimate that is thought to be conservative.

Navarro, Hector↗

Microbial Extremophiles in Aspect of Limits of Life

During Earth's evolution accompanied by geophysical and climatic changes a number of ecosystems have been formed. These ecosystems differ by the broad variety of physicochemical and biological factors composing our environment. Traditionally, pH and salinity are considered as geochemical extremes, as opposed to the temperature, pressure and radiation that are referred to as physical extremes (Van den Burg, 2003). Life inhabits all possible places on Earth interacting with the environment and within itself (cross species relations). In nature it is very rare when an ecotope is inhabited by a single species. As a rule, most ecosystems contain the functionally related and evolutionarily adjusted communities (consortia and populations). In contrast to the multicellular structure of eukaryotes (tissues, organs, systems of organs, whole organism), the highest organized form of prokaryotic life in nature is the benthic colonization in biofilms and microbial mats. In these complex structures all microbial cells of different species are distributed in space and time according to their functions and to physicochemical gradients that allow more effective system support, self-protection, and energy distribution. In vitro, of course, the most primitive organized structure for bacterial and archaeal cultures is the colony, the size, shape, color, consistency, and other characteristics of which could carry varies specifics on species or subspecies levels. In table 1 all known types of microbial communities are shown (Pikuta et a]., 2005). In deep underground (lithospheric) and deep-sea ecosystems an additional factor - pressure, and irradiation - could also be included in the list of microbial communities. Currently the beststudied ecosystems are: human body (due to the medical importance), and fresh water and marine ecosystems (due to the reason of an environmental safety). For a long time, extremophiles were terra incognita, since the environments with aggressive parameters (compared to the human body temperature, pH, mineralization, and pressure) were considered a priori as a dead zone.

Pikuta, Elena V.↗

Methods for determining the genetic affinity of microorganisms and viruses

Selecting which sub-sequences in a database of nucleic acid such as 16S rRNA are highly characteristic of particular groupings of bacteria, microorganisms, fungi, etc. on a substantially phylogenetic tree. Also applicable to viruses comprising viral genomic RNA or DNA. A catalogue of highly characteristic sequences identified by this method is assembled to establish the genetic identity of an unknown organism. The characteristic sequences are used to design nucleic acid hybridization probes that include the characteristic sequence or its complement, or are derived from one or more characteristic sequences. A plurality of these characteristic sequences is used in hybridization to determine the phylogenetic tree position of the organism(s) in a sample. Those target organisms represented in the original sequence database and sufficient characteristic sequences can identify to the species or subspecies level. Oligonucleotide arrays of many probes are especially preferred. A hybridization signal can comprise fluorescence, chemiluminescence, or isotopic labeling, etc.; or sequences in a sample can be detected by direct means, e.g. mass spectrometry. The method's characteristic sequences can also be used to design specific PCR primers. The method uniquely identifies the phylogenetic affinity of an unknown organism without requiring prior knowledge of what is present in the sample. Even if the organism has not been previously encountered, the method still provides useful information about which phylogenetic tree bifurcation nodes encompass the organism.

Fox, George E.↗

Diversity Buffers Winegrowing Regions from Climate Change Losses

Agrobiodiversity—the variation within agricultural plants, animals, and practices—is often suggested as a way to mitigate the negative impacts of climate change on crops [S. A. Wood et al., Trends Ecol. Evol. 30, 531–539 (2015)]. Recently, increasing research and attention has focused on exploiting the intraspecific genetic variation within a crop [Hajjar et al., Agric. Ecosyst. Environ. 123, 261–270 (2008)], despite few relevant tests of how this diversity modifies agricultural forecasts. Here, we quantify how intraspecific diversity, via cultivars, changes global projections of growing areas. We focus on a crop that spans diverse climates, has the necessary records, and is clearly impacted by climate change: winegrapes (predominantly Vitis vinifera subspecies vinifera). We draw on long-term French records to extrapolate globally for 11 cultivars (varieties) with high diversity in a key trait for climate change adaptation—phenology. We compared scenarios where growers shift to more climatically suitable cultivars as the climate warms or do not change cultivars. We find that cultivar diversity more than halved projected losses of current winegrowing areas under a 2 °C warming scenario, decreasing areas lost from 56 to 24%. These benefits are more muted at higher warming scenarios, reducing areas lost by a third at 4 °C (85% versus 58%). Our results support the potential of in situ shifting of cultivars to adapt agriculture to climate change—including in major winegrowing regions—as long as efforts to avoid higher warming scenarios are successful.

Morales-Castilla, Ignacio↗

An Electrothermodynamic Model With Distributed Properties for Effective Permittivities of Sea Ice

This paper presents a model to calculate the temperature dependence of effective permittivities for a heterogeneous anisotropic medium containing multiphase scatters. With the strong permittivity fluctuation approach, the model is developed to account for the electrodynamic scattering effect together with the quasi-static characteristics of multiple species and subspecies of inhomogeneities with distributed orientations, sizes, and shapes.

sea↗

Measuring Metapopulation Characteristics of the Southeastern Beach Mouse on Kennedy Space Center using a Dynamic Habitat Occupancy Approach

The Cape Canaveral Barrier Island Complex (CCBIC) represents the largest (72 km) continuous coastal habitat supporting the core population of the threatened southeastern beach mouse (Peromyscus polionotus niveiventris) in Florida. Despite protection throughout the subspecies’ remaining range, storm activity during the past two decades has de-stabilized coastal dune and coastal strand habitat required for beach mouse survival. Our long-term goal is to provide information to the management process to ensure a sustainable population on the CCBIC in light of sea-level rise, extreme storm events, and continued land development supporting the multi-user spaceport.Because beach mice populations are affected by storms (hurricanes, tropical storms, nor’easters), it is important to understand the species-habitat relations during periods with and without storm impacts. Conventional wisdom is that coastal dune and coastal strand are the preferred habitats, but coastal scrub habitat may be important because it is less affected by storm impacts (e.g., overwash, escarpment, sand deposition, etc.) and thus may serve as a refugia. In addition, genetic studies have shown some evidence for reduced dispersal between regions on CCBIC (Kalkvik et al., 2012; Zimmerman et al., 2015). We compared site occupancy dynamics for coastal dune, coastal strand, and coastal scrub habitat over three quarters (seasons) and determined the pattern of spatial correlation in habitat occupancy dynamics for locations at a range of distances in coastal dune, coastal strand, and coastal scrub habitats along the Kennedy Space Center (KSC) coastline (Figures1 and 2). Although habitat occupancy is very useful for understanding species-habitat relationships,in its simplest form it ignores differences in abundance between sites. Because information on abundance may inform management efforts and provide knowledge regarding status of the population, we tested measuring abundance state based on the number of detections in tracking tubes. Small mammal populations often fluctuate in a cyclic manner over time. These fluctuations make populations more susceptible to extinction and make trend detection more difficult. Efficient methods of measuring abundance across time and space are needed for monitoring trends.The purpose of this project was to:1.Estimate southeastern beach mouse habitat occupancy parameters in coastal dune, coastal strand, and coastal scrub habitats using a combination of tracking tubes and traps; 2.Model the spatial relationships of the effect of habitat (coastal dune, coastal strand, and coastal scrub) on parameters as a function of distance; and 3.Compare the reliability and efficiency of our survey methods and evaluate the potential to develop an abundance index.

Eric Douglas Stolen↗