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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 37 records · Page 2

Usefulness of LANDSAT data for monitoring plant development and range conditions in California's annual grassland

A network of sampling sites throughout the annual grassland region was established to correlate plant growth in stages and forage production to climatic and other environmental factors. Plant growth and range conditions were further related to geographic location and seasonal variations. A sequence of LANDSAT data was obtained covering critical periods in the growth cycle. Data were analyzed by both photointerpretation and computer aided techniques. Image characteristics and spectral reflectance data were then related to forage production, range condition, range site, and changing growth conditions.

Carneggie, D. M.↗

N-15/N-14 variations in Cretaceous Atlantic sedimentary sequences - Implication for past changes in marine nitrogen biogeochemistry

Unusually low delta N-15 found in early to middle Cretaceous beds rich in marine organic matter from two separate eastern Atlantic Ocean basins is reported. These findings constitute unambiguous evidence that the N contained in these strata is the end result of biogeochemical processes that differed substantially from those that operated on the N contained in intervening organic carbon-poor strata and younger marine sediments. The data indicate that the low N-15 relative abundance is the consequence of pelagic rather than postdepositional processes. Reduced ocean circulation, increased denitrification, and hence, reduced euphotic zone nitrate availability may have led to Cretaceous phytoplankton assemblages that were periodically dominated by N2-fixing blue-green algae, a possible source of the sedimentary N-15 depletion.

Rau, Greg H.↗

Using the XMM-Newton Optical Monitor to Study Cluster Galaxy Evolution

We explore the application of XMM Newton Optical Monitor (XMM-OM) ultraviolet (UV) data to study galaxy evolution. Our sample is constructed as the intersection of all Abell clusters with z < 0.05 and having archival XMM-OM data in either the UVM2 or UVW1 filters, plus optical and UV photometry from the Sloan Digital Sky Survey and GALEX, respectively. The 11 resulting clusters include 726 galaxies with measured redshifts, 520 of which have redshifts placing them within their parent Abell clusters. We develop procedures for manipulating the XMM-OM images and measuring galaxy photometry from them, and we confirm our results via comparison with published catalogs. Color-magnitude diagrams (CMDs) constructed using the XMM-OM data along with SDSS optical data show promise for evolutionary studies, with good separation between red and blue sequences and real variation in the width of the red sequence that is likely indicative of differences in star formation history. This is particularly true for UVW1 data, as the relative abundance of data collected using this filter and its depth make it an attractive choice. Available tools that use stellar synthesis libraries to fit the UV and optical photometric data may also be used, thereby better describing star formation history within the past billion years and providing estimates of total stellar mass that include contributions from young stars. Finally, color-color diagrams that include XMM-OM UV data appear useful to the photometric identification of both extragalactic and stellar sources.

Miller, Neal A.↗

The evolution of transcriptional regulation in eukaryotes

Gene expression is central to the genotype-phenotype relationship in all organisms, and it is an important component of the genetic basis for evolutionary change in diverse aspects of phenotype. However, the evolution of transcriptional regulation remains understudied and poorly understood. Here we review the evolutionary dynamics of promoter, or cis-regulatory, sequences and the evolutionary mechanisms that shape them. Existing evidence indicates that populations harbor extensive genetic variation in promoter sequences, that a substantial fraction of this variation has consequences for both biochemical and organismal phenotype, and that some of this functional variation is sorted by selection. As with protein-coding sequences, rates and patterns of promoter sequence evolution differ considerably among loci and among clades for reasons that are not well understood. Studying the evolution of transcriptional regulation poses empirical and conceptual challenges beyond those typically encountered in analyses of coding sequence evolution: promoter organization is much less regular than that of coding sequences, and sequences required for the transcription of each locus reside at multiple other loci in the genome. Because of the strong context-dependence of transcriptional regulation, sequence inspection alone provides limited information about promoter function. Understanding the functional consequences of sequence differences among promoters generally requires biochemical and in vivo functional assays. Despite these challenges, important insights have already been gained into the evolution of transcriptional regulation, and the pace of discovery is accelerating.

