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Draft Genome Sequences of 10 Pseudomonas sp. Isolates from the Active Layer of Permafrost in Ny Ålesund, Svalbard, Norway
Ten distinct isolates from the genus Pseudomonas were isolated in culture. The genomes of these isolates were sequenced using the Illumina MiSeq platform and assembled in order to provide insight into the metabolic and carbon-degrading potential of bacteria residing in soils at high latitudes.
Using culture‐independent methods to link active compound‐specific carbon degradation to greenhouse gas production and recycling in natural populations of permafrost microbes
Under this project we conducted one scouting field trip (2019) and two fieldworks (2021, 2022) in Ny-Alesund, Svalbard. The project supported seven PhD students, six undergraduate research assistants, three Postdoctoral research associates and one Research Professor. The project supported travel and fieldwork for three international students. This project has produced 49 conference presentations/posters, 18 peer-reviewed journal articles published at time of preparation of this report, while 6 journal articles are still at different stages of review process, 1 outreach website and 2 YouTube videos. In addition, the PIs gave many seminars to other universities and research institutions.
Biotic and Environmental Drivers of Plant Microbiomes Across a Permafrost Thaw Gradient
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Reducing uncertainty in simulations of thaw in ice-rich permafrost
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Topography drives variability in circumpolar permafrost thaw pond expansion
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Basin-scale investigations of topographic influence on permafrost thaw in ice wedge-affected landscapes
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Nutrients Alter Methane Production and Oxidation in a Thawing Permafrost Mire
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A living bdelloid rotifer from 24,000-year-old Arctic permafrost
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Water and carbon fluxes from a supra-permafrost aquifer to a stream across hydrologic states
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Plant organic matter inputs exert a strong control on soil organic matter decomposition in a thawing permafrost peatland
Peatlands are climate critical carbon (C) reservoirs that could become a C source under continued warming. A strong relationship between plant tissue chemistry and the soil organic matter (SOM) that fuels C gas emissions is inferred, but rarely examined at the molecular level. Here we compared Fourier transform infrared (FT-IR) spectroscopy measurements of solid phase functionalities in plants and SOM to ultra-high-resolution mass spectrometric analyses of plant and SOM water extracts across a palsa-bog-fen thaw and moisture gradient in an Arctic peatland. From these analyses we calculated the C oxidation state (NOSC), a measure which can be used to assess organic matter quality. Palsa plant extracts had the highest NOSC, indicating high quality, whereas extracts of Sphagnum, which dominated the bog, had the lowest NOSC. The percentage of plant compounds that are less bioavailable and accumulate in the peat, increases from palsa (25%) to fen (41%) to bog (47%), reflecting the pattern of percent Sphagnum cover. The pattern of NOSC in the plant extracts was consistent with the high number of consumed compounds in the palsa and low number of consumed compounds in the bog. However, in the FT-IR analysis of the solid phase bog peat, carbohydrate content was high implying high quality SOM. Here, we explain this discrepancy as the result of low solubilization of bog SOM facilitated by the low pH in the bog which makes the solid phase carbohydrates less available to microbial decomposition. Plant-associated condensed aromatics, tannins, and lignin-like compounds declined in the unsaturated palsa peat indicating decomposition, but lignin-like compounds accumulated in the bog and fen peat where decomposition was presumably inhibited by the anaerobic conditions. A molecular-level comparison of the aboveground C sources and peat SOM demonstrates that climate-associated vegetation shifts in peatlands are important controls on the mechanisms underlying changing C gas emissions.
Microbiome–metabolite linkages drive greenhouse gas dynamics over a permafrost thaw gradient
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Quantifying the inhibitory impact of soluble phenolics on anaerobic carbon mineralization in a thawing permafrost peatland
The mechanisms controlling the extraordinarily slow carbon (C) mineralization rates characteristic of Sphagnum -rich peatlands (“bogs”) are not fully understood, despite decades of research on this topic. Soluble phenolic compounds have been invoked as potentially significant contributors to bog peat recalcitrance due to their affinity to slow microbial metabolism and cell growth. Despite this potentially significant role, the effects of soluble phenolic compounds on bog peat C mineralization remain unclear. We analyzed this effect by manipulating the concentration of free soluble phenolics in anaerobic bog and fen peat incubations using water-soluble polyvinylpyrrolidone (“PVP”), a compound that binds with and inactivates phenolics, preventing phenolic-enzyme interactions. CO 2 and CH 4 production rates (end-products of anaerobic C mineralization) generally correlated positively with PVP concentration following Michaelis-Menten (M.M.) saturation functions. Using M.M. parameters, we estimated that the extent to which phenolics inhibit anaerobic CO 2 production was significantly higher in the bog—62 ± 16%—than the fen—14 ± 4%. This difference was found to be more substantial with regards to methane production—wherein phenolic inhibition for the bog was estimated at 54 ± 19%, while the fen demonstrated no apparent inhibition. Consistent with this habitat difference, we observed significantly higher soluble phenolic content in bog vs. fen pore-water. Together, these findings suggest that soluble phenolics could contribute to bogs’ extraordinary recalcitrance and high (relative to other peatland habitats) CO 2 :CH 4 production ratios.
Probabilistic Predictions of Offshore Gas Hydrate and Submarine Permafrost Distribution Along the Alaskan North Slope.
Abstract not provided.
A thermo-mechanical model of permafrost for the simulation of Arctic coastal erosion.
Abstract not provided.
Demonstration of the ACE (Arctic Coastal Erosion) model at Drew Point, AK during a permafrost bluff block collapse event in summer 2018.
Abstract not provided.