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At least 199 records · Page 11

The Arctic

The Arctic environment in 2024 continued on a trajectory that has put it in a state far different from that of the twentieth century. Ongoing accumulation of greenhouse gases in the atmosphere continues to quickly warm the Arctic, resulting in rapid changes in the cryosphere that are driving cascading impacts to climate, ecological, and societal systems. Many weather- and climate-related impacts in the Arctic are the result of compounding change, such as increased riverbank erosion, which is proximately due to increased river discharge from higher seasonal precipitation, yet is also exacerbated by thawing permafrost. However, even individual storms occur within very different ocean and ice conditions than were typically present in the late twentieth century. As a result, the impacts, including high winds, excessive precipitation, and coastal inundation, may be quite different nowadays, as exemplified by the October 2024 storm in northwest Alaska that produced severe coastal flooding in several communities. To share some of these impacts with a wider audience, select extreme weather impacts around the greater Arctic have been highlighted through the inclusion of sidebars in recent State of the Climate Arctic chapters (e.g., Benestad et al. 2023; Thoman et al. 2024).

Thoman, Richard L. [Univ. of Alaska, Fairbanks, AK↗

H2A.X promotes endosperm-specific DNA methylation in Arabidopsis thaliana

Background: H2A.X is an H2A variant histone in eukaryotes, unique for its ability to respond to DNA damage, initiating the DNA repair pathway. H2A.X replacement within the histone octamer is mediated by the FAcilitates Chromatin Transactions (FACT) complex, a key chromatin remodeler. FACT is required for DEMETER (DME)-mediated DNA demethylation at certain loci in Arabidopsis thaliana female gametophytes during reproduction. Here, we sought to investigate whether H2A.X is involved in DME- and FACT-mediated DNA demethylation during reproduction. Results: H2A.X is encoded by two genes in Arabidopsis genome, HTA3 and HTA5. We generated h2a.x double mutants, which displayed a normal growth profile, whereby flowering time, seed development, and root tip organization, S-phase progression and proliferation were all normal. However, h2a.x mutants were more sensitive to genotoxic stress, consistent with previous reports. H2A.X fused to Green Fluorescent Protein (GFP) under the H2A.X promoter was highly expressed especially in newly developing Arabidopsis tissues, including in male and female gametophytes, where DME is also expressed. We examined DNA methylation in h2a.x developing seeds and seedlings using whole genome bisulfite sequencing, and found that CG DNA methylation is decreased genome-wide in h2a.x mutant endosperm. Hypomethylation was most striking in transposon bodies, and occurred on both parental alleles in the developing endosperm, but not the embryo or seedling. h2a.x-mediated hypomethylated sites overlapped DME targets, but also included other loci, predominately located in heterochromatic transposons and intergenic DNA. Conclusions: Our genome-wide methylation analyses suggest that H2A.X could function in preventing access of the DME demethylase to non-canonical sites. Overall, our data suggest that H2A.X is required to maintain DNA methylation homeostasis in the unique chromatin environment of the Arabidopsis endosperm.

59 BASIC BIOLOGICAL SCIENCES↗

Dataset for First Full Dalitz Plot Measurement in Neutron β-Decay using the Nab Spectrometer and Implications for New Physics

The Nab apparatus at the Fundamental Neutron Physics Beamline at the Spallation Neutron Source was designed to measure key observations in neutron beta decay, test the Standard Model's description of the weak interaction, and search for new physics. This data was collected using the Nab apparatus and are presented in the article "First Full Dalitz Plot Measurement in Neutron β-Decay using the Nab Spectrometer and Implications for New Physics." This data publication includes CSV (comma-separated values) files which are used to generate Figures 3 - 11 in the linked journal article.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Search for Mirror Neutron Oscillations

Data taken using the Magnetism Reflectometer at the Spallation Neutron Source, used in the proposal Titled: Search for Mirror Neutron Oscillations

ASTRONOMY AND ASTROPHYSICS↗

Search for Mirror Neutron Oscillations

Data taken using the Magnetism Reflectometer at the Spallation Neutron Source, used in the proposal Titled: Search for Mirror Neutron Oscillations

ASTRONOMY AND ASTROPHYSICS↗

Exergetic design and analysis of a freeze-out heat exchanger for helium purification

The freeze-out purification process is very effective in removing moisture contamination and can be utilised for purification of helium gas in cryogenic applications. A process model for a freeze-out helium purifier (up to 30 g/s of contaminated helium at 10 ppmv) with a coiled finned-tube heat exchanger is developed. Furthermore, an extensive 1st and 2nd law (exergy) analysis is carried out and the exergetically optimal heat exchanger configuration (diameter and number of flow passes) for a given heat exchanger surface area ranging from 42.5 m 2 to 57.5 m 2 are found.

