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At least 217 records · Page 12

Kinetic modeling of hot tail runaway electron generation during plasma disruptions using the JOREK code

The generation of runaway electrons (REs) during disruptions poses a significant challenge for the operation of tokamaks. The production of these high-energy electrons can cause substantial damage, particularly when the plasma current is high, making it a critical concern for ITER. For the high-temperature plasmas anticipated in ITER, the primary generation of REs may be dominated by the hot tail mechanism, which consists of the acceleration of hot electrons from the pre-disruption population which have not yet thermalized with the bulk following the rapid cooling of the plasma. To account for the significant 3D effects on RE production, a hot tail modeling framework has been developed within the non-linear 3D extended MHD code JOREK. This paper presents the structure of this framework, which is based on test electrons evolving in MHD fields. The verification of the method shows good agreement with the reference DREAM code for 0D test cases, as well as for axisymmetric simulations of 15 MA ITER H-mode disruption scenarios. Furthermore, a proof-of-principle application to a DIII-D case demonstrates the framework’s capability to capture for the first time the hot tail generation in 3D MHD simulations in realistic geometry. Preliminary results suggest that the production of REs is significantly reduced by stochastic losses.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Advances in 3D transient plasma dynamics and control through MHD and hybrid fluid-kinetic simulations with JOREK

Transient phenomena and their control are of high relevance in magnetic confinement fusion plasmas to guarantee a stable and safe plasma operation. Interpretative simulations can maximize the insights gained from experiments on present machines and predictive simulations can help in the preparation of design, mitigation techniques and operational scenarios for future devices. In this article, we provide an overview of recent advances and novel scientific results obtained with the 3D non-linear hybrid fluid-kinetic code JOREK, covering physics of plasma transients from the core to the scrape-off layer (SOL) both for tokamak and stellarator devices. Substantial progress was made in the physics understanding, model validation with experiments and experiment interpretation, thus, giving confidence for predictions to devices like DTT, ITER and DEMO. The topics addressed comprise a wide range: the edge physics of new operation scenarios and edge localized mode suppression; major disruptions with a focus on runaway electrons and vertical displacement events as well as disruption mitigation by shattered pellet injection; the physics mechanisms and operational limits of the flux pumping regime for sawtooth control; MHD limits of stellarators and work towards incorporating advanced edge/SOL/exhaust dynamics; continuing improvements of the code for more efficient hybrid simulations on conventional and accelerated high performance computing architectures.

disruptions↗

Benchmarking the performance of a high-Q cavity qudit using random unitaries

High-coherence cavity resonators are excellent resources for encoding quantum information in higher-dimensional Hilbert spaces, moving beyond traditional qubit-based platforms. A natural strategy is to use the Fock basis to encode information in qudits. One can perform quantum operations on the cavity mode qudit by coupling the system to a non-linear ancillary transmon qubit. However, the performance of the cavity-transmon device is limited by the noisy transmons. It is, therefore, important to develop practical benchmarking tools for these qudit systems in an algorithm-agnostic manner. We gauge the performance of these qudit platforms using sampling tests such as the heavy output generation test as well as the linear cross-entropy benchmark, by way of simulations of such a system subject to realistic dominant noise channels. We use selective number-dependent arbitrary phase and unconditional displacement gates as our universal gateset. Our results show that contemporary transmons comfortably enable controlling a few tens of Fock levels of a cavity mode. This framework allows benchmarking even higher dimensional qudits as those become accessible with improved transmons.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Heat exposure and maternal stress: evidence from the GRAPHS pregnancy cohort in Ghana

