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DOE OSTI2025

Subharmonic Shapiro steps in depinning dynamics of a two-dimensional solid dusty plasma modulated by one-dimensional nonlinear deformed periodic substrates

Langevin dynamical simulations are performed to investigate the depinning dynamics of a two-dimensional (2D) solid dusty plasma, which is modulated by one-dimensional (1D) nonlinear deformed periodic substrates, and also driven by the combination of the DC and AC forces. As the DC driving force increases gradually, pronounced subharmonic and harmonic Shapiro steps are discovered under the combined modulation of the deformed substrate and the external AC drive. Here, these observed subharmonic and harmonic Shapiro steps are attributed to the dynamic mode locking. The data analysis results indicate that the nonlinear deformed substrate strongly influences these subharmonic Shapiro steps, which can be accurately diagnosed using the fraction of sixfold coordinated particles. Furthermore, the diagnostic of the kinetic temperature clearly indicates the difference between harmonic and subharmonic Shapiro steps, i.e., the particle motion is slightly less synchronized at subharmonic Shapiro steps, caused by the unstable locations of the deformed substrate.

36 MATERIALS SCIENCE↗

DOE OSTI2026

From 2D to 4D: a containerized workflow and browser to explore dynamic chromatin architecture

Background Characterizing the physical organization of the genome is essential for understanding long-range gene regulation, chromatin compartmentalization, and epigenetic accessibility. Hi-C experiments generate two-dimensional (2D) genome-wide contact maps of chromatin interactions by capturing the spatial proximity between genomic loci, which reveal interaction frequencies but lack the spatial resolution needed to interpret the three-dimensional (3D) genome structure(s). Emerging evidence suggests that epigenetic regulation is closely linked to 3D genome architecture, and that structural changes over time (4D) drive key biological processes in development, disease, and environmental response. Thus, integrating 3D structure with functional data is critical for a more complete understanding of genome regulation. Previous work, most notably the 4DHiC chromosome modeling framework, has shown that physical multi-dimensional modeling approaches rooted in polymer physics and molecular dynamics can resolve these structures at biologically meaningful resolutions by integrating temporal Hi-C data with physical constraints to uncover dynamic chromosome reorganization. Thus, molecular dynamics simulations, constrained by Hi-C contact matrices, can resolve fine-scale structural changes and reveal functionally significant transitions in chromatin conformation. Results Herein, we present the 4D Genome Browser Workflow (4DGBWorkflow) and the 4D Genome Browser (4DGB). The algorithm is based on the 4DHiC method, and the containerized tool is an end-to-end workflow that can transform, filter, and view 4D epigenomics and chromatin datasets, allowing non-specialists to apply three-dimensional modeling principles to diverse datasets and experimental conditions. The software executes on a laptop running macOS, Linux or Windows. From input Hi-C files (.hic), the 4DGBWorkflow produces 3D reconstructions of chromosomes, integrates the reconstruction with track data (e.g., epigenetic marks, transcriptome profiles), and provides comparative visualization of the results in a single workflow. Conclusions The 4DGBWorkflow and 4D Genome Browser are open-source tools for comparative analysis and visualization of 4D chromosome datasets, including chromatin architecture and epigenomic signals. Automatic integration of Hi-C data with molecular dynamics democratizes the construction of time resolved 3D genome structures, simplifying complex simulations and data integration schemes.

3D Genome Browser↗

DOE OSTI2025

Model Development and Analysis of a High-Fidelity Neutron Transport Sensor: The Quadrupole Detector Concept for Measurement of the Neutron Flux Gradient

