Search NASA⌕ Search

SEARCH · Search NASA

Results for “digital Image correlation”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 289 records · Page 16
All sourcesNASA NTRSDOE OSTI
DOE OSTI2021

Coupling dynamic in situ X-ray micro-imaging and indentation: A novel approach to evaluate micromechanics applied to oil shale

Oil and gas shales are a system where understanding the mechanical properties at the microscale is of paramount importance, e.g. to better understand the behavior of proppant-shale contacts and their role in the evolution of propped fractures in unconventional reservoirs. Here we show for the first time an experiment coupling indentation testing with in situ X-ray imaging in a Green River shale sample. A full compliance curve has been measured with the sample in water, allowing to visualize the indentation of the sample in function of axial load, in a purpose-built system for combined in situ indentation and X-ray imaging. A series of 3D datasets were used for a digital volume correlation study to obtain local strain fields. This analysis has been complemented with the analysis of cracks. Finally, geomechanical modeling has been carried out to replicate and generalize the observed behavior in the shale. This study validated this experimental approach, providing a breakthrough in understanding micro-mechanics in shales, and demonstrates how this class of experiments can be important for studies involving the prediction of the evolution of propped fractures in shale reservoirs, with possible applications in a much larger number of application fields (geothermal, materials science, etc.)

04 OIL SHALES AND TAR SANDS↗
DOE OSTI2019

Cosmology with galaxy–galaxy lensing on non-perturbative scales: emulation method and application to BOSS LOWZ

ABSTRACT We describe our non-linear emulation (i.e. interpolation) framework that combines the halo occupation distribution (HOD) galaxy bias model with N-body simulations of non-linear structure formation, designed to accurately predict the projected clustering and galaxy–galaxy lensing signals from luminous red galaxies in the redshift range 0.16 < z < 0.36 on comoving scales 0.6 < rp < 30 $h^{-1} \, \text{Mpc}$. The interpolation accuracy is ≲ 1–2 per cent across the entire physically plausible range of parameters for all scales considered. We correctly recover the true value of the cosmological parameter S8 = (σ8/0.8228)(Ωm/0.3107)0.6 from mock measurements produced via subhalo abundance matching (SHAM)-based light-cones designed to approximately match the properties of the SDSS LOWZ galaxy sample. Applying our model to Baryon Oscillation Spectroscopic Survey (BOSS) Data Release 14 (DR14) LOWZ galaxy clustering and galaxy-shear cross-correlation measurements made with Sloan Digital Sky Survey (SDSS) Data Release 8 (DR8) imaging, we perform a prototype cosmological analysis marginalizing over wCDM cosmological parameters and galaxy HOD parameters. We obtain a 4.4 per cent measurement of S8 = 0.847 ± 0.037, in 3.5σ tension with the Planck cosmological results of 1.00 ± 0.02. We discuss the possibility of underestimated systematic uncertainties or astrophysical effects that could explain this discrepancy.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

Combining In-situ Diagnostics and Data Analytics for Discovery of Process-Structure-Property Relationships in AM parts – A Step Toward Digital Twins

In-situ additive manufacturing (AM) diagnostic tools (e.g., optical/infrared imaging, acoustic, etc.) already exist to correlate process anomalies to printed part defects. This current work aimed to augment existing capabilities by: 1) Incorporating in-situ imaging w/ machine learning (ML) image processing software (ORNL- developed "Peregrine") for AM process anomaly detection 2) Synchronizing multiple in-situ sensors for simultaneous analysis of AM build events 3) Correlating in-situ AM process data, generated part defects and part mechanical properties The key R&D question investigated was to determine if these new combined hardware/software tools could be used to successfully quantify defect distributions for parts build via SNL laser powder bed fusion (LPBF) machines, aiming to better understand data-driven process-structure-property- performance relationships. High resolution optical cameras and acoustic microphones were successfully integrated in two LPBF machines and linked to the Peregrine ML software. The software was successfully calibrated on both machines and used to image hundreds of layers of multiple builds to train the ML software in identifying printed part vs powder. The software's validation accuracy to identify this aspect increased from 56% to 98.8% over three builds. Lighting conditions inside the chamber were found to significantly impact ML algorithm predictions from in-situ sensors, so these were tailored to each machine's internal framework. Finally, 3D part reconstructions were successfully generated for a build from the compressed stack of layer-wise images. Resolution differences nearest and furthest from the optical camera were discussed. Future work aims to improve optical resolution, increase process anomalies identified, and integrate more sensor modalities.

