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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 19 records
All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

Gas-mediated trace element incorporation into rhyolite-hosted topaz: A synchrotron microbeam XAS study

Magmatic gas exsolving during late-stage cooling of shallow magmas has been considered an important facilitator of low-pressure alteration and metal transport. However, the chemical properties of such gas, particularly its metal transport mechanisms and capacity, remain elusive. Trace elements in minerals produced by gas-mediated surface reaction or precipitation from gas capture details of gas composition and reaction pathways. However, interpretation of mineral trace element contents is dependent on understanding crystallographic controls on gas/mineral partitioning. Here, this work investigates the structural accommodation of As, Mn, Ga, Ge, Fe, and Ti in vapor-deposited topaz of vesicular topaz rhyolite from the Thomas Range, Utah, through single-crystal synchrotron microbeam X-ray techniques on picogram quantities of those trace elements. X-ray absorption near edge structure (XANES) data indicates that these elements are incorporated into topaz as As 5+ , Fe 3+ , Mn 3+ , Ti 4+ , Ga 3+ , and Ge 4+ . Extended X-ray absorption fine structure (EXAFS) analysis for these trace elements, compared to EXAFS of structural Al and Si, reveals that As 5+ and Ge 4+ are incorporated directly into the tetrahedral site of the topaz structure, with the octahedral site accommodating Mn 3+ , Fe 3+ , Ga 3+ , and Ti 4+ . For As 5+ and Fe 3+ , the structural impact of substitution extends to at least second neighbors (other elements were only resolvable to first neighbors). Further interpretation of the EXAFS results suggests that the substitution of Ti 4+ results in increased distortion of the octahedral site, while the other trace elements induce more uniform expansion correlating in magnitude to their ionic radius. Comparison of quantified X-ray fluorescence (XRF) data for two topaz crystals from this rhyolite reveals variable trace element concentrations for As 5+ , Fe 3+ , Ga 3+ , and Ti 4+ , reflective of a source gas undersaturated in these trace elements changing in concentration over the period of topaz deposition. The identical Ge 4+ content of the two topaz crystals suggests that Ge 4+ in the gas was buffered by the growth of another Ge 4+ -bearing phase, such as quartz. The very low Mn 3+ content in the topaz crystals does not reflect the abundance of Mn 3+ in the gas (saturation of Mn is evidenced by coexisting bixbyite). Instead, it suggests a strong Jahn-Teller inhibitory effect to the substitution of Mn 3+ for Al 3+ in the distorted octahedral site of topaz. It is proposed that exsolution of an HF-enriched gas from cooling rhyolitic magma led to local scouring of Al, Si, and trace metals from the magma. Once topaz crystals nucleated, self-catalyzed reactions that recycle HF led to continued growth of topaz.

36 MATERIALS SCIENCE↗
NASA NTRS1998

Investigation and Feasibility Assessment of TOPAZ-2 Derivations for Space Power Applications

The ability to provide continuous power at significant levels is of utmost importance for many space missions, from simple satellite operations to manned Mars missions. One of the main problems faced in delivering solar or chemical space power in the tens of kW range, is the increasingly massive nature of the power source and the costs associated with its launch, operation and maintenance. A national program had been initiated to study the feasibility of using certain advanced technologies in developing an efficient lightweight space power source. The starting point for these studies has been the Russian TOPAZ-2 space reactor system, with the ultimate goal to aid in the development of a TOPAZ-2 derivative which will be ready for flight by the year 2000. The main objective of this project has been to perform feasibility assessment and trade studies which would allow the development of an advanced space nuclear power system based on the in-core thermionic fuel element technology currently used in the Russian TOPAZ-2 reactor. Two of the important considerations in developing the concept are: (1) compliance of the current TOPAZ-2 and of any advanced designs with U.S. nuclear safety expectations, and (2) compliance of the design with the seven years lifetime requirement. The project was composed of two major phases. The initial phase of the project has concentrated on understanding the TOPAZ-2 thermionic reactor in sufficient detail to allow several follow-on tasks. The primary interest during this first phase has been given on identifying the potential of the TOPAZ-2 design for further improvements. The second phase of the project has focused on the feasibility of a TOPAZ-2 system capable of delivering 30-50 kWe. Towards the elimination of single-point failures in the load voltage regulation system an active voltage regulator has been designed to be used in conjunction with the available shunt load voltage regulator. The possible use of a dual-loop, model-based adaptive control system for load-following in the TOPAZ-2 has also been investigated. The objective of this fault-tolerant, autonomous control system is to deliver the demanded electric power at the desired voltage level, by appropriately manipulating the neutron power through the control drums. As a result, sufficient thermal power is produced to meet the required demand in the presence of dynamically changing system operating conditions and potential sensor failures. The designed controller is proposed for use in combination with the currently available shunt regulators, or as a back-up controller when other means of power system control, including some of the sensors, fail.