Heat exposure has been linked to psychosocial stress, an established antecedent of perinatal depression; however, evidence on heat-related stress during pregnancy in sub-Saharan Africa remains limited. We analyzed psychosocial stress scores and covariate data from the Ghana Randomized Air Pollution and Health Study, linking daily maximum and minimum shaded wet bulb globe temperature (WBGT) metrics to participants’ stress scores derived from the Crisis in Family Systems-Revised Life Events Questionnaire. We evaluated associations using ordinal logistic regression of pregnancy-average and trimester-average exposures and distributed lag non-linear models (DLNMs) to assess time-varying associations across gestation. Higher average maximum WBGT exposure across pregnancy was associated with increased odds of higher psychosocial stress; each 1 °C increase in maximum WBGT was associated with 64% higher odds of belonging to a higher stress category (OR = 1.64; 95% CI = 1.17–2.31; p = 0.0040). In trimester-average models, higher first-trimester maximum WBGT was also associated with higher stress (OR = 1.44; 95% CI = 1.15–1.81; p = 0.0014). DLNMs suggested that relatively cooler daily maximum WBGT values (25th percentile) were associated with decreased odds of stress in early pregnancy, whereas extreme daily maximum WBGT values (99th percentile) showed a pattern consistent with increased odds of stress in mid-to-late gestation. These findings highlight gestational windows in which heat exposure may influence stress, emphasizing the need for further research into underlying mechanisms and effective interventions to protect maternal mental health in heat-vulnerable settings.

White, Lewis [Columbia University] (ORCID:00090005↗

miss-SNF: a multimodal patient similarity network integration approach to handle completely missing data sources

Abstract Motivation Precision medicine leverages patient-specific multimodal data to improve prevention, diagnosis, prognosis, and treatment of diseases. Advancing precision medicine requires the non-trivial integration of complex, heterogeneous, and potentially high-dimensional data sources, such as multi-omics and clinical data. In the literature, several approaches have been proposed to manage missing data, but are usually limited to the recovery of subsets of features for a subset of patients. A largely overlooked problem is the integration of multiple sources of data when one or more of them are completely missing for a subset of patients, a relatively common condition in clinical practice. Results We propose miss-Similarity Network Fusion (miss-SNF), a novel general-purpose data integration approach designed to manage completely missing data in the context of patient similarity networks. miss-SNF integrates incomplete unimodal patient similarity networks by leveraging a non-linear message-passing strategy borrowed from the SNF algorithm. miss-SNF is able to recover missing patient similarities and is “task agnostic”, in the sense that can integrate partial data for both unsupervised and supervised prediction tasks. Experimental analyses on nine cancer datasets from The Cancer Genome Atlas (TCGA) demonstrate that miss-SNF achieves state-of-the-art results in recovering similarities and in identifying patients subgroups enriched in clinically relevant variables and having differential survival. Moreover, amputation experiments show that miss-SNF supervised prediction of cancer clinical outcomes and Alzheimer’s disease diagnosis with completely missing data achieves results comparable to those obtained when all the data are available. Availability and implementation miss-SNF code, implemented in R, is available at https://github.com/AnacletoLAB/missSNF.

Biochemistry & Molecular Biology↗

Emission line predictions for mock galaxy catalogues: a new differentiable and empirical mapping from DESI

ABSTRACT We present a simple, differentiable method for predicting emission line strengths from rest-frame optical continua using an empirically determined mapping. Extensive work has been done to develop mock galaxy catalogues that include robust predictions for galaxy photometry, but reliably predicting the strengths of emission lines has remained challenging. Our new mapping is a simple neural network implemented using the JAX Python automatic differentiation library. It is trained on Dark Energy Spectroscopic Instrument Early Release data to predict the equivalent widths (EWs) of the eight brightest optical emission lines (including H α, H β, [O ii], and [O iii]) from a galaxy’s rest-frame optical continuum. The predicted EW distributions are consistent with the observed ones when noise is accounted for, and we find Spearman’s rank correlation coefficient ρs > 0.87 between predictions and observations for most lines. Using a non-linear dimensionality reduction technique, we show that this is true for galaxies across the full range of observed spectral energy distributions. In addition, we find that adding measurement uncertainties to the predicted line strengths is essential for reproducing the distribution of observed line-ratios in the BPT diagram. Our trained network can easily be incorporated into a differentiable stellar population synthesis pipeline without hindering differentiability or scalability with GPUs. A synthetic catalogue generated with such a pipeline can be used to characterize and account for biases in the spectroscopic training sets used for training and calibration of photo-z’s, improving the modelling of systematic incompleteness for the Rubin Observatory LSST and other surveys.

