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At least 343 records · Page 19

GC/MS Method Development for Separating Lunar Volatile Ice Simulant Headspace Gases

Various investigators propose the lunar surface contains widely distributed volatiles, especially water- like species, i.e. OH and H2O. Surface volatiles are theorized to exist as a hydrated regolith layer, concentrated in extremely cold polar permanently shadowed regions (PSR), and/or solar wind implantation reservoirs in lunar glasses. The proposed sources of lunar surface volatiles range from cometary impacts, solar wind, or a supply present during moon formation. Future Artemis missions aim to collect and return the samples containing volatiles collected near lunar polar craters or PSRs. We, as advanced curation scientists, are responsible for developing techniques and methodologies for preserving returned sample integrity as much as possible. Pristine volatile-bearing samples are invaluable to the scientific community seeking to unravel the history of the solar system. Realistically, a sample will experience alteration during collection, transportation back to earth, and storage. The Planetary Exploration and Astromaterials Research Lab (PEARL) seeks to understand temperature and pressure effects on high-fidelity volatile-containing regolith simulants, the foundation for the future of cold curation. This abstract outlines the separation, identification, and quantification of headspace gases over volatile ice feed stock material using gas chromatography/mass spectrometry (GC/MS). Preliminary objectives concentrated on sample handling, reproducibility, and understanding the elution characteristics for each analyte. Initial GC/MS method development experiments utilized diluted static headspace sample preparation. Diluted samples were used because sampling headspace gases directly from a vial containing liquid analyte resulted in overloading of the column and detector. Overloading is evident based on chromatogram peak shapes and instrument contamination, or carry over, between experiments. A mixture of three alcohols were used for a majority of the sample handling and reproducibility studies. Reproducibility was tested via multiple users, calibration curves, and check standards. Stock solutions of condensed lunar volatile analytes included methanol, ammonia in methanol, hydrogen sulfide in water, and an equal volume mixture of methanol, ethanol, and isopropanol. Current samples use room air as the headspace sample matrix, however future experiments will incorporate an inert purge gas, such as argon or nitrogen. Three mL of each analyte solution were capped in separate 20 mL crimp top GC vials. Dilutions were carried out by removing an aliquot of headspace gases with a calibrated 1 mL gastight syringe and immediately transferring to a 20 mL capped crimp top vial. The GC/MS is a Thermo Fisher Trace 1310/ISQ 7000 with a TriPlus RSH autosampler and split/splitless injector module. The experiments outlined in this abstract use the following hardware: a 2.5 mL gastight headspace syringe tool, 1 mm ID x 78.5 mm length ultra-inert straight injection liner, and a TG-BondQ 30 m × 0.32 mm × 10 μm column. Various parameters, such as hardware selection and the temperature, pressure, and split ratio set points, continue to evolve as the overall experiment is refined. Diluted headspace chromatograms were collected for the individual stock solutions. Retention times, peak shapes, and mass spectra were evaluated and added to the data processing method for each molecule of interest. Figure 1 shows the total ion chromatograms for the three major lunar volatile simulant stock solutions: methanol, 7 N ammonia in methanol, and 0.4% hydrogen sulfide in water. Tailing peak shapes for ammonia (2.98 min rt) and water (4.06 min rt) indicate the molecules are not properly eluting from the selected column with the current separation method. Additionally, hydrogen sulfide and ammonia have overlapping peak windows, which could impact quantification. Ongoing experiments aim to address the peak shape and overlapping via the separation method and hardware selection. Sample preparation reproducibility experiments used stock solution containing equal volumes of a non- interactive mixture of methanol, ethanol, and isopropanol. Mass spectrum ion traces were used to identify and quantify all three alcohols. Peaks were automatically detected, identified, and integrated through the mass spectra detection and processing parameters. Calibration response curves and check standards were used to evaluate the validity of the sample preparation procedure. Figure 2 shows the methanol chromatogram peak area versus total headspace dilution volume transferred from the alcohol mixture vial. The calibration response curves and check standards validate sample preparation procedure. Continuing data analysis efforts are working towards correlating the peak area and instrument response factor to the headspace analyte concentration and condensed phase composition. Static headspace gas chromatography theory relies on Dalton’s law, Raoult’s law, Henry’s Law, and the Kolb and Ettre equation to associate peak area to the analyte composition in a non-ideal solution. Equation 1 is a simplified expression derived from the aforementioned theories. Future experiments involve liquid injections of the individual stock solutions, liquid and headspace analysis of various stock solution combinations, and the addition of regolith simulants to the mixtures. Temperature is another variable expected to affect reaction rates and will be explored.