Parlos, Alexander G.↗
DOE OSTI2020

Topaz, a Potential Volatile-Carrier in Cold Subduction Zone: Constraint from Synchrotron X-ray Diffraction and Raman Spectroscopy at High Temperature and High Pressure

The equation of state and stability of topaz at high-pressure/high-temperature conditions have been investigated by in situ synchrotron X-ray diffraction (XRD) and Raman spectroscopy in this study. No phase transition occurs on topaz over the experimental pressure–temperature ($P-T$) range. The pressure–volume data were fitted by the third-order Birch–Murnaghan equation of state (EoS) with the zero-pressure unit–cell volume V 0 = 343.86 (9) Å 3 , the zero-pressure bulk modulus K 0 = 172 (3) GPa, and its pressure derivative K’ 0 = 1.3 (4), while the obtained K 0 = 155 (2) GPa when fixed K’ 0 = 4. In the pressure range of 0–24.4 GPa, the vibration modes of in-plane bending OH-groups for topaz show non-linear changes with the increase in pressure, while the other vibration modes show linear changes. Moreover, the temperature–volume data were fitted by Fei’s thermal equation with the thermal expansion coefficient α 300 = 1.9 (1) × 10 –5 K –1 at 300 K. Finally, the $P-T$ stability of topaz was studied by a synchrotron-based single-crystal XRD at simultaneously high $P-T$ conditions up to ~10.9 GPa and 700 K, which shows that topaz may maintain a metastable state at depths above 370 km in the upper mantle along the coldest subducting slab geotherm. Thus, topaz may be a potential volatile-carrier in the cold subduction zone. It can carry hydrogen and fluorine elements into the deep upper mantle and further affect the geochemical behavior of the upper mantle.

36 MATERIALS SCIENCE↗
DOE OSTI2022

Implications of Sound Velocities of Natural Topaz on the Seismic L–Discontinuity

Compressional and shear wave velocities of topaz have been measured by ultrasonic interferometry in a multi-anvil apparatus up to 13 GPa at room temperature. By fitting the measured velocities under pressure to finite strain equations, the elastic moduli of topaz and their pressure derivatives were obtained, yielding K S0 = 165.5 (25) GPa, K S ' = 2.9 (1), G 0 = 116.5 (17) GPa, and G' = 1.0 (1). Modeling of the velocity profiles of subducted sediments suggests that at 8 GPa (~240 km depth) the P- and S- wave velocities of the subducted sediments exhibit a first order increase of 10% and 11%, respectively. Furthermore, the comparison between seismic observations and velocity contrasts of sediment + MORB model at 240 km shows dehydration of a 1.5–3.9 km thick sediment layer can potentially contribute to the seismically observed Lehmann discontinuity in Tonga, Japan, Philippine Sea, South America, Indonesia, and South Shetland subduction zones.

36 MATERIALS SCIENCE↗
DOE OSTI2020

On single-crystal neutron-diffraction in DACs: quantitative structure refinement of light elements on SNAP and TOPAZ

Quantitative single crystal neutron-diffraction in diamond anvil cells has so far been limited by the neutron flux available at the various neutron sources. As a result, highly precise measurements of the exact position of light elements have not been possible preventing, for example, structural studies of hydrogen and hydrogen bonds under pressure. Here we report experiments carried out on SNAP at the Spallation Neutron Source (ORNL, TN, USA) to explore the possibility and current limits of such studies. Furthermore, we benchmarked the obtained data quality with reference experiments carried out on TOPAZ, a dedicated single-crystal instrument.We show that measuring single-crystal diffraction intensities on SNAP is possible to such a precision that we are able to resolve the hydrogen bonds in potassium dideuterium phosphate (DKDP) as well as in ice VI.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
NASA NTRS1972

Nuclear magnetic resonance of Al-27 in topaz, Al2SiO4/F, OH/2.