Review, Academic↗

A direct time series comparison between the La Jolla and Belfast radiocarbon records

For many years it has been widely assumed that the variations in the level of atmospheric carbon-14 were due to statistical fluctuations arising from experimental error. This is understandable since the signal/noise ratio is very low and the time sequences representing the variations are strongly stochastic. Interlaboratory comparisons show that baseline variations in the absolute value of the carbon-14 concentration do exist. However, assuming linearity, the delta 14C values are independent of these. The importance of assessing the quantitive reality of the delta 14C values is based upon their expression of the interplanetary cosmic ray source function, because in the range of 100 to 1000 year periods, there appears to be no evidence that the Earth's magnetic field is the source modulating function. Therefore the modulation is either due to changes in the solar atmosphere propagated out into the solar wind, or extra-heliospheric pressure effects, but these appear to be unlikely for the periods noted here. The recent availability of the new high quality Belfast time sequence of delta 14C now permits a simple mutual assessment of the several sequences which are available. Since the La Jolla record has been a standard for many years , these two were chosen for a simple comparison. Although differences exist, the close agreement between these two sequences, one carried out on White mountain Bristlecone pines, and the other done using Irish peat bog wood, is striking. This correlation between the two strongly reinforces the statistical view that the delta 14C record is that of real interplanetary modulation of the cosmic ray source leading to the generation of atmospheric 14C.

Sonett, C. P.↗

A gamma ray monitor for the OSO-7 spacecraft

A 3 in. x 3 in. NaI(Tl) gamma ray (0.3 to 10 MeV) spectrometer with a CsI(Na) charged particle and anti-Compton shield has been developed for the Orbiting Solar Observatory (OSO-7) which was launched September 30, 1971. The instrument, designed for a rotating wheel compartment, utilizes a 377 channel quadratic PHA with accumulation times of 3, 1, or 0.5 minutes. Quick look and calibration data obtained via a direct data link to a minicomputer allows near real time monitoring and control of the experiment. Various commands changing the operating mode can be executed. The functions which can be commanded include: rotation of the quadrants in which data is collected by 90 deg; gain adjustment of the central detector over a 6:1 range; manual or automatic sequencing of calibrations; variations of accumulation times by telemetering selected channels; and selection of reference directions. A small X-ray detector covering the range 7.5 to 120 keV is also included.

Higbie, P. R.↗

Multispectral remote sensing as stratigraphic and structural tool, Wind River Basin and Big Horn Basin areas, Wyoming

The use of Landsat TM, Airborne Imaging Spectrometer, and airborne Thermal IR Multispectral Scanner data in the geological evaluation of two sites in central Wyoming is described and illustrated with diagrams, maps, photographs, sample images, and tables of numerical data. The value of the remotely sensed information on the areal variation of attitude, sequence, thickness, and lithology of exposed strata is demonstrated; details of the data analysis are given; and the specialized software packages employed are briefly characterized.

Lang, Harold R.↗

Substorms, plasmoids, flux robes, and magnetotail flux loss on March 25, 1983 - CDAW-8

During a 9-hour period following a storm-sudden commencement, six spacecraft near geosynchronous orbit, one over the pole, and three in the mgnetotail, monitored a complex sequence of magnetospheric variations. Magnetic field compressions associated with the sudden commencement were seen first by the near-earth spacecraft and subsequently by the three down-tail spacecraft with increasing time delays that were consistent with the tailward movement of an interplanetary-shock-associated pressure enhancement. Ground magnetograms and synchronous orbit data are used to identify 7 substorm intensifications during this geomagnetically active period. Six of these intensifications are clearly associated with tail lobe field decreases about 18 R sub E behind the earth. Four of these intensifications are followed by both Bz field increases in the tail lobes at about 18 and about 30 R sub E and by the subsequent observation of rapidly flowing plasma sheet plasma at ISEE 3 about 110 R sub E down the tail. During two substorms where DE 1 was optically observing the auroral oval, the area of the polar cap was observed to decrease as the tail lobe field decreased at 18 R sub E. All these observations are consistent with the substorm associated release of a plasmoid at a neutral line near 20 R sub E.

Fairfield, D. H.↗

Constant propellant use rendezvous scenario across a launch window for refueling missions

Active rendezvous of an unmanned spacecraft with the Space Transportation System (STS) Shuttle for refueling missions is investigated. The operational constraints facing both the maneuvering spacecraft and the Shuttle during a rendezvous sequence are presented. For example, the user spacecraft must arrive in the generic Shuttle control box at a specified time after Shuttle launch. In addition, the spacecraft must be able to initiate the transfer sequence from any point in its orbit. The standard four-burn rendezvous sequence, consisting of two Hohmann transfers and an intermediate phasing orbit, is presented as a low-energy solution for rendezvous and retrieval missions. However, for refueling missions, the Shuttle must completely refuel the spacecraft and return to Earth with no excess fuel. This additional constraint is not satisfied by the standard four-burn sequence. Therefore, a variation of the four-burn rendezvous, the constant delta-V scenario, was developed to satisfy the added requirement.