Cecilia L. Amick↗

Time series comparisons in Deep Space Network

The Deep Space Network (DSN) is NASA’s international array of antennas that support interplanetary spacecraft missions. DSN provides radar and radio astronomy observations that enhance our understanding of the solar system and the larger universe. A track is a block of continuous multi-dimensional time series from the beginning to end of DSN communication with the target spacecraft, containing 129 monitor data items lasting several hours at a frequency of 0.2-1Hz. Monitor data on each track reports on the performance of specific spacecraft operations and the DSN itself. DSN is receiving signals from 32 spacecraft across the solar system. DSN has pressure to reduce costs while maintaining the quality of support for DSN mission users. DSN operators need to simultaneously monitor multiple tracks and identify anomalies in real time. DSN has seen that as the number of missions increases, the data that needs to be processed increases over time. In this project, we look at the last 8 years of data for analysis. Any anomaly in the track indicates a problem with either the spacecraft, DSN equipment, or weather conditions. DSN operators typically write “discrepancy reports” for further analysis. It is recognized that it would be quite helpful to identify 10 similar historical tracks out of the huge database to quickly find/match anomalies. This tool has three functions: (1) identification of the top 10 similar historical tracks, (2) detection of anomalies compared to the reference normal track, and (3) comparison of statistical differences between two given tracks. The requirements for these features were confirmed by survey responses from 21 DSN operators and engineers. The preliminary machine learning model has shown promising performance (AUC=0.92). We plan to increase the number of data sets and perform additional testing to improve performance further before its planned integration into the Track Visualizer to assist DSN field operators and engineers.

Rebbapragada, Umaa↗

A Decision Support System to Compile Environmental Mitigations from Hydropower Licensing Documents

The process of deciphering, extracting, and compiling information from texts dense with domain-specific terminology and technical jargon is a challenging endeavor. It demands considerable expertise and deep knowledge in the respective field, resulting in a labor-intensive process when executed by humans. Furthermore, the task of identifying multiple class labels in extensive texts presents a challenge due to intra- and inter-reader variability, making the process time-consuming and costly.We’re introducing a user-friendly graphical interface, fortified with a BERT model-powered decision support system. This advanced system aims to augment efficiency, curtail data collection time, and sustain high precision in data acquisition. It is instrumental in deciphering and synthesizing intricate texts teeming with a spectrum of expressions, even within similar mitigation categories. Such tasks traditionally demand substantial human effort and specialized knowledge in the domain.Our system is specifically engineered for the task of extracting environmental mitigation information to promote sustainable hydropower development from licenses issued by the Federal Energy Regulatory Commission (FERC). These license documents are comprehensive, each containing over 15,000 words and requiring the identification of 135 different class labels. We anticipate that our system will boost reading speed, improve the consistency of classification outputs among readers, and contribute to the development of a robust scientific database of environmental mitigations associated with the 2,000+ non-federal hydropower facilities licensed by FERC in the United States.