cryogenics↗

Conifer water use patterns in the East River Watershed, Colorado US, based on stable water isotopes and cellulose isotopes

This data package contains a series of datasets aimed at understanding the seasonal origins of water used by the dominant conifer species, Abies lasiocarpa and Picea engelmannii, in the East River Watershed. There is a distinct difference in the stable isotopic ratio of summer rain and snowpack and thus by tracking the isotopic ratio of the xylem water in trees, it is possible to separate when a tree is using snow vs. summer rain. Following typical protocols, we sampled and extracted water from soils in the "Research Meadow" near Gothic, CO within the East River Watershed through the 2016 growing season. The stable isotopic ratio of these waters were then measured. Using values of the isotopic ratio of precipitation and snowpack from that season, we develop a mixing model to show how the trees transitioned from use of snowpack to summer in late July. We extended the information on the seasonal origins of water from 2016 back until 1980 by using measurements of the isotopic ratio of cellulose from trees in the Research Meadow. The isotopic ratio of tree ring cellulose records a signal both of the Vapor Pressure Deficit at the leaf-atmosphere boundary and also the source water for the trees. We concluded from this extended analysis that the trees underwent transitions between periods where snow was the dominant water source and summer rain was the dominant water source. More details on this analysis can be found in the publication: Persistence and Plasticity in Conifer Water Use Strategies. JGR Biogeoscience. DOI 10.1029/2018JG004845. The dataset specifically includes stable isotope measurements of xylem and soil water for Spruce and Fir trees at the Rocky Mountain Biological Lab's Research Meadow as well as snowpack and precipitation stable isotopes from nearby National Atmospheric Deposition Program sites. Associated meteorological data is included, which is needed to understand the source water for the trees based on the cellulose measurements.This dataset was updated in June 2021 also include intra-ring measurements of the d18O and d13C of cellulose these same species of trees at the Ziegler Reservoir site in Snowmass, CO. These are listed as files: "Interglaciald18OCellulose.csv", "Interglaciald13OCellulose.csv" and "Modernd13CCellulose.csv". The intent of these measurements was to assess whether common conifers (abies and picea) had undergone ecophysiological or ecohydrological changes during the last period in Earth's history was warmer than today, i.e. the last Interglacial (116,000 to 130,000 years ago). This site was chosen because it is a location where subfossil wood from this critical warm period was discovered. We measured the d18O and d13C of the subfossil trees following the same protocol as the modern samples which included chemical extraction of cellulose and isotope ratio mass spectrometry. We found that the trees showed little difference in water use efficiency but utilized more summer rain during the interglacial period. This analysis and detailed methods are provided in the following manuscript: Wetter summers mitigated temperature stress on Rocky Mountain forests during the last interglacial warm period which is in revision at GRL but is available as a preprint here: 10.1002/essoar.10506740.2

54 ENVIRONMENTAL SCIENCES↗

The Pan-Arctic Vegetation Cover (PAVC) database v1.1

The Pan-Arctic Vegetation Cover (PAVC) database contains synthesized field-data observations of vegetation cover from 978 Arctic Alaska plots with observations from 2010 to 2021. The cover datasets contain plot data at both the plant functional type (PFT) and species-level resolution, with standardized PFT definitions and species names. We synthesized publicly available point-intercept and visual estimate plots from the Arctic Vegetation Archive of Alaska, the Alaska Vegetation Plots Database, the North Slope Science Catalog, and the National Ecological Observatory Network; as well as previously unpublished data from the Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic).Users will find four synthesized datasets, 4 associated data descriptor (dd) files, and 1 metadata file in the PAVC database:synthesized_species_fcover.csv contains fractional cover (fcover) for unique accepted species names, where names include vegetation identified at the family, genus, species, subspecies, and variety levels, as well as general functional types across all 5 data sources. The synthesized_species_fcover_dd.csv accompanies this dataset with header information.synthesized_pft_fcover.csv contains fcover for the following PFTs: non-vascular plants with lichen and bryophyte subcategories, trees with deciduous and evergreen subcategories, shrubs with deciduous and evergreen subcategories, graminoids (grasses), and forbs (herbaceous flowering plants) measured as total cover. Litter and “other” cover are also included as total cover. Additional “types” include water and bare ground, which were measured as top cover. The synthesized_pft_fcover_dd.csv accompanies this dataset with header information.species_pft_checklist.csv is a lookup table containing the translation from a dataset species name to an accepted species name and to a PFT. This table can be used to clarify our species to PFT adjudications, and to aid users in assigning their own PFTs. Any issues found in this checklist should be reported in the Issues tab of our github.survey_unit_information.csv contains auxiliary information about the plots synthesized in this database. It contains useful information for filtering plots of interest based on temporal, geospatial, and contextual information about the plot surveys.flmd.csv contains metadata information about each file in the database.This research was performed as a part of the NGEE Arctic project. The NGEE Arctic project was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research.The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska.Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).