36 MATERIALS SCIENCE↗
DOE OSTI2023

In situ high-temperature 3D imaging of the damage evolution in a SiC nuclear fuel cladding material

Silicon carbide (SiC)-based nuclear fission fuel rod cladding has been considered as one of the possible designs for accident tolerant fuels. It is in the form of a SiC fibre reinforced SiC matrix composite tube (SiC f -SiC m ) with monolithic SiC outer and/or inner coating layers. This study focuses on the deformation and fracture processes in this material using in situ X-ray micro-computed tomography (XCT) at room temperature (RT) and 1200 °C in an inert gas environment in a C-ring compression loading configuration. Prior to testing, local properties and residual stresses were characterised using nanoindentation and Raman spectroscopy since they can impact the mechanical behaviour of the material. The 3D strain distribution, crack formation and propagation processes including the toughening mechanisms (e.g., crack deflection, micro-cracking, crack bridging and bifurcation) are investigated in the coating and underlying composites at RT and 1200 °C. There is no particular sequence which toughening mechanism occurs first – this is very different from the conventional toughening theory in ceramic-matrix composites under uniaxial tension loading. Indeed, no evidence of fibre pull-out or fibre fracture was observed in this SiC f -SiC m nuclear cladding material in the current C-ring compression configuration. The correlation between local measurements and bulk mechanical behaviour are discussed.

3D imaging↗
DOE OSTI2021

Volumetric and shear strain localization throughout triaxial compression experiments on rocks

Deformation localization is a widely observed, but rarely quantified process in the crust. Recent observations suggest that the localization of seismicity and fracture networks can help identify the approach to catastrophic failure. Here, we quantify the localization processes of the volumetric and deviatoric strain components in twelve triaxial compression experiments imaged with X-ray tomography. We capture three-dimensional images of the rock cores during triaxial compressing toward failure, and then calculate the local strain components using digital volume correlation. The divergence and curl of the incremental displacement vector field provide the volumetric and deviatoric components of the strain field. We quantify localization using the proportion of the rock occupied by high magnitudes of the volumetric and deviatoric strains, and the Gini coefficient of these high magnitude strains, which measures the deviation from a uniform process. We find that the vast majority, but not all, of the experiments experience strain localization toward failure. The rocks typically experience their maximum degree of strain localization not immediately preceding failure, but on average at 90% of the failure stress. The volumetric strain tends to localize more than the deviatoric strain. Finally, these observations support using the localization of the volumetric strain, along with the deviatoric strain, to identify the evolution of the precursory phase preceding earthquakes.

58 GEOSCIENCES↗
DOE OSTI2022

The Effect of Environment on Galaxy Spiral Arms, Bars, Concentration, and Quenching

