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Guo, Yicheng

Publications and source records attributed to Guo, Yicheng.

11 records
All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

Changes in serum-neutralizing antibody potency and breadth post-SARS-CoV-2 mRNA vaccine boost

A better understanding of the durability and breadth of serum-neutralizing antibody responses against multiple severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) variants elicited by COVID-19 vaccines is crucial in addressing the current pandemic. In this study, we quantified the decay of serum neutralization antibodies (nAbs) after second and third doses of the original COVID-19 mRNA vaccine. Using an authentic virus-neutralization assay, we found that decay half-lives of WA1- and Delta-nAbs were both ~60 days after second and third vaccine dose. Unexpectedly, the durability of serum antibodies that neutralize three different Omicron subvariants (BA.1.1, BA.5, BA.2.12.1) was substantially better, with half-lives of ≥6 months. A booster dose of the original COVID-19 vaccine was also found to broaden antibody responses against SARS-CoV and four other sarbecoviruses, in addition to multiple SARS-CoV-2 strains. These findings suggest that repeated vaccinations with the COVID-19 vaccine may confer a degree of protection against future spillover of sarbecoviruses from animal reservoirs.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2022

An antibody class with a common CDRH3 motif broadly neutralizes sarbecoviruses

The devastation caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has made clear the importance of pandemic preparedness. To address future zoonotic outbreaks due to related viruses in the sarbecovirus subgenus, we identified a human monoclonal antibody, 10-40, that neutralized or bound all sarbecoviruses tested in vitro and protected against SARS-CoV-2 and SARS-CoV in vivo. Comparative studies with other receptor-binding domain (RBD)–directed antibodies showed 10-40 to have the greatest breadth against sarbecoviruses, suggesting that 10-40 is a promising agent for pandemic preparedness. Moreover, structural analyses on 10-40 and similar antibodies not only defined an epitope cluster in the inner face of the RBD that is well conserved among sarbecoviruses but also uncovered a distinct antibody class with a common CDRH3 motif. Our analyses also suggested that elicitation of this class of antibodies may not be overly difficult, an observation that bodes well for the development of a pan-sarbecovirus vaccine.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2022

Clump survival and migration in VDI galaxies: an analytical model versus simulations and observations

ABSTRACT We address the nature of the giant clumps in high-z galaxies that undergo violent disc instability, distinguishing between long-lived and short-lived clumps. We study the evolution of long-lived clumps during migration through the disc via an analytical model tested by simulations and confront theory with CANDELS-HST observations. The clump ‘bathtub’ model, which considers gas and stellar gain and loss, involves four parameters: the accretion efficiency α, the star formation rate (SFR) efficiency ϵd, and the outflow mass-loading factors for gas and stars, η and ηs. The corresponding time-scales are comparable to the migration time, two-three orbital times. The accretion-rate dependence on clump mass, gas, and stars, allows an analytical solution involving exponential growing and decaying modes. For the fiducial parameter values there is a main evolution phase where the SFR and gas mass are constant and the stellar mass is rising linearly with time. This makes the inverse specific SFR an observable proxy for clump age. When η or ϵd are high, or α is low, the decaying mode induces a decline of SFR and gas mass till the migration ends. Later, the masses and SFR approach an hypothetical exponential growth with a constant specific SFR. The model matches simulations with different, moderate feedbacks, both in isolated and cosmological settings. The observed clumps agree with our predictions, indicating that the massive clumps are long-lived and migrating. A challenge is to model feedback that is non-disruptive in massive clumps but suppresses SFR to match the galactic stellar-to-halo mass ratio.