Yoon, Hong-Jun [ORNL] (ORCID:0000000254505878)↗

Evaluating User Errors and Temporal Trends in Marine Fish Communities Using 360-Degree Underwater Photography

The use of environmental DNA (eDNA) sampling has been proposed as a complementary method to monitor fish species in marine environments, offering a non-invasive and potentially more efficient approach to marine species observations. eDNA monitoring could be especially useful in and around sites targeted for marine energy generation as these regions need regular monitoring that would be impractical with traditional techniques. Before we can fully rely upon eDNA, we must first verify its accuracy against other proven methods, such as the use of underwater photography. In this study, I deployed a 360-degree camera in the tidal channel of Sequim Bay once a month during several hours overlapping slack tide. I investigated how having multiple people identify and count fish on underwater images could affect the overall results. Using chi square tests in R, I compared my fish identifications and counts to those made by another intern on the same images recorded in August. I found significant differences in the number of species identified and the total individual counts between the two different datasets. I also tested the statistical differences in both Shannon diversity and Pielou evenness indices between the August, September, and November camera deployments using a Hutcheson t-test. Only one significant difference was found in the Shannon index comparisons, and none were found between the Pielou evenness comparisons. These findings show that if multiple identifiers are used to process underwater images, quality control checks must be made to reduce the potential for error. This also points toward the possibility to leverage more advanced image analysis processes, such as automated image analysis software. The findings from this study also show that the dynamics of marine fish communities can vary over a few months; however, further analysis is needed to determine the extent of the seasonal changes in Sequim Bay.

59 BASIC BIOLOGICAL SCIENCES↗

JMISR INteractive eXplorer

MISR (Multi-angle Imaging SpectroRadiometer) INteractive eXplorer (MINX) is an interactive visualization program that allows a user to digitize smoke, dust, or volcanic plumes in MISR multiangle images, and automatically retrieve height and wind profiles associated with those plumes. This innovation can perform 9-camera animations of MISR level-1 radiance images to study the 3D relationships of clouds and plumes. MINX also enables archiving MISR aerosol properties and Moderate Resolution Imaging Spectroradiometer (MODIS) fire radiative power along with the heights and winds. It can correct geometric misregistration between cameras by correlating off-nadir camera scenes with corresponding nadir scenes and then warping the images to minimize the misregistration offsets. Plots of BRF (bidirectional reflectance factor) vs. camera angle for points clicked in an image can be displayed. Users get rapid access to map views of MISR path and orbit locations and overflight dates, and past or future orbits can be identified that pass over a specified location at a specified time. Single-camera, level-1 radiance data at 1,100- or 275- meter resolution can be quickly displayed in color using a browse option. This software determines the heights and motion vectors of features above the terrain with greater precision and coverage than previous methods, based on an algorithm that takes wind direction into consideration. Human interpreters can precisely identify plumes and their extent, and wind direction. Overposting of MODIS thermal anomaly data aids in the identification of smoke plumes. The software has been used to preserve graphical and textural versions of the digitized data in a Web-based database.

Nelson, David L.↗

New Data Source for Studying and Modelling the Topside Ionosphere

The existing uncertainties about density profiles in the topside ionosphere, i.e., in the height regime from hmF2 to approx. 2000 km, requires the search for new data sources. Millions of ionograms had been recorded by the ISIS and Alouette satellites in the sixties and seventies, that never were analyzed in terms of electron density profiles. In recent years an effort started to digitize the analog recordings to prepare the ionograms for computerized analysis. This paper shows how the digital ionograms are processed and the electron density profiles (from satellite orbit altitude, 1400 km for ISIS-2, down to the F peak) are calculated. The most difficult part of the task is the automatic scaling of the echo traces in the ISIS ionograms. Unlike the ionograms from modern ionosondes, the ISIS ionograms do not identify the wave polarization of the different echo traces, so physical logic must be applied to identify the ordinary ()) and extraordinary (X) traces, and this is not always successful. Characteristic resonance features seen in the topside ionograms occur at the gyro and plasma frequencies. An elaborate scheme was developed to identify these resonance frequencies in order to determine the local plasma and gyrofrequencies. This information helps in the identification of the O and X traces, and it provides the starting density of the electron density profile. The inversion of the echo traces into electron density profiles uses the same modified Chebyshev polynomial fitting technique that is successfully applied in the ground-based Digisonde network. The automatic topside ionogram scaler with true height algorithm TOPIST is successfully scaling approx. 70% of the ionograms. An 'editing process' is available to manually scale the more difficult ionograms. The home page for the ISIS project is at http://nssdc.gsfc.nasa.gov/space/isis/isis-status.html. It provides access to as of January 2001, 3000,000 digitized ISIS ionogram data and to related software. A search page lets users select data location, time, and a host of other search criteria. The automated processing of the ISIS ionograms will begin later this year and the electron density profiles will be made available from the project home page. The ISIS data restoration efforts are supported through NASA's Applied Systems and Information Research Program.