The Al-27 nuclear quadrupolar coupling constant and asymmetry parameter (eta) in topaz have been determined to be 1.67 (plus or minus 0.03) MHz and 0.38 plus or minus 0.05, respectively. These values and the orientations of the principal axes are consistent with the Fe(3+) paramagnetic resonance data and with the symmetry of the AlO4F2 octahedron.

Tsang, T.↗
NASA NTRS1988

Ongonite and topazite dikes in the Flying W ranch area, Tonto basin, Arizona

The petrogenesis of the topaz-rich ongonite and topazite dikes in the Flying W ranch area (Tonto basin, Arizona) was investigated, and the possible origin of the topaz in the Flying W rhyolite is discussed. The field, textural geochemical, and mineralogical characteristics of the topaz-bearing dikes in the Flying W ranch area all were found to support the genesis of the topaz-bearing bodies from a magma. The evidence obtained contradicts an origin for these rock types by greisenization or veining.

Kortemeier, Winifred T.↗
DOE OSTI2023

Eukaryotic genomes from a global metagenomic data set illuminate trophic modes and biogeography of ocean plankton

ABSTRACT Metagenomics is a powerful method for interpreting the ecological roles and physiological capabilities of mixed microbial communities. Yet, many tools for processing metagenomic data are neither designed to consider eukaryotes nor are they built for an increasing amount of sequence data. EukHeist is an automated pipeline to retrieve eukaryotic and prokaryotic metagenome-assembled genomes (MAGs) from large-scale metagenomic sequence data sets. We developed the EukHeist workflow to specifically process large amounts of both metagenomic and/or metatranscriptomic sequence data in an automated and reproducible fashion. Here, we applied EukHeist to the large-size fraction data (0.8–2,000 µm) from Tara Oceans to recover both eukaryotic and prokaryotic MAGs, which we refer to as TOPAZ (Tara Oceans Particle-Associated MAGs). The TOPAZ MAGs consisted of >900 environmentally relevant eukaryotic MAGs and >4,000 bacterial and archaeal MAGs. The bacterial and archaeal TOPAZ MAGs expand upon the phylogenetic diversity of likely particle- and host-associated taxa. We use these MAGs to demonstrate an approach to infer the putative trophic mode of the recovered eukaryotic MAGs. We also identify ecological cohorts of co-occurring MAGs, which are driven by specific environmental factors and putative host-microbe associations. These data together add to a number of growing resources of environmentally relevant eukaryotic genomic information. Complementary and expanded databases of MAGs, such as those provided through scalable pipelines like EukHeist, stand to advance our understanding of eukaryotic diversity through increased coverage of genomic representatives across the tree of life. IMPORTANCE Single-celled eukaryotes play ecologically significant roles in the marine environment, yet fundamental questions about their biodiversity, ecological function, and interactions remain. Environmental sequencing enables researchers to document naturally occurring protistan communities, without culturing bias, yet metagenomic and metatranscriptomic sequencing approaches cannot separate individual species from communities. To more completely capture the genomic content of mixed protistan populations, we can create bins of sequences that represent the same organism (metagenome-assembled genomes [MAGs]). We developed the EukHeist pipeline, which automates the binning of population-level eukaryotic and prokaryotic genomes from metagenomic reads. We show exciting insight into what protistan communities are present and their trophic roles in the ocean. Scalable computational tools, like EukHeist, may accelerate the identification of meaningful genetic signatures from large data sets and complement researchers’ efforts to leverage MAG databases for addressing ecological questions, resolving evolutionary relationships, and discovering potentially novel biodiversity.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2024

CryoSegNet: accurate cryo-EM protein particle picking by integrating the foundational AI image segmentation model and attention-gated U-Net

Picking protein particles in cryo-electron microscopy (cryo-EM) micrographs is a crucial step in the cryo-EM-based structure determination. However, existing methods trained on a limited amount of cryo-EM data still cannot accurately pick protein particles from noisy cryo-EM images. The general foundational artificial intelligence–based image segmentation model such as Meta’s Segment Anything Model (SAM) cannot segment protein particles well because their training data do not include cryo-EM images. Here, we present a novel approach (CryoSegNet) of integrating an attention-gated U-shape network (U-Net) specially designed and trained for cryo-EM particle picking and the SAM. The U-Net is first trained on a large cryo-EM image dataset and then used to generate input from original cryo-EM images for SAM to make particle pickings. CryoSegNet shows both high precision and recall in segmenting protein particles from cryo-EM micrographs, irrespective of protein type, shape and size. On several independent datasets of various protein types, CryoSegNet outperforms two top machine learning particle pickers crYOLO and Topaz as well as SAM itself. The average resolution of density maps reconstructed from the particles picked by CryoSegNet is 3.33 Å, 7% better than 3.58 Å of Topaz and 14% better than 3.87 Å of crYOLO. It is publicly available at https://github.com/jianlin-cheng/CryoSegNet