Accurate reconstruction of the neutron flux distribution within a reactor core is essential for safe and efficient reactor operation. Traditional power shape synthesis in Light Water Reactors relies on hundreds of in-core detectors. However, this approach becomes impractical for Advanced Reactors and Microreactors due to limited space and harsh environments. To address this challenge, we propose a data-driven methodology that combines high-fidelity modeling with real-time ex-core sensor measurements, enabling the reconstruction of core power distribution while minimizing the reliance on intrusive in-core instrumentation. This project began in FY24 and achieved two initial milestones: (1) the definition of a three-year development plan for a Digital Twin framework and (2) the development of high-fidelity neutronics models of the Purdue University Reactor One (PUR-1) using both MCNP6 and OpenMC. The PUR-1 reactor, a zero-power facility, was selected due to its suitability for neutronics-focused modeling and the availability of experimental data for validation. Both models were benchmarked using neutron flux measurements obtained from irradiated gold foils, which were strategically placed within the core during a dedicated campaign in July 2024. This report marks the continuation and completion of those foundational tasks. The OpenMC model has been refined (improved geometric accuracy, expanded cross-section libraries, and refined sampling) and validated using additional experimental data. An updated sensor design—based on quadrupole configuration—was designed to measure both ex-core flux and its spatial gradient. These measurements will serve as inputs to a neural network-based reconstruction algorithm. Finally, the methodology was demonstrated on a two-dimensional test case representative of the heterogeneous material composition of the PUR-1 reactor core. A neural network implementation of the Kirchhoff-Helmholtz integral equation was employed to solve the boundary value problem using peripheral sensor measurements. The preliminary results confirm the strong potential of the proposed approach for accurate and minimally invasive neutron flux reconstruction.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

DOE OSTI2025

Implementation of Perturbation Theory and Sensitivity Capabilities in Griffin

Griffin is a Multiphysics Object-Oriented Simulation Environment (MOOSE) based reactor Multiphysics analysis application, jointly developed by Argonne and Idaho National Laboratories under the DOE-NE NEAMS program. This fiscal year, capabilities for reactivity and sensitivity evaluation using perturbation methods were implemented and verified. The First Order Perturbation Method (FOPT) was employed to compute reactivity worth resulting from small perturbations in input parameters, while the Generalized Perturbation Theory (GPT) was used to evaluate sensitivities of a range of response types, including reaction rate ratio, k-eigenvalue, neutron generation time, and effective delayed neutron fraction. These perturbation methods enable users to quantify how response quantities change due to a perturbation in a input parameter without explicitly performing an additional transport simulation for each perturbed state. In particular, the GPT formulation accounts for indirect effects arising from flux changes by solving generalized inhomogeneous equations, for which a Neumann series-based iterative solution method was developed and implemented in Griffin. The implemented reactivity and sensitivity evaluation capabilities were verified using two test problems: an infinite homogeneous system and a two-dimensional hexagonal core. The results showed excellent agreement with reference solutions obtained by a direct method based on finite difference approximation as well as GPT-based results from the PERSENT code, confirming the accuracy of both reactivity and sensitivity evaluations. Additionally, preliminary uncertainty quantification (UQ) results were obtained by combining the sensitivity values computed using GPT and external covariance data, demonstrating that the implemented sensitivity results can be reliably used for uncertainty calculations. To further demonstrate the generality and practical strength of the implementation, the sensitivity evaluation capability was successfully applied to the Empire microreactor with a geometrically complex design that poses significant modeling challenges. The results confirm that Griffin enables sensitivity evaluations even for irregular and highly heterogeneous reactor configurations, thereby establishing a foundation for UQ applications in advanced reactor designs and analyses.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

DOE OSTI2025

Living on the edge: a non-perturbative resolution to the negativity of bulk entropies

Lin, Maldacena, Rozenberg, and Shan (LMRS) presented a new information paradox in black hole physics by noticing that the entanglement and Rényi entropies in a two-sided black hole can become negative when the geometry contains a very large number of matter excitations behind the black hole horizon. While originally this puzzle was presented in the context of BPS two-sided black holes in two-dimensional supergravity, the negativity in fact persists for more general two-sided black holes in the presence of a large number of matter excitations. Since the entanglement and Rényi entropies in ordinary quantum systems cannot be negative, resolving this puzzle is a necessary step towards understanding the quantum mechanical description of black holes. In this paper, we explain how to address the entanglement negativity puzzle, both in the original setting discussed by LMRS and in more general non-supersymmetric settings, by summing over all non-perturbative contributions to the gravitational path integral. We then interpret this result from the point of view of a dual matrix integral, which we use to extend our analysis beyond the regime of validity of the genus re-summation performed in the gravitational path integral. In this regime, positivity is rescued by new saddles of the matrix integral, a one-eigenvalue instanton and a two-eigenvalue instanton. Finally, we formulate a similar puzzle and its resolution using random tensor network techniques.