Huang, Xue-Qin↗

FBI fingerprint identification automation study: AIDS 3 evaluation report. Volume 6: Environmental analysis

The results of the analysis of the external environment of the FBI Fingerprint Identification Division are presented. Possible trends in the future environment of the Division that may have an effect on the work load were projected to determine if future work load will lie within the capability range of the proposed new system, AIDS 3. Two working models of the environment were developed, the internal and external model, and from these scenarios the projection of possible future work load volume and mixture was developed. Possible drivers of work load change were identified and assessed for upper and lower bounds of effects. Data used for the study were derived from historical information, analysis of the current situation and from interviews with various agencies who are users of or stakeholders in the present system.

Mulhall, B. D. L.↗

Database activity in the Italian Astronet: DIRA 2

The development and utilization of informational archives and databases started, in the Italian Astronet Project, in the middle of 1983. In that year, a small group of astronomers and some more technical people met together in an Astronet working group, with a common, painful experience in managing astronomical catalogues and archives with computers. Nowadays, some years later, some software packages and the contents of both, a relative general database and several local databases represent the work and the effort of the group. The systems have been conceived and developed keeping in mind the original goal of the group: to allow the single atronomer to make a free use of original data. The main package (DIRA) was rewritten, after some years of use, to fully take advantage of the several suggestions of the astronomer that used it and gathered experiences in the astronomical catalog's management. A more technical goal was to install the whole system, born and developed in the vms environment, on unix and unix-like systems. This new version, DIRA2, has a new user interface, a query language with SQL style commands supporting numerical and character functions also and a set of commands to create new catalogues from existing data. The graphics commands are also more powerful with respect to the previous version. DIRA (and DIRA2 of course) philosophy and design are very simple and proved to be very appreciated by astronomers, namely, to normalize and homogenize, at minimum, astronomical catalogues, to collect satisfactory astronomical documentation on their contents and, finally, to allow an astronomical approach to the dialogue with the database. DIRA2 is currently used in most Italian astronomical institutes to retrieve data from a still growing database of about 140 well documented and controlled astronomical catalogues, for the identification of objects and the preparation of a 'medium size' survey, in astrometry and in the creation of new catalogues.

Benacchio, L.↗

Advanced transportation system studies technical area 2 (TA-2): Heavy lift launch vehicle development: Program Cost estimates - volume 3

The purpose of the TA-2 contract was to provide advanced launch vehicle concept definition and analysis to assist NASA in the identification of future launch vehicle requirements. Contracted analysis activities included vehicle sizing and performance analysis, subsystem concept definition, propulsion subsystem definition (foreign and domestic), ground operations and facilities analysis, and life cycle cost estimation. The basic period of performance of the TA-2 contract was from May 1992 through May 1993. No-cost extensions were exercised on the contract from June 1993 through July 1995. This document is part of the final report for the TA-2 contract. The final report consists of three volumes: Volume 1 is the Executive Summary, Volume 2 is Technical Results, and Volume 3 is Program Cost Estimates. The document-at-hand, Volume 3, provides a work breakdown structure dictionary, user's guide for the parametric life cycle cost estimation tool, and final report developed by ECON, Inc., under subcontract to Lockheed Martin on TA-2 for the analysis of heavy lift launch vehicle concepts.