Hametz, M. E.↗

Gas-Dynamic Investigations of the Pulse-Jet Tube

Based upon a simplified representation of the mode of operation of the pulse-jet tube, the effect of the influences mentioned in the title were investigated and it will be shown that, for a jet tube with a fccmndesigned to be aerodynamically favorable, the ability to operate is at least questionable. By taking into account the course of the development of pressure by combustion, a new insight has been obtained into the processes of motion within the jet tube, an insight that explains a number of empirical observations, namely: certain particulars of the sequence of pressure variations; the existence of an optimum valve-opening ratio; the occurrence of an intrusion of air; and the existence of a flight speed above lrhichthe jet tube ceases to operate. At too great an opening ratio or at too great a flight s-peed, the continuous flow through the tube is too predominant over the oscilla~ory process to perinitthe occurrence of an explosion powerful enough to maintain continuous operation. Certain possible means of making the operation of the jet tube more independent of the flight speed and of reducing the flow losses were proposed and discussed.

Shultz-Grunow, F.↗

Optical Photometric Observations of GEO Debris

We report on a continuing program of optical photometric measurements of faint orbital debris at geosynchronous Earth orbit (GEO). These observations can be compared with laboratory studies of actual spacecraft materials in an effort to determine what the faint debris at GEO may be. We have optical observations from Cerro Tololo Inter-American Observatory (CTIO) in Chile of two samples of debris: 1. GEO objects discovered in a survey with the University of Michigan's 0.6-m aperture Curtis-Schmidt telescope MODEST (for Michigan Orbital DEbris Survey Telescope), and then followed up in real-time with the CTIO/SMARTS 0.9-m for orbits and photometry. Our goal is to determine 6 parameter orbits and measure colors for all objects fainter than R = 15 t11 magnitude that are discovered in the MODEST survey. 2. A smaller sample of high area to mass ratio (AMR) objects discovered independently, and acquired using predictions from orbits derived from independent tracking data collected days prior to the observations. Our optical observations in standard astronomical BVRI filters are done with either telescope, and with the telescope tracking the debris object at the object's angular rate. Observations in different filters are obtained sequentially. We have obtained 71 calibrated sequences of R-B-V-I-R magnitudes. A total of 66 of these sequences have 3 or more good measurements in all filters (not contaminated by star streaks or in Earth's shadow). Most of these sequences show brightness variations, but a small subset has observed brightness variations consistent with that expected from observational errors alone. The majority of these stable objects are redder than a solar color in both B-R and R-I. There is no dependence on color with brightness. For a smaller sample of objects we have observed with synchronized CCD cameras on the two telescopes. The CTIO 0.9-m observes in B, and MODEST in R. The CCD cameras are electronically linked together so that the start time and duration of observations are the same to better than 50 milliseconds. Thus, the B-R color is a true measure of the surface of the debris piece facing the telescopes for that observation. Any change in color reflects a real change in the debris surface. We will compare our observations with models and laboratory measurements of selected surfaces.

Seitzer, Patrick↗

Does Seed Sanitization Affect the Plant Rhizosphere Microbiome and Its Ability to Compete with the Human Associated Pathogen, E. coli on Salad Crops?

Cultivation of crops in controlled environmental agricultural systems may limit microbial colonization and reduce diversity of the microbial communities. Practices like seed and growth medium sanitization may further impact microbial communities in the mature plant and the plant’s capacity to limit the growth of pathogens through competition. As humans expand their travels to space, understanding plant growth, health, and development in closed environments will be critical to the success of producing a safe, supplemental food source for astronauts. To determine the persistence of a potential human pathogen in plant growth and development, sanitized and unsanitized seeds from, mizuna (Brassica rapa var japonica) and red romaine lettuce (Lactuca sativa cultivar ‘Outredgeous’), were inoculated with Escherichia coli, ATCC 21445, germinated under simulated International Space Station (ISS) environmental conditions and harvested every 7 days until maturity. The persistence of E. coli in the rhizosphere was determined by plating on selective media, real time PCR (Polymerase Chain Reaction) and community sequencing of the rhizosphere communities. E. coli was detected in the crops’ roots and leaves for several weeks post germination. At day 28, plants from sanitized seeds had significantly higher counts of E. coli on the roots than those from unsanitized seeds. E. coli was also detected on a few uninoculated plants indicating airborne cross contamination among plants in the same growth chamber and suggesting an influence of the natural microbiome on human pathogen survival and persistence in leafy greens. Sequencing analysis revealed variations in composition and diversity between the communities. Understanding the microbial community of the rhizospheric microbiome is only the first step in determining the relationships between plants. Additional studies to include genotypic and phenotypic variations in the plants should be considered to determine if the natural microbes in the rhizosphere may contribute to the health and therefore, safety of the edible plants.