For a sample of 4378 nearby spiral and S0 galaxies, Yu & Ho used Fourier analysis of Sloan Digital Sky Survey images to show that the strengths of the spiral arms and the pitch angles of the arms are inversely correlated with central concentration. In the current study, we search for trends in the Yu & Ho spiral arm parameters with environment and specific star formation rate (sSFR). When comparing galaxies with similar concentrations, we do not find a significant difference in the arm strengths or pitch angles of spiral galaxies in clusters compared to field galaxies. When differences in concentration are taken into account, we also find no significant difference in the parameter f3 for cluster spirals compared to field spirals, where f3 is the normalized m = 3 Fourier amplitude. When concentration is held fixed, both arm strength and pitch angle are correlated with sSFR, but f3 is not. These relations support the suggestion by Davis et al. of a "fundamental plane" of spiral structure involving pitch angle, bulge stellar mass, and gas surface density. We discuss these results in terms of theories of spiral arm production and quenching in galaxies. To aid comparison with earlier studies based on Galaxy Zoo, we explore how the Yu & Ho parameters relate to similar parameters measured by Galaxy Zoo (i.e., f3 versus the number of arms, pitch angle versus winding parameter, and concentration versus bulge class).

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2020

Mechanoadaptive strain and functional osseointegration of dental implants in rats

Spatiotemporal implant-bone biomechanics and mechanoadaptive strains in peri-implant tissue are poorly understood. Physical and chemical characteristics of an implant-bone complex (IBC) were correlated in three-dimensional space (along the length and around a dental implant) to gather insights into time related integration of the implant with the cortical portion of a jaw bone in a rat. Rats (N = 9) were divided into three experimental groups with three rats per time point; 3-, 11-, and 24-day. All rats were fed crumbled hard pellets mixed with water (soft-food diet) for the first 3 days followed by a hard-food diet with intact hard-food pellets (groups of 11- and 24-day only). Biomechanics of the IBCs harvested from rats at each time point was evaluated by performing mechanical testing in situ in tandem with X-ray imaging. The effect of physical association (contact area) of a loaded implant with adapting peri-implant tissue, and resulting strain within was mapped by using digital volume correlation (DVC) technique. The IBC stiffness at respective time points was correlated with mechanical strain in peri-implant tissue. Results illustrated that IBC stiffness at 11-day was lower than that observed at 3-day. However, at 24-day, IBC stiffness recovered to that which was observed at 3-day. Furthermore, correlative microscopy and spectroscopy illustrated that the lower IBC stiffness was constituted by softer and less mineralized peri-implant tissue that contained varying expressions of osteoconductive elements. Lower IBC stiffness observed at 11-day was constituted by less mineralized peri-implant tissue with osteoconductive elements that included phosphorus (P) which was co-localized with higher expression of zinc (Zn), and lower expression of calcium (Ca). Higher IBC stiffness at 24-day was constituted by mineralized peri-implant tissue with higher expressions of osteoconductive elements including Ca and P, and lower expressions of Zn. These spatiotemporal correlative maps of peri-implant tissue architecture, heterogeneous distribution of mineral density, and elemental colocalization underscore mechanoadaptive physicochemical properties of peri-implant tissue that facilitate functional osseointegration of an implant. These results provided insights into 1) plausible "prescription" of mechanical loads as an osteoinductive "therapeutic dose" to encourage osteoconductive elements in the peri-implant tissue that would facilitate functional osseointegration of the implant; 2) a "critical temporal window" between 3 and 11 days, and perhaps it is this acute phase during which key candidate regenerative molecules can be harnessed to accelerate osseointegration of an implant under load.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2020

Interlaboratory Study of Digital Volume Correlation Error Due to X-Ray Computed Tomography Equipment and Scan Parameters: an Update from the DVC Challenge