79 ASTRONOMY AND ASTROPHYSICS↗

SUNBIRD : a simulation-based model for full-shape density-split clustering

Combining galaxy clustering information from regions of different environmental densities can help break cosmological parameter degeneracies and access non-Gaussian information from the density field that is not readily captured by the standard two-point correlation function (2PCF) analyses. However, modelling these density-dependent statistics down to the non-linear regime has so far remained challenging. We present a simulation-based model that is able to capture the cosmological dependence of the full shape of the density-split clustering (DSC) statistics down to intra-halo scales. Our models are based on neural-network emulators that are trained on high-fidelity mock galaxy catalogues within an extended-ΛCDM framework, incorporating the effects of redshift-space, Alcock–Paczynski distortions, and models of the halo–galaxy connection. Our models reach sub-percent level accuracy down to $1 \, h^{-1}\text{Mpc}$ and are robust against different choices of galaxy–halo connection modelling. When combined with the galaxy 2PCF, DSC can tighten the constraints on ω cdm , σ 8 , and n s by factors of 2.9, 1.9, and 2.1, respectively, compared to a 2PCF-only analysis. DSC additionally puts strong constraints on environment-based assembly bias parameters.

79 ASTRONOMY AND ASTROPHYSICS↗

The 3D Lyman- α forest power spectrum from eBOSS DR16

We measure the three-dimensional power spectrum (P3D) of the transmitted flux in the Lyman-α (Ly α) forest using the complete extended Baryon Oscillation Spectroscopic Survey data release 16 (eBOSS DR16). This sample consists of ~205 000 quasar spectra in the redshift range 2 ≤ z ≤ 4 at an effective redshift z = 2.334. We propose a pair-count spectral estimator in configuration space, weighting each pair by exp( i k ∙ r), for wave vector k and pixel pair separation r, effectively measuring the anisotropic power spectrum without the need for fast Fourier transforms. This accounts for the window matrix in a tractable way, avoiding artefacts found in Fourier-transform based power spectrum estimators due to the sparse sampling transverse to the line of sight of Ly α skewers. We extensively test our pipeline on two sets of mocks: (i) idealized Gaussian random fields with a sparse sampling of Ly α skewers, and (ii) log-normal LyaCoLoRe mocks including realistic noise levels, the eBOSS survey geometry and contaminants. On eBOSS DR16 data, the Kaiser formula with a non-linear correction term obtained from hydrodynamic simulations yields a good fit to the power spectrum data in the range $(0.02 ≤ k ≤ 0.35)$ h Mpc -1 at the 1–2σ level with a covariance matrix derived from LyaCoLoRe mocks. We demonstrate a promising new approach for full-shape cosmological analyses of Ly α forest data from cosmological surveys such as eBOSS, the currently observing Dark Energy Spectroscopic Instrument and future surveys such as the Prime Focus Spectrograph, WEAVE-QSO, and 4MOST.

79 ASTRONOMY AND ASTROPHYSICS↗

Baryon acoustic oscillation theory and modelling systematics for the DESI 2024 results

This paper provides a comprehensive overview of how fitting of baryon acoustic oscillations (BAO) is carried out within the upcoming Dark Energy Spectroscopic Instrument’s (DESI) 2024 results using its DR1 data set, and the associated systematic error budget from theory and modelling of the BAO. We derive new results showing how non-linearities in the clustering of galaxies can cause potential biases in measurements of the isotropic (⁠α iso ⁠) and anisotropic (⁠α ap ) BAO distance scales, and how these can be effectively removed with an appropriate choice of reconstruction algorithm. We then demonstrate how theory leads to a clear choice for how to model the BAO and develop, implement, and validate a new model for the remaining smooth-broad-band (i.e. without BAO) component of the galaxy clustering. Finally, we explore the impact of all remaining modelling choices on the BAO constraints from DESI using a suite of high-precision simulations, arriving at a set of best practices for DESI BAO fits, and an associated theory and modelling systematic error. Overall, our results demonstrate the remarkable robustness of the BAO to all our modelling choices and motivate a combined theory and modelling systematic error contribution to the post-reconstruction DESI BAO measurements of no more than 0.1 per cent (0.2 per cent) for its isotropic (anisotropic) distance measurements. We expect the theory and best practices laid out to here to be applicable to other BAO experiments in the era of DESI and beyond.

