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DOE OSTI · 1904690

Multiplex base editing to convert $\mathrm{TAG}$ into $\mathrm{TAA}$ codons in the human genome

Chen, Yuting·Hysolli, Eriona·Chen, Anlu·Casper, Stephen·Liu, Songlei·Yang, Kevin·Liu, Chenli·Church, George
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Abstract

Whole-genome recoding has been shown to enable nonstandard amino acids, biocontainment and viral resistance in bacteria. Here we take the first steps to extend this to human cells demonstrating exceptional base editing to convert TAG to TAA for 33 essential genes via a single transfection, and examine base-editing genome-wide (observing ~40 C-to-T off-target events in essential gene exons). We also introduce GRIT, a computational tool for recoding. This demonstrates the feasibility of recoding, and highly multiplex editing in mammalian cells.

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59 BASIC BIOLOGICAL SCIENCESCRISPR-Cas systemssynthetic biology

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Chen, Yuting, Hysolli, Eriona, Chen, Anlu, Casper, Stephen, Liu, Songlei, Yang, Kevin, Liu, Chenli, Church, George. 2022-08-02. Multiplex base editing to convert $\mathrm{TAG}$ into $\mathrm{TAA}$ codons in the human genome. https://doi.org/10.1038/s41467-022-31927-8

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