Dekel, Avishai↗
DOE OSTI2020

VRC34-Antibody Lineage Development Reveals How a Required Rare Mutation Shapes the Maturation of a Broad HIV-Neutralizing Lineage

Rare mutations have been proposed to restrict the development of broadly neutralizing antibodies against HIV-1, but this has not been explicitly demonstrated. We hypothesized that such rare mutations might be identified by comparing broadly neutralizing and non-broadly neutralizing branches of an antibody-developmental tree. Because sequences of antibodies isolated from the fusion peptide (FP)-targeting VRC34-antibody lineage suggested it might be suitable for such rare mutation analysis, we carried out next-generation sequencing (NGS) on B cell transcripts from donor N123, the source of the VRC34 lineage, and functionally and structurally characterized inferred intermediates along broadly neutralizing and poorly neutralizing developmental branches. The broadly neutralizing VRC34.01 branch required the rare heavy-chain mutation Y33P to bind FP, whereas the early bifurcated VRC34.05 branch did not require this rare mutation and evolved less breadth. Our results demonstrate how a required rare mutation can restrict development and shape the maturation of a broad HIV-1-neutralizing antibody lineage.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

Structural and stellar-population properties versus bulge types in Sloan Digital Sky Survey central galaxies

ABSTRACT This paper studies pseudo-bulges (P-bulges) and classical bulges (C-bulges) in Sloan Digital Sky Survey (SDSS) central galaxies using the new bulge indicator ΔΣ1, which measures relative central stellar-mass surface density within 1 kpc. We compare ΔΣ1 to the established bulge-type indicator Δ〈μe〉 from Gadotti (2009) and show that classifying by ΔΣ1 agrees well with Δ〈μe〉. ΔΣ1 requires no bulge–disc decomposition and can be measured on SDSS images out to z = 0.07. Bulge types using it are mapped on to 20 different structural and stellar-population properties for 12 000 SDSS central galaxies with masses 10.0 < log M*/M⊙ < 10.4. New trends emerge from this large sample. Structural parameters show fairly linear log–log relations versus ΔΣ1 and Δ〈μe〉 with only moderate scatter, while stellar-population parameters show a highly non-linear ‘elbow’ in which specific star formation rate remains roughly flat with increasing central density and then falls rapidly at the elbow, where galaxies begin to quench. P-bulges occupy the low-density end of the horizontal arm of the elbow and are universally star forming, while C-bulges occupy the elbow and the vertical branch and exhibit a wide range of star formation rates at a fixed density. The non-linear relation between central density and star formation rate has been seen before, but this mapping on to bulge class is new. The wide range of star formation rates in C-bulges helps to explain why bulge classifications using different parameters have sometimes disagreed in the past. The elbow-shaped relation between density and stellar indices suggests that central structure and stellar populations evolve at different rates as galaxies begin to quench.

Luo, Yifei↗
NASA NTRS2013

Candels Multi-Wavelength Catalogs: Source Detection and Photometry in the Goods-South Field

We present a UV to mid-infrared multi-wavelength catalog in the CANDELS/GOODS-S field, combining the newly obtained CANDELS HST/WFC3 F105W, F125W, and F160W data with existing public data. The catalog is based on source detection in the WFC3 F160W band. The F160W mosaic includes the data from CANDELS deep and wide observations as well as previous ERS and HUDF09 programs. The mosaic reaches a 5σ limiting depth (within an aperture of radius 0farcs17) of 27.4, 28.2, and 29.7 AB for CANDELS wide, deep, and HUDF regions, respectively. The catalog contains 34,930 sources with the representative 50% completeness reaching 25.9, 26.6, and 28.1 AB in the F160W band for the three regions. In addition to WFC3 bands, the catalog also includes data from UV (U band from both CTIO/MOSAIC and VLT/VIMOS), optical (HST/ACS F435W, F606W, F775W, F814W, and F850LP), and infrared (HST/WFC3 F098M, VLT/ISAAC Ks, VLT/HAWK-I Ks, and Spitzer/IRAC 3.6, 4.5, 5.8, 8.0 μm) observations. The catalog is validated via stellar colors, comparison with other published catalogs, zero-point offsets determined from the best-fit templates of the spectral energy distribution of spectroscopically observed objects, and the accuracy of photometric redshifts. The catalog is able to detect unreddened star-forming (passive) galaxies with stellar mass of 10(exp 10) M(sub ☉) at a 50% completeness level to z ~ 3.4 (2.8), 4.6 (3.2), and 7.0 (4.2) in the three regions. As an example of application, the catalog is used to select both star-forming and passive galaxies at z ~ 2-4 via the Balmer break. It is also used to study the color-magnitude diagram of galaxies at 0 < z < 4.