79 ASTRONOMY AND ASTROPHYSICS↗

Dark energy survey year 3 results: likelihood-free, simulation-based w CDM inference with neural compression of weak-lensing map statistics

We present simulation-based cosmological wcold dark matter (wCDM) inference using dark energy survey year 3 weak-lensing maps, via neural data compression of weak-lensing map summary statistics: power spectra, peak counts, and direct map-level compression/inference with convolutional neural networks (CNN). Using simulation-based inference, also known as likelihood-free or implicit inference, we use forward-modelled mock data to estimate posterior probability distributions of unknown parameters. This approach allows all statistical assumptions and uncertainties to be propagated through the forward-modelled mock data; these include sky masks, non-Gaussian shape noise, shape measurement bias, source galaxy clustering, photometric redshift uncertainty, intrinsic galaxy alignments, non-Gaussian density fields, neutrinos, and non-linear summary statistics. We include a series of tests to validate our inference results. This paper also describes the Gower Street simulation suite: 791 full-sky pkdgrav3 dark matter simulations, with cosmological model parameters sampled with a mixed active-learning strategy, from which we construct over 3000 mock dark energy survey lensing data sets. For wCDM inference, for which we allow –1 < w < –$\frac{1}{3}$⁠, our most constraining result uses power spectra combined with map-level (CNN) inference. Using gravitational lensing data only, this map-level combination gives Ω m = 0.283$^{+0.020}_{–0.027}$⁠, S 8 = 0.804$^{+0.025}_{–0.017⁠}$, and w < –0.80 (with a 68 per cent credible interval); compared to the power spectrum inference, this is more than a factor of two improvement in dark energy parameter (Ω⁠ DE , w⁠) precision.

79 ASTRONOMY AND ASTROPHYSICS↗

The influence of the cloud virial parameter on the initial mass function

ABSTRACT Crucial for star formation is the interplay between gravity and turbulence. The observed cloud virial parameter, $\alpha _{\mathrm{vir}}$, which is the ratio of twice the turbulent kinetic energy to the gravitational energy, is found to vary significantly in different environments, where the scatter among individual star-forming clouds can exceed an order of magnitude. Therefore, a strong dependence of the initial mass function (IMF) on $\alpha _{\mathrm{vir}}$ may challenge the notion of a universal IMF. To determine the role of $\alpha _{\mathrm{vir}}$ on the IMF, we compare the star-particle mass functions obtained in high-resolution magnetohydrodynamical simulations including jet and heating feedback, with $\alpha _{\mathrm{vir}}=0.0625$, 0.125, and 0.5. We find that varying $\alpha _{\mathrm{vir}}$ from $\alpha _{\mathrm{vir}}\sim 0.5$ to $\alpha _{\mathrm{vir}}< 0.1$ shifts the peak of the IMF to lower masses by a factor of $\sim 2$ and increases the star formation rate by a similar factor. The dependence of the IMF and star formation rate on $\alpha _{\mathrm{vir}}$ is non-linear, with the dependence subsiding at $\alpha _{\mathrm{vir}}< 0.1$. Our study shows a systematic dependence of the IMF on $\alpha _{\mathrm{vir}}$. Yet, it may not be measurable easily in observations, considering the uncertainties, and the relatively weak dependence found in this study.

Mathew, Sajay Sunny (ORCID:0000000283818195)↗

Galactic echoes

Gaia has revealed a variety of substructures in the phase space of stars in the Solar neighbourhood, including the vertical ‘Snail’ $(z, v_z)$ in space. Such substructures are often interpreted as the incompletely phase-mixed response of the disc stars to a single perturbation, such as an impulsive encounter with a satellite galaxy. In this paper, we consider the possibility that such structures contain manifestations of phase-space echoes. First established in plasma physics in the 1960s, echoes arise when a collisionless system is perturbed twice: the macroscopic responses to both perturbations mix to small scales in phase space, whereupon they couple non-linearly, producing a third macroscopic ‘echo’ response without the need for a third perturbation. We derive the galactic analogue of the plasma echo theory using angle-action variables and apply it to a one-dimensional model of vertical motion in the Milky Way. We verify the predicted echo behaviour using idealized test particle simulations, both with and without the inclusion of diffusion through orbital scattering off molecular clouds. While we conclude that the Gaia Snail itself is unlikely a (pure) echo effect, the basic physics we uncover is sufficiently generic that we expect phase-space echoes to be common in disc galaxies.