McCurry, J. B.↗

Microbial Optical Data Processing: A Key Step in the Metabolic Assessment of Lunar Explorer Instrument for Space Biology Applications (LEIA) and Biosentinel’s Payload Data

The BioSensor payload platform on BioSentinel and LEIA autonomously collects optical data from microbial model organisms in liquid culture. The BioSensor is designed to monitor metabolic activity using absorbance measurements of cell density and alamarBlue, a readily available colorimetric redox indicator dye. BioSentinel, a pioneering NASA CubeSat, uses yeast to study deep space radiation. LEIA investigates radiation and lunar gravity response. The experimental setup includes 16 wells equipped with three LEDs (570, 630, and 850 nm) and their corresponding photodetectors. One well is a calibration control without biology while the rest have desiccated cultures. Autonomous rehydration initiates the experiment. Data from the BioSensor are received from the flight and ground units, enabling comparison to uncover location-based metabolic rate variations. This study presents a Python Jupyter notebook developed for efficient data processing of multiple CSV files containing date and time columns, temperature, and well illumination data. It offers a user-friendly interface while maintaining computational power, automatically recognizing and iteratively processing data files in a user-input path. A Hampel filter with a short window eliminates outlier artifacts from sensor dropout. Because absorbance is a relative measurement, conversion from raw illumination requires defining a “blank” value, so the first data points are averaged to provide the necessary denominator. A cube-root function correction mitigates undesired drift caused by air pockets during the fluidic card filling phase, maintaining optical path length consistency. Beer-Lambert's law is applied to further convert absorbance values to cell and dye form concentrations, the desired science parameters. The processed data are saved and visualized as SVG plots. Future plans include extracting specific science parameters from the processed data like growth rate and metabolic rate, and identification of features corresponding to metabolic and phenotypic shifts such as starvation, shifts from aerobic to anaerobic growth, and osmotic stresses.

Space biology↗

Adapting Traditional Hazards Analysis Methods to Address Cyber Risks

Traditional hazards analysis (HA) methods, originally developed to address physical and operational risks, often fall short when it comes to identifying and mitigating cyber threats. These cyber threats pose unique and evolving risks to critical infrastructure and industrial control systems (ICS). This report explores the integration of Cyber-Informed Engineering (CIE) principles into existing HA methods to enhance their ability to address cyber-induced risks. CIE provides organizations with a practical, cost-effective approach to closing the gap between traditional HA methods and the need for cyber risk mitigation. By leveraging existing safety processes and controls, CIE allows users to examine and mitigate cyber vulnerabilities without overhauling existing HA methods. This report identifies areas where HA and CIE naturally align and where their approaches diverge. It emphasizes how CIE principles can be used to adapt HA methods, broadening their scope to include cyber risks and enabling the mitigation of cyber- induced impacts alongside traditional hazards and failure scenarios. This report examines how CIE can be applied across various HA methods—such as Hazard and Operability Studies (HAZOP), Probabilistic Risk Assessment (PRA), Failure Modes and Effects Analysis (FMEA), Systems-Theoretic Process Analysis (STPA), Hazard and Consequence Analysis for Digital Systems (HAZCADS), and Layers of Protection Analysis (LOPA). It provides strategies for integrating CIE to strengthen the identification, assessment, and mitigation of cyber-induced risks. The findings offer a structured entry point for organizations to embed CIE concepts into hazards and safety analyses, as well as broader engineering processes, ultimately supporting the design and operation of a more resilient infrastructure.

