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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 397 records · Page 22
All sourcesNASA NTRSDOE OSTI
DOE OSTI2026

The ENDF/B Nuclear Data Library and Its Impact on Reactor Simulations

The ENDF/B library, which is developed, maintained, and distributed by the Cross Section Evaluation Working Group, is the main source of nuclear data for analyses and computational simulations in nuclear applications, like different nuclear reactors concepts, radiation shielding, medical applications, astrophysics, etc. The library is constantly being improved and updated, with each release bringing an optimal representation of nuclear interactions as they are understood in their time. The most recent release, ENDF/B-VIII.1, represents a significant improvement in terms of the performance and consistency of the measured differential data relative to previous versions, as it combines the most recent experimental differential data and advanced theoretical nuclear models. As one of the many highlights, ENDF/B-VIII.1 restores a high-burnup depletion performance, comparable to ENDF/B-VII.1, that had been degraded in ENDF/B-VIII.0, while further improving the performance in criticality benchmarks, such as those in the Mosteller’s suite. Additionally noteworthy is the improved performance of ENDF/B-VIII.1 in radiation shielding and thick-target leakage spectrum integral experiments, which are also important for fusion and reactor applications. In this work we present in a very summarized way the main updates implemented in the ENDF/B-VIII.1 release and its main impacts, and also begin to delineate the path forward as to what to expect in the future for the next ENDF/B release, which, based on the timeline of the past few releases, is estimated to happen around 5 years from now. We emphasize that the ENDF/B-VIII.1 release was the product of an enormous collaborative effort among many authors and that for a complete detailed picture, the reader is strongly encouraged to refer to the article accompanying the release, which is currently in the publication process, but available as preprint [G. P. A. Nobre et al. arXiv Preprint arXiv: 2511.03564 (2025)].

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2026

Cooperative Automated Cohort Driving on Connected Infrastructure, Arterial Roadways, and Highways: Final Project Demonstration and System-of-Systems Model Correlation

This project seeks to synergize vehicle automated driving and connectivity data to improve mobility and energy efficiency of groups of mixed vehicles operating in close proximity (vehicle cohort) on various infrastructure. A custom cellular communication network links vehicles operating as a cohort with infrastructure to a centralized system-of-systems digital twin with an AI-based optimal behavior planner. The data contained in this set are from final testing and technology demonstrations to U.S. Department of Energy staff at the American Center for Mobility. The data contain single-lane, single-light scenarios; multi-lane, multi-light arterial scenarios; and limited-access highway scenarios. All test cases were derived from simulations and replicated on the test track. The project employed two and four light-duty vehicles with connectivity and drive automation for the testing. The baseline scenario without connectivity was run under the control of the system-of-systems centralized planner but operating each vehicle with an intelligent driver model controlling the velocity, lane utilization, and vehicle gap. This was to ensure the highest compatibility with the simulation in terms of dynamic behavior. The connected cohort case utilized AI optimization to perform coordinated and cooperative control for energy, as well as safe, comfortable behavior for the cohort. The dataset is appropriately named with unconnected and connected designations, with comparisons sharing the same run index number. The included PowerPoint and PDF files describe the test setup and provide an overview of results from the project. ![image](de-EE0009209_March_2023_Data_Arterial_Scenario_Results.png)

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗
NASA NTRS2017

Understanding the International Space Station Crew Perspective following Long-Duration Missions through Data Analytics & Visualization of Crew Feedback

The International Space Station (ISS) first became a home and research laboratory for NASA and International Partner crewmembers over 16 years ago. Each ISS mission lasts approximately 6 months and consists of three to six crewmembers. After returning to Earth, most crewmembers participate in an extensive series of 30+ debriefs intended to further understand life onboard ISS and allow crews to reflect on their experiences. Examples of debrief data collected include ISS crew feedback about sleep, dining, payload science, scheduling and time planning, health & safety, and maintenance. The Flight Crew Integration (FCI) Operational Habitability (OpsHab) team, based at Johnson Space Center (JSC), is a small group of Human Factors engineers and one stenographer that has worked collaboratively with the NASA Astronaut office and ISS Program to collect, maintain, disseminate and analyze this data. The database provides an exceptional and unique resource for understanding the "crew perspective" on long duration space missions. Data is formatted and categorized to allow for ease of search, reporting, and ultimately trending, in order to understand lessons learned, recurring issues and efficiencies gained over time. Recently, the FCI OpsHab team began collaborating with the NASA JSC Knowledge Management team to provide analytical analysis and visualization of these over 75,000 crew comments in order to better ascertain the crew's perspective on long duration spaceflight and gain insight on changes over time. In this initial phase of study, a text mining framework was used to cluster similar comments and develop measures of similarity useful for identifying relevant topics affecting crew health or performance, locating similar comments when a particular issue or item of operational interest is identified, and providing search capabilities to identify information pertinent to future spaceflight systems and processes for things like procedure development and training. In addition, the comments were scored for sentiment using a polarity scoring algorithm to identify both positive and negative comments for particular groups and clusters, allowing the team to make analytically informed decisions regarding future hardware and operating procedures. The use of polarity scoring with time series analysis was used to provide insight into how crew health and habitability is changing throughout various spaceflight increments or the station lifecycle as a whole. Finally, a visualization framework was developed to address the needs of the end users to search for and analyze comments by user, category or mission. This paper will discuss how the use of an analytical framework in conjunction with the current human interface, improved the understanding of crew perspective and shortened the time for analysis allowing for more informed decisions and rapid development of improvements. These methods are significantly optimizing the way that this valuable data can be assessed and applied to current and future spaceflight design and development. This collaboration allows the FCI OpsHab team to effectively analyze and share data in a more automated and timely fashion. Trends are no longer derived manually and can be illustrated effectively and accurately with these evolving techniques to an ever growing group of human spaceflight end users.