Galaxy: evolution↗

Neural network-based model of galaxy power spectrum: fast full-shape galaxy power spectrum analysis

ABSTRACT We present a neural network-based emulator for the galaxy redshift-space power spectrum that enables several orders of magnitude acceleration in the galaxy clustering parameter inference, while preserving 3$\sigma$ accuracy better than 0.5 per cent up to $k_{\mathrm{max}}$ = 0.25 $\, h\text{Mpc}^{-1}$ within Lambda-cold dark matter ($\Lambda$CDM) and around 0.5 per cent $w_0$–$w_a$CDM. Our surrogate model only emulates the galaxy bias-invariant terms of one-loop perturbation theory predictions, these terms are then combined analytically with galaxy bias terms, counter-terms, and stochastic terms in order to obtain the non-linear redshift-space galaxy power spectrum. This allows us to avoid any galaxy bias prescription in the training of the emulator, which makes it more flexible. Moreover, we include the redshift $z \in [0,1.4]$ in the training which further avoids the need for re-training the emulator. We showcase the performance of the emulator in recovering the cosmological parameters of $\Lambda$CDM by analysing the suite of 25 AbacusSummit simulations that mimic the Dark Energy Spectroscopic Instrument luminous red galaxies at $z=0.5$ and 0.8, together as the emission line galaxies at $z=0.8$. We obtain similar performance in all cases, demonstrating the reliability of the emulator for any galaxy sample at any redshift in $0 \lt z \lt 1.4$. We will make our emulator public at github repository.

Trusov, Svyatoslav (ORCID:0000000224146720)↗

Constraining the phase shift of relativistic species in DESI BAOs

In the early Universe, neutrinos decouple quickly from the primordial plasma and propagate without further interactions. The impact of free-streaming neutrinos is to create a temporal shift in the gravitational potential that impacts the acoustic waves known as baryon acoustic oscillations (BAOs), resulting in a non-linear spatial shift in the Fourier-space BAO signal. In this work, we make use of and extend upon an existing methodology to measure the phase shift amplitude $\beta _{\phi }$ and apply it to the Dark Energy Spectroscopic Instrument (DESI) Data Release 1 (DR1) BAOs with an anisotropic BAO fitting pipeline. We validate the fitting methodology by testing the pipeline with two publicly available fitting codes applied to highly precise cubic box simulations and realistic simulations representative of the DESI DR1 data. We find further study towards the methods used in fitting the BAO signal will be necessary to ensure accurate constraints on $\beta _{\phi }$ in future DESI data releases. Using DESI DR1, we present individual measurements of the anisotropic BAO distortion parameters and the $\beta _{\phi }$ for the different tracers, and additionally a combined fit to $\beta _{\phi }$ resulting in $\beta _{\phi } = 2.7 \pm 1.7$. After including a prior on the distortion parameters from constraints using Planck we find $\beta _{\phi } = 2.7^{+0.60}_{-0.67}$ suggesting $\beta _{\phi } > 0$ at 4.3$\sigma$ significance. This result may hint at a phase shift that is not purely sourced from the standard model expectation for $N_{\rm {eff}}$ or could be a upwards statistical fluctuation in the measured $\beta _{\phi }$; this result relaxes in models with additional freedom beyond Lambda-cold dark matter.