42 ENGINEERING↗

Adapting Traditional Hazards Analysis Methods to Address Cyber Risks

Traditional hazards analysis (HA) methods, originally developed to address physical and operational risks, often fall short when it comes to identifying and mitigating cyber threats. These cyber threats pose unique and evolving risks to critical infrastructure and industrial control systems (ICS). This report explores the integration of Cyber-Informed Engineering (CIE) principles into existing HA methods to enhance their ability to address cyber-induced risks. CIE provides organizations with a practical, cost-effective approach to closing the gap between traditional HA methods and the need for cyber risk mitigation. By leveraging existing safety processes and controls, CIE allows users to examine and mitigate cyber vulnerabilities without overhauling existing HA methods. This report identifies areas where HA and CIE naturally align and where their approaches diverge. It emphasizes how CIE principles can be used to adapt HA methods, broadening their scope to include cyber risks and enabling the mitigation of cyber- induced impacts alongside traditional hazards and failure scenarios. This report examines how CIE can be applied across various HA methods—such as Hazard and Operability Studies (HAZOP), Probabilistic Risk Assessment (PRA), Failure Modes and Effects Analysis (FMEA), Systems-Theoretic Process Analysis (STPA), Hazard and Consequence Analysis for Digital Systems (HAZCADS), and Layers of Protection Analysis (LOPA). It provides strategies for integrating CIE to strengthen the identification, assessment, and mitigation of cyber-induced risks. The findings offer a structured entry point for organizations to embed CIE concepts into hazards and safety analyses, as well as broader engineering processes, ultimately supporting the design and operation of a more resilient infrastructure.

42 - ENGINEERING↗

Automated Firearms Identification System (AFIDS), phase 1

Items critical to the future development of an automated firearms identification system (AFIDS) have been examined, with the following specific results: (1) Types of objective data, that can be utilized to help establish a more factual basis for determining identity and nonidentity between pairs of fired bullets, have been identified. (2) A simulation study has indicated that randomly produced lines, similar in nature to the individual striations on a fired bullet, can be modeled and that random sequences, when compared to each other, have predictable relationships. (3) A schematic diagram of the general concept for AFIDS has been developed and individual elements of this system have been briefly tested for feasibility. Future implementation of such a proposed system will depend on such factors as speed, utility, projected total cost and user requirements for growth. The success of the proposed system, when operational, would depend heavily on existing firearms examiners.

Blackwell, R. J.↗

Commercial users panel

The discussions of motives and requirements for telerobotics application demonstrated that, in many cases, lack of progress was a result not of limited opportunities but of inadequate mechanisms and resources for promoting opportunities. Support for this conclusion came from Telerobotics, Inc., one of the few companies devoted primarily to telerobot systems. They have produced units for such diverse applications as nuclear fusion research, particle accelerators, cryogenics, firefighting, marine biology/undersea systems and nuclear mobile robotics. Mr. Flatau offered evidence that telerobotics research is only rarely supported by the private sector and that it often presents a difficult market. Questions on the mechanisms contained within the NASA technology transfer process for promoting commercial opportunities were fielded by Ray Gilbert and Tom Walters. A few points deserve emphasis: (1) NASA/industry technology transfer occurs in both directions and NASA recognizes the opportunity to learn a great deal from industry in the fields of automation and robotics; (2) promotion of technology transfer projects takes a demand side approach, with requests to industry for specific problem identification. NASA then proposes possible solutions; and (3) comittment ofmotivated and technically qualified people on each end of a technology transfer is essential.

Byrd, Joseph S.↗

Proposed Development of NASA Glenn Research Center's Aeronautical Network Research Simulator

Accurate knowledge and understanding of data link traffic loads that will have an impact on the underlying communications infrastructure within the National Airspace System (NAS) is of paramount importance for planning, development and fielding of future airborne and ground-based communications systems. Attempting to better understand this impact, NASA Glenn Research Center (GRC), through its contractor Computer Networks & Software, Inc. (CNS, Inc.), has developed an emulation and test facility known as the Virtual Aircraft and Controller (VAC) to study data link interactions and the capacity of the NAS to support Controller Pilot Data Link Communications (CPDLC) traffic. The drawback of the current VAC test bed is that it does not allow the test personnel and researchers to present a real world RF environment to a complex airborne or ground system. Fortunately, the United States Air Force and Navy Avionics Test Commands, through its contractor ViaSat, Inc., have developed the Joint Communications Simulator (JCS) to provide communications band test and simulation capability for the RF spectrum through 18 GHz including Communications, Navigation, and Identification and Surveillance functions. In this paper, we are proposing the development of a new and robust test bed that will leverage on the existing NASA GRC's VAC and the Air Force and Navy Commands JCS systems capabilities and functionalities. The proposed NASA Glenn Research Center's Aeronautical Networks Research Simulator (ANRS) will combine current Air Traffic Control applications and physical RF stimulation into an integrated system capable of emulating data transmission behaviors including propagation delay, physical protocol delay, transmission failure and channel interference. The ANRS will provide a simulation/stimulation tool and test bed environment that allow the researcher to predict the performance of various aeronautical network protocol standards and their associated waveforms under varying density conditions. The system allows the user to define human-interactive and scripted aircraft and controller models of various standards, such as (but not limited to) Very High Frequency Digital Link (VDL) of various modes.