Bryant, Cody↗
NASA NTRS1984

Electromechanical/electromagnetics working group summary

The component and system technology issues associated with suspension and power conversion systems for the flywheel were discussed. The development of the technology consists of three major steps and encompasses a complementary mix of analytical efforts and hardware development for validation of design approaches and concept implementations. The major elements included: (1) studies to determine the optimal system configuration considering gimballed and nongimballed wheel concepts and incorporating the best 1984 component technology. These studies must also address the impact of rotor configuration on other elements of the system such as motor/generators and magnetic suspension systems to permit the selection of the optimal configuration for the demonstration phase; (2) focus the development program on integration and demonstration of a complete system which includes the rotor, suspension, and power conversion subsystems which emphasis efficiency; (3) conduct a technology program on motor/generators, suspension systems, gimbals, and sensors to take advantage of known technological advances.

Eisenhaure, D. B.↗
NASA NTRS2023

The optimization of model ensemble composition and size can enhance the robustness of crop yield projections

Linked climate and crop simulation models are widely used to assess the impact of climate change on agriculture. However, it is unclear how ensemble configurations (model composition and size) influence crop yield projections and uncertainty. Here, we investigate the influences of ensemble configurations on crop yield projections and modeling uncertainty from Global Gridded Crop Models and Global Climate Models under future climate change. We performed a cluster analysis to identify distinct groups of ensemble members based on their projected outcomes, revealing unique patterns in crop yield projections and corresponding uncertainty levels, particularly for wheat and soybean. Furthermore, our findings suggest that approximately six Global Gridded Crop Models and 10 Global Climate Models are sufficient to capture modeling uncertainty, while a cluster-based selection of 3-4 Global Gridded Crop Models effectively represents the full ensemble. The contribution of individual Global Gridded Crop Models to overall uncertainty varies depending on region and crop type, emphasizing the importance of considering the impact of specific models when selecting models for local-scale applications. Our results emphasize the importance of model composition and ensemble size in identifying the primary sources of uncertainty in crop yield projections, offering valuable guidance for optimizing ensemble configurations in climate-crop modeling studies tailored to specific applications.

Agriculture↗
DOE OSTI2026

Human Factors and Technologies Design to Improve User Acceptance of Pooled Rideshare for Increasing Transportation System Energy Efficiency

This multi-year project delivered a comprehensive, human-factors-driven framework to understand, model, and improve pooled rideshare (PR) adoption in the United States. Through three large-scale national survey studies involving more than 16,000 participants across multiple cities and demographic groups, the research established one of the most extensive datasets to date on user perceptions, behavioral barriers, and service expectations related to pooled rideshare. These data revealed key human factors barriers of user acceptance of PR and suggested potential actionable experience optimizations that could lead to increased PR usage. This foundational knowledge guided the development of novel human-factors models and behavioral choice models that quantify how psychological, demographic, and trip-level factors influence willingness to pool. Building on these empirical insights, the project developed advanced behavioral modeling tools, including mixed logit and integrated choice and latent variable models, to capture both observable and latent influences on PR adoption. These models significantly improved the ability to predict riders’ acceptance of pooled trips, explaining choice heterogeneity through latent constructs such as safety, service experience, privacy concerns, time sensitivity, and environmental attitudes. Together, these models provide a robust analytical foundation for designing PR systems that more effectively meet user needs. The project translated human-factors insights and behavioral models into actionable technology innovations by extending POLARIS—an agent-based, activity-based travel simulation platform—into a fully functional pooled rideshare simulation environment. New PR modules, acceptance models, and regional scenarios were implemented for Greenville, SC and Austin, TX, enabling high-fidelity validation of algorithmic strategies under realistic demand and traffic conditions. The simulation platform supported the development and evaluation of adaptive discount-based assignment algorithms, enhanced willingness-to-pay formulations, demographic-aware incentive mechanisms, and a proactive joint assignment and repositioning strategy. Simulation results demonstrated substantial gains in pooling uptake, average vehicle occupancy, energy efficiency, and fleet profitability. In Greenville, pooling adoption more than doubled, while reductions in vehicle-miles traveled and energy consumption were significant. In Austin, pooling improvements were achieved with minimal service-quality trade-offs, and profitability increased across all fleet sizes. Through this research, we developed a comprehensive understanding of the human factors barriers that limit user acceptance of pooled rideshare services. These insights enabled the design of human-factors-aware pooled rideshare technologies that more effectively address user concerns and improve adoption rates. By integrating these models into an advanced agent-based simulation framework, we demonstrated that higher adoption of pooled rideshare can lead to measurable improvements in energy efficiency and system performance. Together, these contributions establish a validated pathway from human-centered analysis to technology development and energy-saving outcomes, supporting national goals for more sustainable and efficient mobility systems.