Khodadad, Christina L. M.↗

Evaluation of Correction Methods for NASA GeneLab Transcriptomic Datasets

Conducting space biology experiments aboard the International Space Station, particularly those utilizing complex model organisms like mice, is expensive and difficult due to limited crew availability, hardware, and space. As a result, sample numbers from these studies are low, reducing the statistical power of any one experiment. Aggregating spaceflight datasets serves as a method to increase sample numbers, allowing for novel insights through bioinformatic analysis of ‘omics data from merged datasets. However, aggregating datasets can introduce unwanted variation including 1) differences in sample handling, processing, and sequencing platforms between datasets (technical variation) as well as 2) differences in experimental design between datasets such as sex or age of the model organism used. In the present study, NASA GeneLab-hosted RNAseq datasets from rodent liver tissues were used to evaluate several statistical methods to correct for this unwanted variation through two approaches, reference-based and standard. The following correction algorithms were applied with (reference-based) and/or without (standard) considering Universal Mouse RNA Reference samples: ComBat and ComBat_seq from the SVA package, median polish, empirical Bayes, and ANOVA-based algorithms from the MBatch package, and negative binomial regression normalization in the DESeq2 package. For each approach, after the correction algorithm was applied, differential gene expression (DGE) analysis of flight and ground control samples was performed with the combined data. The robustness of each tool was evaluated using BatchQC, to determine statistical differences between datasets before and after correction, Principal Component Analysis, to evaluate global gene expression in samples before and after correction, and by comparing DGE analysis of individual datasets and combined datasets before and after correction. The results showed that the reference-based approach introduced several additional (and likely artificial) DEGs when compared with the standard approach. Thus, the most robust standard correction will be implemented in the GeneLab Visualization 2.0 platform when datasets are combined.

GeneLab, RNA-seq, Batch Correction↗

Evaluation of Correction Methods for NASA GeneLab Transcriptomic Datasets

Conducting space biology experiments aboard the International Space Station, particularly those utilizing complex model organisms like mice, is expensive and difficult due to limited crew availability, hardware, and space. As a result, sample numbers from these studies are low, reducing the statistical power of any one experiment. Aggregating spaceflight datasets serves as a method to increase sample numbers, allowing for novel insights through bioinformatic analysis of ‘omics data from merged datasets. However, aggregating datasets can introduce unwanted variation including 1) differences in sample handling, processing, and sequencing platforms between datasets (technical variation) as well as 2) differences in experimental design between datasets. In the present study, NASA GeneLab-hosted RNAseq datasets from mouse liver tissues were used to evaluate several statistical methods to correct for this unwanted variation through two approaches, reference-based and standard. The following correction algorithms were applied with (reference-based) and/or without (standard) considering Universal Mouse RNA Reference samples: ComBat and ComBat_seq from the SVA package, median polish, empirical Bayes, and ANOVA-based algorithms from the MBatch package, and negative binomial regression normalization in the DESeq2 package. For each approach, after the correction algorithm was applied, differential gene expression (DGE) analysis of flight and ground control samples was performed with the combined data. The robustness of each tool was evaluated using BatchQC to determine statistical differences between datasets before and after correction, Principal Component Analysis to evaluate global gene expression in samples before and after correction, and by comparing DGE analysis of individual datasets and combined datasets before and after correction. The results showed that the reference-based approach introduced several additional (and likely artificial) DEGs when compared with the respective standard approach. Of the methods tested, standard ComBat and DESeq2 were identified as the most robust correction methods for combining spaceflight mouse liver RNAseq datasets hosted on GeneLab.