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

EVOLUTION OF SPACE REACTOR QUALIFICATION METHODS AND A PATH FORWARD FOR NEW SPACE REACTORS UNDER CONSIDERATION

These slides outline the evolution of space reactor system qualifications and provide a potential framework for qualification of current space reactor concepts. Qualification approaches for SNAP 10A, SP-100, TOPAZ II, and Prometheus reactor systems will be discussed. Several qualification approaches from past reactors will be reviewed including: a component qualification approach demonstrated in the SNAP reactor program, a system level approach in the SP-100 program, adding additional features to an existing design in the TOPAZ program, and a combination of a computational and basic testing approach for the Prometheus reactor. Past and present test facilities will also be discussed and the impact of test facility availability (or existence) is discussed. A suggested approach that complies with the updated Presidential Directive (NSPM-20, August 2019) that is derived from previous program approaches will be discussed for qualification of future space reactors.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗
NASA NTRS1992

NEP Space Test Program Objective

The objective of the Nuclear Electric Propulsion (NEP) space test program is to launch an NEP satellite powered by the Russion Topaz 2 reactor by Dec. 1995. The primary goals of the NEP space test program are as follows: (1) demonstrate the feasibility of launching a space nuclear power system; (2) demonstrate and orbit adjust capability using NEP; (3) evaluate the in-orbit performance of the Topaz 2 reactor and selected electric thrusters; and (4) measure, analyze, and model the NEP self-induced environment. The discussion is presented in vugraph form.

Source record↗
NASA NTRS2017

Quantifying TOLNet Ozone Lidar Accuracy During the 2014 DISCOVER-AQ and FRAPPE Campaigns

The Tropospheric Ozone Lidar Network (TOLNet) is a unique network of lidar systems that measure high-resolution atmospheric profiles of ozone. The accurate characterization of these lidars is necessary to determine the uniformity of the network calibration. From July to August 2014, three lidars, the TROPospheric OZone (TROPOZ) lidar, the Tunable Optical Profiler for Aerosol and oZone (TOPAZ) lidar, and the Langley Mobile Ozone Lidar (LMOL), of TOLNet participated in the Deriving Information on Surface conditions from Column and Vertically Resolved Observations Relevant to Air Quality (DISCOVER-AQ) mission and the Front Range Air Pollution and Photochemistry Experiment (FRAPPA) to measure ozone variations from the boundary layer to the top of the troposphere. This study presents the analysis of the intercomparison between the TROPOZ, TOPAZ, and LMOL lidars, along with comparisons between the lidars and other in situ ozone instruments including ozonesondes and a P-3B airborne chemiluminescence sensor. The TOLNet lidars measured vertical ozone structures with an accuracy generally better than +/-15 % within the troposphere. Larger differences occur at some individual altitudes in both the near-field and far-field range of the lidar systems, largely as expected. In terms of column average, the TOLNet lidars measured ozone with an accuracy better than +/-5 % for both the intercomparison between the lidars and between the lidars and other instruments. These results indicate that these three TOLNet lidars are suitable for use in air quality, satellite validation, and ozone modeling efforts.