Background: The quality of Digital Volume Correlation (DVC) full-field displacement measurements depends directly on the characteristics of the X-ray Computed Tomography (XCT) equipment, and scan procedures used to acquire the tomographic images. Objective: In this work, we seek to experimentally study the effects of XCT equipment and tomographic scan procedures on the quality of these images for DVC analysis, and to survey the level of DVC error that may be achieved using standard XCT operating procedures. Methods: Six participants in an interlaboratory study acquired high-quality XCT scans of a syntactic foam before and after rigid body motion. The resulting images were correlated using commercial DVC software to quantify error sources due to random image noise, reconstruction artifacts, as well as systematic spatial or temporal distortion. Results: In the absence of rigid body motion, the standard deviation of the displacement measurements ranged from 0.012 to 0.043 voxels using a moderate subvolume size, indicating that subvoxel measurement resolution could readily be achieved with a variety of XCT equipment and scan recipes. Comparison of consecutive scans without rigid body motion showed transient dilatational displacement gradients due to self-heating of the X-ray source and/or thermal expansion of the foam. Evaluation of the scans after rigid body motion showed significant, machine-specific spatial distortion in the displacement fields of up to 0.5 voxels; new approaches to remove this error need to be developed. Conclusions: Analysis of the scan protocols used in the interlaboratory study, as well as a complementary parametric sensitivity study, showed that the DVC error was strongly influenced by the XCT equipment, but could be mitigated by adjusting the total scan duration.

47 OTHER INSTRUMENTATION↗
DOE OSTI2022

Cool circumgalactic gas in galaxy clusters: connecting the DESI legacy imaging survey and SDSS DR16 Mg ιι absorbers

Herein we investigate the cool gas absorption in galaxy clusters by cross-correlating Mg II absorbers detected in quasar spectra from data release 16 of the Sloan Digital Sky Survey (SDSS) with galaxy clusters identified in the Dark Energy Spectroscopic Instrument (DESI) survey. We find significant covering fractions (⁠1–5percent within r 500 , depending on the chosen redshift interval), ~4–5 times higher than around random sightlines. While the covering fraction of cool gas in clusters decreases with increasing mass of the central galaxy, the total Mg II mass within r 500 is none the less ~10 times higher than for SDSS luminous red galaxies. The Mg II covering fraction versus impact parameter is well described by a power law in the inner regions and an exponential function at larger distances. The characteristic scale of the transition between these two regimes is smaller for large equivalent width absorbers. Cross-correlating Mg II absorption with photo–z selected cluster member galaxies from DESI reveals a statistically significant connection. The median projected distance between Mg II absorbers and the nearest cluster member is ~200 kpc, compared to ~500 kpc in random mocks with the same galaxy density profiles. We do not find a correlation between Mg II strength and the star formation rate of the closest cluster neighbour. This suggests that cool gas in clusters, as traced by Mg II absorption, is: (i) associated with satellite galaxies, (ii) dominated by cold gas clouds in the intracluster medium, rather than by the interstellar medium of galaxies, and (iii) may originate in part from gas stripped from these cluster satellites in the past.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

From Mouse to Human: Cellular Morphometric Subtype Learned From Mouse Mammary Tumors Provides Prognostic Value in Human Breast Cancer

Mouse models of cancer provide a powerful tool for investigating all aspects of cancer biology. In this study, we used our recently developed machine learning approach to identify the cellular morphometric biomarkers (CMB) from digital images of hematoxylin and eosin (H&E) micrographs of orthotopic Trp53-null mammary tumors (n = 154) and to discover the corresponding cellular morphometric subtypes (CMS). Of the two CMS identified, CMS-2 was significantly associated with shorter survival (p = 0.0084). We then evaluated the learned CMB and corresponding CMS model in MMTV-Erbb2 transgenic mouse mammary tumors (n = 53) in which CMS-2 was significantly correlated with the presence of metastasis (p = 0.004). We next evaluated the mouse CMB and CMS model on The Cancer Genome Atlas breast cancer (TCGA-BRCA) cohort (n = 1017). Kaplan–Meier analysis showed significantly shorter overall survival (OS) of CMS-2 patients compared to CMS-1 patients (p = 0.024) and added significant prognostic value in multi-variable analysis of clinical and molecular factors, namely, age, pathological stage, and PAM50 molecular subtype. Thus, application of CMS to digital images of routine workflow H&E preparations can provide unbiased biological stratification to inform patient care.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2021

Angular clustering properties of the DESI QSO target selection using DR9 Legacy Imaging Surveys