Nguyen, Thanh C.↗

Discovering methylated DNA motifs in bacterial nanopore sequencing data with MIJAMP

Abstract Bacterial DNA methylation is involved in diverse cellular functions, including modulation of gene expression, DNA repair, and restriction–modification systems for defense against viruses and other foreign DNA. Restriction systems hinder efforts to engineer organisms to produce fuels and chemicals from waste and renewable feedstocks by degrading DNA during transformation. Methylome analysis allows identification of motifs within a bacterial chromosome that may be targeted by native restriction enzymes. Further expression of the corresponding methyltransferases in Escherichia coli allows plasmid DNA to be protected from restriction in the target organism, thereby drastically enhancing transformation efficiency. Nanopore sequencing can detect methylated bases, but software is needed to transform modified base coordinates into methylated motifs. Here, we develop MIJAMP (MIJAMP Is Just A MethylBED Parser), a software package that was developed to discover methylated motifs from the output of ONT’s Modkit or other data in the methylBED format. MIJAMP employs a human-driven refinement strategy that empirically validates all motifs against genome-wide methylation data, thus eliminating incorrect motifs. MIJAMP also reports methylation data on specific, user-defined motifs. Using MIJAMP, we determined the methylated motifs both in a control strain (wild-type E. coli) and in Synecococcus sp. strain PCC7002, laying the foundation for improved transformation in this organism. MIJAMP is available at https://code.ornl.gov/alexander-public/mijamp/. One Sentence Summary: Here we describe software written to discover DNA methylation motifs from nanopore sequencing data.

59 BASIC BIOLOGICAL SCIENCES↗

Documentation for the machine-readable AGK3-BD and BD-AGK3 cross-index catalogues

The machine-readable cross identification catalogs were prepared by extracting AGK3 and BD numbers from the magnetic tape version of the AGK3 Catalog. After preparation of the AGK3-BD file, which contains all stars in the AGK3 catalog, the file was sorted according to BD number and rearranged so that the BD number occurs at the beginning of each record. During the sorting operation, all AGK3 stars having no BD numbers were omitted. The BD-AGK3 file is especially useful for finding BD stars in the AGK3 catalog, since precession has moved stars across declination boundaries and it often was necessary to examine more than one AGK3 zone to locate a BD star in the catalog. The contents of the cross index files is described so that users can read and process the tape without problems, guesswork, or consulting the parent catalog.

Warren, W. H., Jr.↗

Improved modeling of GPS selective availability

Selective Availability (SA) represents the dominant error source for stand-alone users of the Global Positioning System (GPS). Even for DGPS, SA mandates the update rate required for a desired level of accuracy in realtime applications. As was witnessed in the recent literature, the ability to model this error source is crucial to the proper evaluation of GPS-based systems. A variety of SA models were proposed to date; however, each has its own shortcomings. Most of these models were based on limited data sets or data which were corrupted by additional error sources. A comprehensive treatment of the problem is presented. The phenomenon of SA is discussed and a technique is presented whereby both clock and orbit components of SA are identifiable. Extensive SA data sets collected from Block 2 satellites are presented. System Identification theory then is used to derive a robust model of SA from the data. This theory also allows for the statistical analysis of SA. The stationarity of SA over time and across different satellites is analyzed and its impact on the modeling problem is discussed.

Braasch, Michael S.↗