TOLNet↗
DOE OSTI2026

NeuDiff Agent: a governed AI workflow for single-crystal neutron crystallography

Large-scale facilities increasingly face analysis and reporting latency as a limiting step in scientific throughput, particularly for structural studies that require iterative reduction, integration, refinement and validation. To improve the time to result and analysis efficiency, NeuDiff Agent is introduced as a governed, tool-using AI workflow for TOPAZ at the Spallation Neutron Source. NeuDiff Agent takes instrument data through reduction, integration, refinement and validation to a validated crystal structure and a publication-ready CIF. NeuDiff Agent coordinates established crystallographic tools under explicit governance by restricting actions to allowlisted tools, enforcing fail-closed verification gates at key workflow boundaries, and capturing complete provenance for inspection, auditing and controlled replay. The present benchmark is limited to structural crystallography for periodic structures; magnetic structure analysis and incommensurate or superspace refinement are outside the scope of the current workflow. Performance is assessed using a fixed prompt protocol and repeated end-to-end runs with two large language model backends, with user and machine time partitioned and intervention burden and recovery behaviors quantified under gating. In a reference-case benchmark, NeuDiff Agent reduces wall time from 435 min (manual) to 86.5 ± 4.7 to 94.4 ± 3.5 min (4.6–5.0× faster) while producing a validated CIF with no checkCIF level A or B alerts. These results establish a practical route to deploy agentic AI in facility crystallography while preserving traceability and publication-facing validation requirements.

Xiao, Zhongcan [ORNL] (ORCID:0000000220761961)↗
DOE OSTI2024

Integrating ORNL’s HPC and Neutron Facilities with a Performance-Portable CPU/GPU Ecosystem

We explore the development of a performance-portable CPU/GPU ecosystem to integrate two of the US Department of Energy’s (DOE’s) largest scientific instruments, the Oak Ridge Leadership Computing facility and the Spallation Neutron Source (SNS), both of which are housed at Oak Ridge National Laboratory. We select a relevant data reduction workflow use-case to obtain the differential scattering cross-section from data collected by SNS’s CORELLI and TOPAZ instruments. We compare the current CPU-only production implementation using the Garnet Python multiprocess package based on the Mantid C++ framework against our proposed CPU/GPU implementation that uses the LLVM-based, just-in-time Julia scientific language and the JACC.jl performance-portable package. Two proxy apps were developed: (i) an app for extracting relevant Mantid kernels (MDNorm) in C++ and (ii) the Julia MiniVATES.jl miniapp. We present performance results for NVIDIA A100 and AMD MI100 GPUs and AMD EPYC 7513 and 7662 CPUs. The results provide insights for future generations of data reduction software that can embrace performance portability for an integrated research infrastructure across DOE’s experimental and computational facilities.

Hahn, Steven↗
DOE OSTI2023

A scalable transformer model for real-time decision making in neutron scattering experiments

The U.S. Department of Energy's (DOE's) neutron research facilities at Oak Ridge National Laboratory (ORNL), including the High Flux Isotope Reactor (HFIR) and the Spallation Neutron Source (SNS), are a state-of-the-art neutron scattering facility that allows researchers to study the structure and dynamics of materials at the atomic scale. At the SNS, neutrons are measured using the time-of-flight (TOF) technique as they move through a neutron beamline to interact with a sample. Large volumes of neutron scattering data are collected and recorded in neutron event mode. Optimal productivity of the TOF instrument is limited due to the lack of real-time data analysis tools. The large amount of data generated by the experiments can be challenging to process and analyze in real time, particularly for experiments that require rapid feedback and adjustment of experimental parameters. The regular computer/workstation cannot keep up with the experiment speed to provide real-time feedback to adjust experimental parameters, so connecting the supercomputers available to the neutron facility is necessary to achieve real-time data analysis and experiment steering. To address this challenge, we exploit the Frontier supercomputer at Oak Ridge Leadership Computing Facility (OLCF) to train a scalable temporal fusion transformer model for real-time decision making of TOF neutron scattering experimentation. Here, in this paper, we present the results using Frontier to provide the processing power needed to rapidly process and analyze large volumes of single-crystal diffraction data collected at TOPAZ, a neutron time-of-flight Laue single-crystal diffractometer at the SNS.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2020

The Opus radiative opacity code, a new implementation of the super-transition array method

This report describes the development of our new radiative opacity code Opus, submitted as part of a 2020 Level 2 milestone requirement. This code aims to incorporate the capabilities in existing but separate opacity codes previously developed at LLNL (Opal, Topaz, and Tycho). The first phase in the development, which was to implement the super-transition (STA) method of Bar-Shalom and co-workers is now completed. In this work, we describe the underlying physics, implementation, usage, and regression testing as well as providing numerical examples for the opacity tables of boron, chromium, iron, and nickel. The latter are benchmarked against the LLNL legacy STA code Tycho, with an average absolute relative difference of ~1.5 and 0.5% for Planck and Rosseland opacity means, respectively. The cases where differences are larger are well understood in terms of numerical instabilities near discontinuities of the average degree of ionization inherent to the assumed opacity/equation-of-state model.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