ABSTRACT The quasar target selection for the upcoming survey of the Dark Energy Spectroscopic Instrument (DESI) will be fixed for the next 5 yr. The aim of this work is to validate the quasar selection by studying the impact of imaging systematics as well as stellar and galactic contaminants, and to develop a procedure to mitigate them. Density fluctuations of quasar targets are found to be related to photometric properties such as seeing and depth of the Data Release 9 of the DESI Legacy Imaging Surveys. To model this complex relation, we explore machine learning algorithms (random forest and multilayer perceptron) as an alternative to the standard linear regression. Splitting the footprint of the Legacy Imaging Surveys into three regions according to photometric properties, we perform an independent analysis in each region, validating our method using extended Baryon Oscillation Spectroscopic Survey (eBOSS) EZ-mocks. The mitigation procedure is tested by comparing the angular correlation of the corrected target selection on each photometric region to the angular correlation function obtained using quasars from the Sloan Digital Sky Survey (SDSS) Data Release 16. With our procedure, we recover a similar level of correlation between DESI quasar targets and SDSS quasars in two-thirds of the total footprint and we show that the excess of correlation in the remaining area is due to a stellar contamination that should be removed with DESI spectroscopic data. We derive the Limber parameters in our three imaging regions and compare them to previous measurements from SDSS and the 2dF QSO Redshift Survey.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

Characterizing the target selection pipeline for the Dark Energy Spectroscopic Instrument Bright Galaxy Survey

ABSTRACT We present the steps taken to produce a reliable and complete input galaxy catalogue for the Dark Energy Spectroscopic Instrument (DESI) Bright Galaxy Survey (BGS) using the photometric Legacy Survey DR8 DECam. We analyse some of the main issues faced in the selection of targets for the DESI BGS, such as star–galaxy separation, contamination by fragmented stars and bright galaxies. Our pipeline utilizes a new way to select BGS galaxies using Gaia photometry and we implement geometrical and photometric masks that reduce the number of spurious objects. The resulting catalogue is cross-matched with the Galaxy And Mass Assembly (GAMA) survey to assess the completeness of the galaxy catalogue and the performance of the target selection. We also validate the clustering of the sources in our BGS catalogue by comparing with mock catalogues and the Sloan Digital Sky Survey (SDSS) data. Finally, the robustness of the BGS selection criteria is assessed by quantifying the dependence of the target galaxy density on imaging and other properties. The largest systematic correlation we find is a 7 per cent suppression of the target density in regions of high stellar density.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

Probe the Localized Electrochemical Environment Effects and Electrode Reaction Dynamics for Metal Batteries using In Situ 3D Microscopy

Uncontrollable dendrite growth is closely related to non-uniform reaction environments. However, there is a lack of understanding and analysis methods to probe the localized electrochemical environment (LEE). Here the effects of the LEE are investigated, including localized ion concentrations, current density, and electric potential, on metal plating/stripping dynamics and dendrite minimization. A novel in situ 3D microscopy technique is developed to image the morphology dynamics and deposition rate of Zn plating/stripping processes on 3D Zn–Mn anodes. Using the in situ 3D microscope, the electrode morphology changes during the reactions are directly imaged and Zn deposition rate maps at different time points are obtained. It is found that reaction kinetics are highly correlated to LEE and electrode morphology. To further quantify the LEE effects, the digital twin technique is employed that allows the accurate calculation of the electrochemical environments, such as localized ion concentrations, current density, and electric potential, which cannot be directly measured from experiments. We found that the curvature of the 3D electrode surface determines the LEE and significantly influences reaction kinetics. This provides a new strategy to minimize the dendrite formation by designing and optimizing the 3D geometry of the electrode to control the LEE.