FOS: Physical sciences↗

NASA NTRS1966

On the two-dimensional atmospheric turbulence response of an airplane

Two dimensional gust response analysis of aircraft to atmospheric turbulence

Sawdy, D. T.↗

NASA NTRS1970

Analysis of heat transfer in a bounded two- dimensional porous region and application to a porous square duct

Two-dimensional transpiration heat conduction in porous region bounded by four surfaces

Goldstein, M. E.↗

NASA NTRS1972

Noise from two-dimensional vortices

The fluctuating flow in an idealized model of a turbulent shear layer composed of many discrete vortices is analyzed. Computer solutions reveal irregular motions which are similar in many respects to observed flows in turbulent three-dimensional layers. The model is further simplified to a pair of equal co-rotating vortices and the noise generation is analyzed in terms of equivalent quadrupole oscillations. Results of the analysis in a uniform medium are consistent with Lighthill's results. New results are obtained for the effects of mean velocity gradients, compressibility, temperature inhomogenities, and gradients of the mean Mach number.

Sanders, N. D.↗

NASA NTRS1972

Study of effects of design details on structural response to acoustic excitation

The normal mode vibration characteristics of one-dimensional and two-dimensional panel arrays were investigated analytically and experimentally. The finite element displacement method was used to formulate the structural models. The structural models include a stiffness and consistent mass matrix for thin-walled open-section beams not previously reported, and a modification of a rectangular plate bending element to include a fundamental interior mode for the element as a generalized coordinate. Provision for adding lumped masses to represent accelerometers is also included. For the one-dimensional panel, the normal mode stress resultants are obtained by integrating the equilibrium equations directly. For the two-dimensional panel arrays, the solution for the stress resultants in the cover sheet was attempted by introducing stress functions dependent upon the displacement field of the plate element. This approach, although incomplete, is a natural extension of the one-dimensional analysis for plate elements. The exerimental program which was used to verify the analysis is described and experimental results are compared with the analysis.

Rudder, F. F., Jr.↗

NASA NTRS1972

Inviscid analysis of jet injection between two moving streams

An analytical method is developed for determining the flow interaction when a two-dimensional jet is injected between two moving streams. The jet is flowing out of channel and is turned as it enters between the external streams. The local velocity variation resulting from the flow interaction provides a static pressure variation along the jet bounding streamlines that is a priori unknown. Hense, the flow must be obtained by coupling the three flow regions (the jet and the free stream on either side) along the jet boundaries. Both external streams have the same total pressure, which is different from that in the jet. The solution is for the condition that the total pressure in the jet does not differ from the free-stream value by a large amount compared with the free-stream dynamic head. Results are given for the shape of the jet boundaries for various injection configurations.

Goldstein, M. E.↗

NASA NTRS1972

Assessment of advances in structural analysis for space shuttle

The latest technology for structural analysis in relation to the design tasks that lie ahead for the space shuttle is reviewed. For shell-of-revolution structures, the analysis can be formulated as a one-dimensional problem which is readily solved by using finite-difference or numerical-integration techniques. For more general asymmetric shells, a two-dimensional formulation is required. However, the governing equations are readily formulated and are amenable to solution by finite-difference techniques. For a completely general structural arrangement, such as structural frameworks, recourse is usually made to discretized formulations using finite elements. Of course, the finite-element programs could be used for shell structures, but at a loss in accuracy and increase in computer time compared with the special purpose programs.

Dixon, S. C.↗

NASA NTRS1972

Noise from two-dimensional vortices.

Sanders, N. D.↗

NASA NTRS1972

A prediction model for lift-fan simulator performance

The performance characteristics of a model VTOL lift-fan simulator installed in a two-dimensional wing are presented. The lift-fan simulator consisted of a 15-inch diameter fan driven by a turbine contained in the fan hub. The performance of the lift-fan simulator was measured in two ways: (1) the calculated momentum thrust of the fan and turbine (total thrust loading), and (2) the axial-force measured on a load cell force balance (axial-force loading). Tests were conducted over a wide range of crossflow velocities, corrected tip speeds, and wing angle of attack. A prediction modeling technique was developed to help in analyzing the performance characteristics of lift-fan simulators. A multiple linear regression analysis technique is presented which calculates prediction model equations for the dependent variables.