CATALOGS↗
NASA NTRS2012

Extreme Emission Line Galaxies in CANDELS: Broad-Band Selected, Star-Bursting Dwarf Galaxies at Z greater than 1

We identify an abundant population of extreme emission line galaxies (EELGs) at redshift z approx. 1.7 in the Cosmic Assembly Near-IR Deep Extragalactic Legacy Survey (CANDELS) imaging from Hubble Space Telescope/Wide Field Camera 3 (HST/WFC3). 69 EELG candidates are selected by the large contribution of exceptionally bright emission lines to their near-infrared broad-band magnitudes. Supported by spectroscopic confirmation of strong [OIII] emission lines . with rest-frame equivalent widths approx. 1000A in the four candidates that have HST/WFC3 grism observations, we conclude that these objects are galaxies with approx.10(exp 8) Solar Mass in stellar mass, undergoing an enormous starburst phase with M*/M* of only approx. 15 Myr. These bursts may cause outflows that are strong enough to produce cored dark matter profiles in low-mass galaxies. The individual star formation rates and the co-moving number density (3.7x10(exp -4) Mpc(sup -3) can produce in approx.4 Gyr much of the stellar mass density that is presently contained in 10(exp 8) - 10(exp 9) Solar Mass dwarf galaxies. Therefore, our observations provide a strong indication that many or even most of the stars in present-day dwarf galaxies formed in strong, short-lived bursts, mostly at z > 1.

vanderWel, A.↗
NASA NTRS2010

The Morphology of Passively Evolving Galaxies at Z approximately 2 from HST/WFC3 Deep Imaging in the Hubble Ultradeep Field

We present near-IR images of six passive galaxies (SSFR< 10(exp -2)/ Gyr) at redshift 1.3 < z < 2.4 with stellar mass M approximately 10(exp 11) solar M, selected from the Great Observatories Origins Deep Survey (GOODS), obtained with the Hubble Space Telescope (HST) and the WFC3/IR camera. These images provide the deepest and highest angular resolution view of the optical rest-frame morphology of such systems to date. We find that the light profile of these galaxies is generally regular and well described by a Sersic model with index typical of today's spheroids. We confirm the existence of compact and massive early-type galaxies at z approximately 2: four out of six galaxies have r(sub e) approximately 1 kpc or less. The images reach limiting surface brightness mu approximates 26.5 mag/square arcsec in the F160W bandpass; yet there is no evidence of a faint halo in the galaxies of our sample, even in their stacked image. We also find very weak "morphological k-correction" in the galaxies between the rest-frame UV (from the ACS z-band), and the rest-frame optical (WFC3 H-band): the visual classification, Sersic indices and physical sizes of these galaxies are independent or only mildly dependent on the wavelength, within the errors. The presence of an active nucleus is suspected in two out of six galaxies (33%), opening the intriguing possibility that a large, presently unaccounted population of AGN is hosted in these galaxies, possibly responsible for the cessation of star formation.

Cassata, P.↗
NASA NTRS2009

The Morphology of Passively Evolving Galaxies at Z-2 from HST/WFC3 in the Hubble Ultra Deep Field

We discuss near-IR images of six passive galaxies (SSFR< 10(exp -2)/Gyr) at redshift 1.3 < z < 2.4 with stellar mass M approx 10(exp 11) solar mass, selected from the Great Observatories Origins Deep Survey (GOODS), obtained with WFC3/IR and the Hubble Space Telescope (HST). These WFC3 images provide the deepest and highest angular resolution view of the optical rest-frame morphology of such systems to date. We find that the light profile of these; galaxies is generally regular and well described by a Sersic model with index typical of today's spheroids. We confirm the existence of compact and massive early-type galaxies at z approx. 2: four out of six galaxies have T(sub e) approx. 1 kpc or less. The WFC3 images achieve limiting surface brightness mu approx. 26.5 mag/sq arcsec in the F160W bandpass; yet there is no evidence of a faint halo in the five compact galaxies of our sample, nor is a halo observed in their stacked image. We also find very weak "morphological k-correction" in the galaxies between the rest-frame UV (from the ACS z band), and the rest-frame optical (WFC3 H band): the visual classification, Sersic indices and physical sizes of these galaxies are independent or only mildly dependent on the wavelength, within the errors.

Cassata, P.↗