36 MATERIALS SCIENCE↗
DOE OSTI2022

The physical connection between central stellar surface density and stellar spin in SAMI and MaNGA nearby galaxies

The stellar surface density within the inner 1 kpc (Σ 1 ) has become a popular tool for understanding the growth of galaxies and its connection with the quenching of star formation. The emerging picture suggests that building a central dense core is a necessary condition for quenching. However, it is not clear whether changes in Σ 1 trace changes in stellar kinematics and the growth of dispersion-dominated bulges. In this paper, we combine imaging from the Sloan Digital Sky Survey with stellar kinematics from the Sydney-AAO Multi-object Integral-field unit and Mapping Nearby Galaxies at Apache Point Observatory surveys to quantify the correlation between Σ 1 and the proxy for stellar spin parameter within one effective radius (λ re ) for 1599 nearby galaxies. We show that, on the star-forming main sequence and at fixed stellar mass, changes in Σ 1 are mirrored by changes in λ re . While forming stars, main-sequence galaxies remain rotationally-dominated systems, with their Σ 1 increasing but their stellar spin staying either constant or slightly increasing. The picture changes below the main sequence, where Σ 1 and λ re are no longer correlated. Passive systems show a narrower range of Σ 1 , but a wider range of λre compared to star-forming galaxies. Our results indicate that, from a structural point of view, passive galaxies are a more heterogeneous population than star-forming systems, and may have followed a variety of evolutionary paths. This also suggests that, if dispersion-dominated bulges still grow significantly at z ~ 0, this generally takes place during, or after, the quenching phase.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2020

Connecting SDSS central galaxies to their host haloes using total satellite luminosity

ABSTRACT The total luminosity of satellite galaxies around a central galaxy, Lsat, is a powerful metric for probing dark matter haloes. We utilize data from the Sloan Digital Sky Survey and DESI Legacy Imaging Surveys to explore the relationship between Lsat and galaxy properties for a sample of 117 966 central galaxies with z ≤ 0.15. At fixed stellar mass, we find that every galaxy property we explore correlates with Lsat, suggesting that dark matter haloes can influence them. We quantify these correlations by computing the mutual information between Lsat and secondary properties and explore how this varies as a function of stellar mass and star-formation activity. We find that absolute r-band magnitude correlates more strongly with Lsat than stellar mass across all galaxy populations; and that effective radius, velocity dispersion, and Sérsic index do so as well for star-forming and quiescent galaxies. Lsat is influenced by the mass of the host halo as well as the halo formation history, with younger haloes having higher Lsat. Lsat cannot distinguish between these two effects, but measurements of galaxy large-scale environment can break this degeneracy. For star-forming centrals, Reff, σv, and Sérsic index all correlate with large-scale density, implying that the halo age affects these properties. For quiescent galaxies, all secondary properties are independent of environment, implying that correlations with Lsat are driven only by halo mass. These results are a significant step forward in quantifying the extent of the galaxy–halo connection, and present a new test of galaxy formation models.

Alpaslan, Mehmet↗
DOE OSTI2023

Hyper Suprime-Cam Year 3 results: Measurements of clustering of SDSS-BOSS galaxies, galaxy-galaxy lensing, and cosmic shear