54 ENVIRONMENTAL SCIENCES↗

SKS Polarization Anomalies Due to the Coriolis Force

The Earth’s Coriolis force has been well–known to impact surface waves and normal modes, which is essential to accurately interpret these waves. However, the Coriolis force on body waves has been assumed to be negligible and mostly ignored. It has been previously shown that the Coriolis force impacts polarizations of shear waves, whereas the wavefronts remain unaffected. We expand on the potential influences of Earth’s Coriolis force on shear–wave polarization measurements by conducting 3D numerical simulations for elastic waves generated by earthquake and explosive sources in a radially symmetric, and 3D mantle and crustal models. The Coriolis force can produce polarization anomalies of mantle shear waves up to 7° and core phases, such as SKS and SKKS, up to 4°. Uncorrected shear–wave polarizations due to the Coriolis force can cause an additional source of error (5°–10° in fast direction, and 0.2–0.3 s delay time depending on the method and seismic phase), inaccurate interpretation of station misalignments, and imprecise estimates of the core–mantle boundary topography. We show how to correct for the Coriolis force on teleseismic shear waves using 1D ray tracing for well–isolated phases. Here, we recommend the use of full waveform simulations to accurately account for earthquake sources parameters, poorly isolated phases that could include interfering phase arrivals within the measurement time window, and the effect of the Coriolis force on the polarizations of shear waves.

58 GEOSCIENCES↗

Equations of state, phase relations, and oxygen fugacity of the Ru-RuO 2 buffer at high pressures and temperatures

Experimental studies and measurements of inclusions in diamonds show that ferric iron components are increasingly stabilized with depth in the mantle. To determine the thermodynamic stability of such components, their concentration needs to be measured at known oxygen fugacities. The metal-oxide pair Ru and RuO 2 are ideal as an internal oxygen fugacity buffer in high-pressure experiments. Both phases remain solid to high temperatures and react minimally with silicates, only exchanging oxygen. To calculate oxygen fugacities at high pressure and temperature, however, requires information on the phase relations and equation of state properties of the solid phases. We have made in situ synchrotron X-ray diffraction measurements in a multi-anvil press on mixtures of Ru and RuO 2 to 19.4 GPa and 1473 K with which we have determined phase relations of the RuO 2 phases and derived thermal equations of state (EoS) parameters for both Ru and RuO 2 . Rutile-structured RuO 2 was found to undergo two phase transformations, first at ~7 GPa to an orthorhombic structure and then above 12 GPa to a cubic structure. The phase boundary of the cubic phase was constrained for the first time at high pressure and temperature. We have derived a continuous Gibbs free energy expression for the tetragonal and orthorhombic phases of RuO 2 by fitting the second-order phase transition boundary and P-V-T data for both phases, using a model based on Landau theory. The transition between the orthorhombic and cubic phases was then used along with EoS terms derived for both phases to determine a Gibbs free energy expression for the cubic phase. We have used these data to calculate the oxygen fugacity of the Ru + O 2 = RuO 2 equilibrium, which we have parameterized as a single polynomial across the stability fields of all three phases of RuO 2 . The expression is log 10 f O 2 (Ru – RuO 2 ) = (7.782 – 0.00996P + 0.001932P 2 – 3.76 × 10 –5 P 3 ) + (–13 763 + 592P – 3.955P 2 )/T + (–1.05 × 10 6 – 4622P)/T 2 , which should be valid from room pressure up to 25 GPa and 773–2500 K, with an estimated uncertainty of 0.2 log units. Our calculated fO 2 is shown to be up to 1 log unit lower than estimates that use previous expressions or ignore EoS terms.