79 ASTRONOMY AND ASTROPHYSICS↗

Measuring and unbiasing the BAO shift in the Ly α forest with AbacusSummit

ABSTRACT The Dark Energy Spectroscopic Instrument (DESI) places sub- per cent constraints on measurements of the Baryon Acoustic Oscillation (BAO) scaling parameters from the Ly $\alpha$ forest. However, no systematic error budget stemming from non-linearities in the three-dimensional clustering of the Ly $\alpha$ forest is included in the DESI-Ly $\alpha$ analysis. In this work, we measure the size of the shift of the BAO peak using large Ly $\alpha$ forest mocks produced on the N-body simulation suite AbacusSummit, which adopt the Fluctuating–Gunn–Peterson Approximation (FGPA). Specifically, we measure the Ly $\alpha$ autocorrelation and the Ly $\alpha$-quasar cross-correlation functions. To mitigate the noise, we adopt a linear control variates technique, reducing the error bars by a factor of up to $\sim \sqrt{50}$ on large scales. From the autocorrelation, we detect a small positive shift in radial direction of $\Delta \alpha _{\parallel }= 0.35~{{\ \rm per\ cent}}$ at the 3$\sigma$ level and virtually no shift in the transverse direction, $\alpha _\perp$. From the cross-correlation, we see a similar shift to $\Delta \alpha _\parallel$, albeit with larger error bars, and a small negative shift, $\Delta \alpha _{\perp }=\sim$0.25 per cent, at the 2$\sigma$ level. We also make a connection with the Ly $\alpha$ forest effective field theory (EFT) framework and find that the one-loop EFT power spectrum yields unbiased measurements of the BAO shift parameters in radial and transverse direction for Ly $\alpha$ auto- and the Ly $\alpha$-quasar cross-correlation measurements. When using the one-loop EFT framework, we find that we can recover the BAO parameters without a shift, which has important implications for future Ly $\alpha$ forest analyses based on EFT. This work paves the way for novel full-shape analyses of the currently observing DESI and future surveys such as the PFS, WEAVE-QSO, and 4MOST.

Hadzhiyska, Boryana↗

The effect of relative humidity and temperature on the response of stomatal conductance to vapor pressure deficit in tropical trees

Understanding how leaf gas exchange responds to changes in vapor pressure deficit (VPD) is key to predicting tropical forest resilience to climate change. Stomata regulate leaf water and CO2 diffusion, and respond to changes in temperature and relative humidity (RH), two drivers of VPD. At high temperatures, the cuticular pathway may also become significant and participate in the overall leaf conductance. Here, we measured gas exchange under light and dark conditions to investigate the stomatal and cuticular responses to temperature and RH on detached branches in five tropical tree species. Leaf conductance in the dark, when stomata are essentially closed, was not markedly impacted by temperature and RH, suggesting a minimal response of the cuticular pathway to these conditions. We compared six steady-state conductance models incorporating different effects of photosynthesis and evaporative demand on stomatal control. All models performed well (residual standard deviation, σ, < 0.025 mol m-2 s-1), but the best-fitting model (σ = 0.017 mol m-2 s-1) used a nonlinear relationship between photosynthesis and stomatal conductance and incorporated RH rather than vapor pressure difference. All models overestimated the steady-state conductance at high RH. Furthermore, leaf conductance immediately increased after a decrease in RH (wrong-way response), but not after an increase in leaf temperature. This suggests that the mechanisms underlying stomatal response to VPD need further investigation. The non-linear coupling between photosynthetic rate and stomatal conductance indicates a sharper physiological response than previously acknowledged.

Lamour, Julien↗

Acausality-driven instabilities in relativistic viscous hydrodynamics

We investigate non-linear instabilities stemming from superluminal propagation of information in Israel-Stewart-like models of relativistic viscous fluid dynamics. In relativity, the characteristic speed of propagation of information, $w$, and the speed of the fluid, $v$, allow us to differentiate between regimes of the hydrodynamic equations that are acausal but stable ($w>1$), unstable ($v^{2} w^{2} \geq 1$), and covariantly ill-posed ($w^{2} \leq 0$). As an analytical benchmark, we present a new solution that illustrates these distinct regimes. We compare this analytical solution to the result of a numerical relativistic viscous fluid dynamics solver, and confirm that the analytical result can be recovered numerically in the stable regime, whether causal or acausal. The onset of numerical instabilities is further found to occur in the regime predicted by the analytical solution.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Continuous-variable quantum computation of the O(3) model in 1+1 dimensions

We formulate the $O(3)$ non-linear sigma model in $1+1$ dimensions as a limit of a three-component scalar field theory restricted to the unit sphere in the large squeezing limit. This allows us to describe the model in terms of the continuous variable (CV) approach to quantum computing. Here we construct the ground state and excited states using the coupled cluster ansatz and find excellent agreement with the exact diagonalization results for a small number of lattice sites. We then present the simulation protocol for the time evolution of the model using CV gates, estimate the discretization error, and present numerical results obtained from a photonic quantum simulator. We expect that the methods developed in this work will be useful for exploring interesting dynamics for a wide class of sigma models and gauge theories, as well as for simulating scattering events on quantum hardware in the coming decade.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