Here we utilize the Sloan Digital Sky Survey Baryon Oscillation Spectroscopic Survey (SDSS-BOSS) galaxies and its overlap with approximately 416 sq degrees of deep grizy-band imaging from the Subaru Hyper Suprime-Cam Survey (HSC). We perform measurements of three two-point correlations which form the basis of the cosmological inference presented in our companion papers, Miyatake et al. and Sugiyama et al. We use three approximately volume limited subsamples of spectroscopic galaxies by their i-band magnitude from the SDSS-BOSS: LOWZ (0.1 < z < 0.35), CMASS1 (0.43 < z < 0.55) and CMASS2 (0.55 < z < 0.7), respectively. We present high signal-to-noise ratio measurements of the projected correlation functions of these galaxies, which is expected to be proportional to the projected matter correlation function on large scales with a proportionality constant dependent on the bias of galaxies. In order to help break the degeneracy between the amplitude of the matter correlation and the bias of these spectroscopic galaxies, we use the distortions of the shapes of fainter galaxies in HSC due to weak gravitational lensing, to measure the galaxy-galaxy lensing signal, which probes the projected galaxy-matter cross-correlation function of the SDSS-BOSS galaxies. We also measure the cosmic shear correlation functions from HSC galaxies which is related to the projected matter correlation function. We demonstrate the robustness of our measurements by subjecting each of them to a variety of systematic tests. Our use of a single sample of HSC source galaxies is crucial to calibrate any residual systematic biases in the inferred redshifts of our galaxies. We also describe the construction of a suite of mocks: (i) spectroscopic galaxy catalogs which obey the clustering and abundance of each of the three SDSS-BOSS subsamples, and (ii) galaxy shape catalogs which obey the footprint of the HSC survey and have been appropriately sheared by the large-scale structure expected in a Lambda Cold Dark Matter model. Finally, we use these mock catalogs to compute the covariance of each of our observables.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

An all-digital associated particle imaging system for the 3D determination of isotopic distributions

Associated particle imaging (API) is a non-destructive nuclear technique for the 3D determination of isotopic distributions. By detecting the alpha particle associated with the emitted neutron in the deuterium–tritium fusion reaction with a position- and time-resolving detector, the direction of the 14.1 MeV neutron and its time of emission can be determined. Employing this method, isotope characteristic gamma rays emitted in inelastic neutron scattering events can be correlated with the neutron interaction location. Here, an API system consisting of a sealed-type neutron generator, gamma detectors, and a position-sensitive alpha detector was designed, constructed, and characterized. The system was tested with common soil elements and shown to be sensitive to 12 C, 16 O, 28 Si, 27 Al, and 56 Fe. New aspects of our approach are the use of a yttrium–aluminum–perovskite scintillator, using a sapphire window instead of a fiber-optic faceplate for light transport to the photomultiplier, and the all-digital data acquisition system. We present a description of the system with simulations and experimental results that show a position resolution on the alpha detector of 1 mm, a depth resolution using a LaBr 3 detector of 6.2 cm, and an angular resolution of 4.5°. Additionally, we present single-element gamma response measurements for the elements mentioned above together with a comparison to Monte Carlo simulations (MCNP6).

47 OTHER INSTRUMENTATION↗
DOE OSTI2021

Deep learning for Alzheimer's disease: Mapping large-scale histological tau protein for neuroimaging biomarker validation

Abnormal tau inclusions are hallmarks of Alzheimer's disease and predictors of clinical decline. Several tau PET tracers are available for neurodegenerative disease research, opening avenues for molecular diagnosis in vivo. However, few have been approved for clinical use. Understanding the neurobiological basis of PET signal validation remains problematic because it requires a large-scale, voxel-to-voxel correlation between PET and (immuno) histological signals. Large dimensionality of whole human brains, tissue deformation impacting co-registration, and computing requirements to process terabytes of information preclude proper validation. We developed a computational pipeline to identify and segment particles of interest in billion-pixel digital pathology images to generate quantitative, 3D density maps. The proposed convolutional neural network for immunohistochemistry samples, IHCNet, is at the pipeline's core. We have successfully processed and immunostained over 500 slides from two whole human brains with three phospho-tau antibodies (AT100, AT8, and MC1), spanning several terabytes of images. Our artificial neural network estimated tau inclusion from brain images, which performs with ROC AUC of 0.87, 0.85, and 0.91 for AT100, AT8, and MC1, respectively. Introspection studies further assessed the ability of our trained model to learn tau-related features. We present an end-to-end pipeline to create terabytes-large 3D tau inclusion density maps co-registered to MRI as a means to facilitate validation of PET tracers.

60 APPLIED LIFE SCIENCES↗