Armstrong, Katherine↗

The influence of Al2O3 on the structural properties of MgSiO3 akimotoite

Abstract Akimotoite, a MgSiO3 polymorph present in the lower transition zone within ultramafic portions of subducting slabs and potentially also in the ambient mantle, will partition some amount of Al, raising the question of how this will affect its crystal structure and properties. In this study, a series of samples along the MgSiO3-Al2O3 (akimotoite-corundum) solid solution have been investigated by means of single-crystal X-ray diffraction to examine their crystal chemistry. Results show a strong nonlinear behavior of the a- and c-axes as a function of Al content, which arises from fundamentally different accommodation mechanisms in the akimotoite and corundum structures. Furthermore, two Al2O3-bearing akimotoite samples were investigated at high pressure to determine the different compression mechanisms associated with Al substitution. Al2O3-bearing akimotoite becomes more compressible at least up to 20 mol% Al2O3, due likely to an increase in compressibility as the Al cation is incorporated into the SiO6 octahedron. This observation is in strong contrast to the stiffer corundum end-member having a KT = 250 GPa, which is larger than that of the akimotoite end-member [KT = 205(1) GPa]. These findings have implications for mineral physics models of elastic properties, which have in the past assumed linear mixing behavior between the MgSiO3 akimotoite and Al2O3 corundum end-members to calculate sound wave velocities for Al-bearing akimotoite at high pressure and temperature.

Geochemistry & Geophysics↗

A Replacement Cold Neutron Guide System for HFIR (Conceptual Design Report)

The design of a replacement cold neutron guide system for the High Flux Isotope Reactor (HFIR) is presented. The proposed six-channel design uses the latest technologies and is optimally designed to account for operational and site constraints. These include the design of the cold source and the beam tube, the size and shape of the penetrations in the reactor confinement boundary, and the shape and orientation of the guide hall. The existing user instruments are a macromolecular diffractometer (IMAGINE), an IMAGING station, two small-angle neutron scattering (SANS) instruments (Bio-SANS and GP-SANS), and a cold triple-axis spectrometer (C-TAX). These instruments will all be reinstalled at end-of-guide positions with improved performance, and a position for a new high-performance neutron spin echo instrument will be created. The proposed guide design requires an extension to the guide hall toward the south. The calculated flux gain for a typical experiment is between a factor of 1.3 and 3 for all instruments, with the exception of the C-TAX instrument, which stands to gain a factor of >30 in flux at the sample. The new guide system will also offer additional performance gains, such as an increase in Q-range on Bio-SANS. The stated performance gains do not take into account any potential performance gains resulting from renewal and realignment of the guide system. The design of the guide system in the common sections up to about 25 m from the source is considered to be complete and ready for engineering design, while the designs of the instrument-specific guides are in some cases still a work in progress. The present report describes the current status of those designs.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Ray-Tracing Simulations Characterising the Performance of the Proposed 2024 HFIR HB4 Main Shutter

The Main Shutter at HB4 will serve two purposes after the HFIR Beryllium Reflector Replacement planned to take place in 2024. First as the primary certified safety control controlling the passage of neutrons from the cold source in the HFIR pressure vessel into the cold guide hall, and second as the first set of reflecting surfaces used to guide neutrons from the source and into the individual guide starts for each instrument in the cold guide hall.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Implementation and Demonstration of P4 Software for Improving ICS Protocol Visibility and Control [Slides]

No prior enabling funded work applicable to this proposal. Programming Protocol-independent Packet Processors (P4) is an open source, domain-specific programming language for network switching devices. P4 complements traditional Software Defined Networking (SDN) which is primarily concerned with the management of packets (e.g. routing/dropping decisions) rather than how each packet is processed. The introduction of P4 provided new capabilities (e.g. firewall, load balancing, enhanced security) but has primarily been deployed in data centers. This effort investigates ways to expand P4 into other niches such as ICS networks.

97 MATHEMATICS AND COMPUTING↗

CERBERUS: A Multi-Purpose Spectrometer and Alignment Station at SNS

In order to maximally utilize the existing beam ports at the Spallation Neutron Source, development and installation of a new neutron instrument is proposed at beam port 16a within building 8700 at Oakridge National Laboratory. Said instrument will provide nominally equal neutron beam access for three main science purposes; (1) as an alignment station for proposed single-crystal spectrometer samples to be run across the facility, (2) as a Near-Infrared (>100meV) filter analyzer spectrometer, nearly identical to that which was previously housed at the Lujan Center in Los Alamos, and (3) as a high-throughput nuclear cross-section measurement station. These three experimental applications would require no substantial technical developments, are complimentary in their technical requirements, and provide a worth-while capability that is infinitely beyond the current use of the 16a beam port at the First Target Station within the SNS complex. All three methods would enhance the facility’s science contributions, while accommodating two niche experiment methods that may not be strong enough to stand on their own.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