GeneLab↗

Combining RNA-SEQ Datasets from NASA GENELAB: An Evaluation of Correction Methods

Background: Conducting space biology experiments aboard the International Space Station, particularly those utilizing complex model organisms like mice, is expensive and difficult due to limited crew availability, hardware, and space. As a result, sample numbers from these studies are low, reducing the statistical power of any one experiment. Aggregating spaceflight datasets serves as a method to increase sample numbers, allowing for novel insights through bioinformatic analysis of ‘omics data from merged datasets. However, aggregating datasets can introduce unwanted variation including 1) differences in sample handling, processing, and sequencing platforms between datasets (technical variation) as well as 2) differences in experimental design between datasets. Methods: In the present study, NASA GeneLab-hosted RNAseq datasets from mouse liver tissues were used to evaluate several statistical methods to correct for this unwanted variation through two approaches, reference-based and standard. The following correction algorithms were applied with (reference-based) and/or without (standard) considering Universal Mouse RNA Reference samples: ComBat and ComBat_seq from the SVA package, the median polish, empirical Bayes, and ANOVA-based algorithms from the MBatch package, and negative binomial regression normalization in the DESeq2 package. For each approach, after the correction algorithm was applied, differential gene expression (DGE) analysis of flight and ground control samples was performed with the combined data. The robustness of each tool was evaluated using BatchQC to determine statistical differences between datasets before and after correction, Principal Component Analysis to evaluate global gene expression in samples before and after correction, and by comparing DGE analysis of individual datasets and combined datasets before and after correction. Results: The results showed that the reference-based approach introduced several additional (and likely artificial) differentially expressed genes when compared with the respective standard approach. Conclusions: Of the methods tested, standard ComBat_seq and DESeq2 were identified as the most robust correction methods for combining spaceflight mouse liver RNAseq datasets hosted on GeneLab.

Finsam Samson↗

Solar nebula dispersal and the stability of the planetary system. I - Scanning secular resonance theory

Secular resonances in the early solar system are investigated with the aim of establishing constraints on the time scale and method of solar nebula dispersal. Simplified nebula models and dispersal routines are used to approximate changes in an assumed axisymmetric nebula potential. These changes drive an evolutionary sequence of Laplace-Lagrange solutions for the secular variations of the solar system. These sequences are characterized by a sweep of one or more giant planet resonances through the inner solar system. Their effect is rate-dependent; characteristic dispersal times of not greater than 10,000 to 100,000 years are required to avoid the generation of terrestrial eccentricities and inclinations in excess of observed values.

Ward, W. R.↗

Molecular indicators for palaeoenvironmental change in a Messinian evaporitic sequence (Vena del Gesso, Italy). II: High-resolution variations in abundances and 13C contents of free and sulphur-bound carbon skeletons in a single marl bed

The extractable organic matter of 10 immature samples from a marl bed of one evaporitic cycle of the Vena del Gesso sediments (Gessoso-solfifera Fm., Messinian, Italy) was analyzed quantitatively for free hydrocarbons and organic sulphur compounds. Nickel boride was used as a desulphurizing agent to recover sulphur-bound lipids from the polar and asphaltene fractions. Carbon isotopic compositions (delta vs PDB) of free hydrocarbons and of S-bound hydrocarbons were also measured. Relationships between these carbon skeletons, precursor biolipids, and the organisms producing them could then be examined. Concentrations of S-bound lipids and free hydrocarbons and their delta values were plotted vs depth in the marl bed and the profiles were interpreted in terms of variations in source organisms, 13 C contents of the carbon source, and environmentally induced changes in isotopic fractionation. The overall range of delta values measured was 24.7%, from -11.6% for a component derived from green sulphur bacteria (Chlorobiaceae) to -36.3% for a lipid derived from purple sulphur bacteria (Chromatiaceae). Deconvolution of mixtures of components deriving from multiple sources (green and purple sulphur bacteria, coccolithophorids, microalgae and higher plants) was sometimes possible because both quantitative and isotopic data were available and because either the free or S-bound pool sometimes appeared to contain material from a single source. Several free n-alkanes and S-bound lipids appeared to be specific products of upper-water-column primary producers (i.e. algae and cyanobacteria). Others derived from anaerobic photoautotrophs and from heterotrophic protozoa (ciliates), which apparently fed partly on Chlorobiaceae. Four groups of n-alkanes produced by algae or cyanobacteria were also recognized based on systematic variations of abundance and isotopic composition with depth. For hydrocarbons probably derived from microalgae, isotopic variations are well correlated with those of total organic carbon. A resistant aliphatic biomacromolecule produced by microalgae is, therefore, probably an important component of the kerogen. These variations reflect changes in the depositional environment and early diagenetic transformations. Changes in the concentrations of S-bound lipids induced by variations in conditions favourable for sulphurization were discriminated from those related to variations in primary producer assemblages. The water column of the lagoonal basin was stratified and photic zone anoxia occurred during the early and middle stages of marl deposition. During the last stage of the marl deposition the stratification collapsed due to a significant shallowing of the water column. Contributions from anaerobic photoautotrophs were apparently associated with variations in depth of the chemocline.

Non-NASA Center↗