Yuska, J. A.↗

NASA NTRS1972

Optimization of thermal protection systems for the space shuttle vehicle. Volume 1: Final report

A study performed to continue development of computational techniques for the Space Shuttle Thermal Protection System is reported. The resulting computer code was used to perform some additional optimization studies on several TPS configurations. The program was developed in Fortran 4 for the CDC 6400, and it was converted to Fortran 5 to be used for the Univac 1108. The computational methodology is developed in modular fashion to facilitate changes and updating of the techniques and to allow overlaying the computer code to fit into approximately 131,000 octal words of core storage. The program logic involves subroutines which handle input and output of information between computer and user, thermodynamic stress, dynamic, and weight/estimate analyses of a variety of panel configurations. These include metallic, ablative, RSI (with and without an underlying phase change material), and a thermodynamic analysis only of carbon-carbon systems applied to the leading edge and flat cover panels. Two different thermodynamic analyses are used. The first is a two-dimensional, explicit precedure with variable time steps which is used to describe the behavior of metallic and carbon-carbon leading edges. The second is a one-dimensional implicity technique used to predict temperature in the charring ablator and the noncharring RSI. The latter analysis is performed simply by suppressing the chemical reactions and pyrolysis of the TPS material.

Source record↗

NASA NTRS1973

Computer based analyses of the response of box type structures to random pressures.

Analysis of the vibration of the internal structure of a relatively simple flight vehicle structural model consisting of a multicellular box in which two parallel outer face plates (skins) are connected together by several internal plates (ribs) which are parallel to each other and normal to the face plates. Such a box is representative of a wing or stabilizer structure. Three representations of the structure were considered in the computation. The simplest model which can account for the coupling between the face plates and the ribs is a two-dimensional assembly of beams. A more realistic, yet still simple, three-dimensional model has been developed using the Rayleigh-Ritz method. The third computational method employed was the NASTRAN finite-element displacement method. The computational results are compared with experimental data.

Clarkson, B. L.↗

NASA NTRS1973

The use of statistical characteristics of reducer vibrations as diagnostic symptoms

The results of a statistical analysis of the vibrations of the experimental RS-1 reducer stand, with a spiral-gear transmission, operating on a closed circuit, are presented. The analysis was carried out on the Minsk-2 and Minsk-32 digital computers, with two-channel analog-digital converter, built in the Institute of the Science of Mechanics. Two-dimensional distribution patterns, conditional dispersions and dispersion ratios were calculated. The octave-band-filtered first harmonics of the tooth frequency f sub z of the vibrations at two different measurement points were considered as the components of the vibration process to be analyzed. The regression lines, corresponding to different values of the loading torque, are presented. Since it was not the gear drive parameters which were determined by diagnostic methods, but the characteristics most sensitive to change in state of the object of the investigation, the loading torque, which is the simplest and most accessible for measurement, was chosen as the condition parameter.

Balitskiy, F. Y.↗

NASA NTRS1951

Flow through cascades in tandem

An exact treatment of the problem of finding the incompressible, inviscid two-dimensional flow around two cascades in tandem is presented. The analysis includes solutions of both the direct and the inverse problems. These problems are solved by conformally mapping the tandem cascade onto the region between two concentric circles in which region there are suitably placed flow singularities. Formulas for the velocity and the potential in the annular region are presented in a closed form by means of elliptic functions. The equations are presented in a form suitable for computation.

Spraglin, William E↗

NASA NTRS1948

Theoretical Analysis of Stationary Potential Flows and Boundary Layers at High Speed

The present report consists of two parts. The first part deals with the two-dimensional stationary flow in the presence of local supersonic zones. A numerical method of integration of the equation of gas dynamics is developed. Proceeding from solutions at great distance from the body the flow pattern is calculated step by step. Accordingly the related body form is obtained at the end of the calculation. The second part treats the relationship between the displacement thickness of laminar and turbulent boundary layers and the pressure distribution at high speeds. The stability of the boundary layer is investigated, resulting in basic differences in the behavior of subsonic and supersonic flows. Lastly, the decisive importance of the boundary layer for the pressure distribution, particularly for thin profiles, is demonstrated.

Oswaititsch, K.↗