Jia, Yunyi↗
DOE OSTI2024

De Novo Design of Spiro-Type Hole-Transporting Material: Anisotropic Regulation Toward Efficient and Stable Perovskite Solar Cells

2,2',7,7'-Tetrakis(N,N-di-p-methoxyphenyl)-amine-9,9'-spirobifluorene (Spiro-OMeTAD) represents the state-of-the-art hole-transporting material (HTM) in n-i-p perovskite solar cells (PSCs). However, its susceptibility to stability issues has been a long-standing concern. In this study, we embark on a comprehensive exploration of the untapped potential within the family of spiro-type HTMs using an innovative anisotropic regulation strategy. Diverging from conventional approaches that can only modify spirobifluorene with single functional group, this approach allows us to independently tailor the two orthogonal components of the spiro-skeleton at the molecular level. The newly designed HTM, SF-MPA-MCz, features enhanced thermal stability, precise energy level alignment, superior film morphology, and optimized interfacial properties when compared to Spiro-OMeTAD, which contribute to a remarkable power conversion efficiency (PCE) of 24.53% for PSCs employing SF-MPA-MCz with substantially improved thermal stability and operational stability. Note that the optimal concentration for SF-MPA-MCz solution is only 30 mg/ml, significantly lower than Spiro-OMeTAD (>70 mg/ml), which could remarkably reduce the cost especially for large-area processing in future commercialization. This work presents a promising avenue for the versatile design of multifunctional HTMs, offering a blueprint for achieving efficient and stable PSCs.

14 SOLAR ENERGY↗
NASA NTRS1991

An Exploratory Exercise in Taguchi Analysis of Design Parameters: Application to a Shuttle-to-space Station Automated Approach Control System

The chief goals of the summer project have been twofold - first, for my host group and myself to learn as much of the working details of Taguchi analysis as possible in the time allotted, and, secondly, to apply the methodology to a design problem with the intention of establishing a preliminary set of near-optimal (in the sense of producing a desired response) design parameter values from among a large number of candidate factor combinations. The selected problem is concerned with determining design factor settings for an automated approach program which is to have the capability of guiding the Shuttle into the docking port of the Space Station under controlled conditions so as to meet and/or optimize certain target criteria. The candidate design parameters under study were glide path (i.e., approach) angle, path intercept and approach gains, and minimum impulse bit mode (a parameter which defines how Shuttle jets shall be fired). Several performance criteria were of concern: terminal relative velocity at the instant the two spacecraft are mated; docking offset; number of Shuttle jet firings in certain specified directions (of interest due to possible plume impingement on the Station's solar arrays), and total RCS (a measure of the energy expended in performing the approach/docking maneuver). In the material discussed here, we have focused on single performance criteria - total RCS. An analysis of the possibility of employing a multiobjective function composed of a weighted sum of the various individual criteria has been undertaken, but is, at this writing, incomplete. Results from the Taguchi statistical analysis indicate that only three of the original four posited factors are significant in affecting RCS response. A comparison of model simulation output (via Monte Carlo) with predictions based on estimated factor effects inferred through the Taguchi experiment array data suggested acceptable or close agreement between the two except at the predicted optimum point, where a difference outside a rule-of-thumb bound was observed. We have concluded that there is most likely an interaction effect not provided for in the original orthogonal array selected as the basis for our experimental design. However, we feel that the data indicates that this interaction is a mild one and that inclusion of its effect will not alter the location of the optimum.

Deal, Don E.↗
NASA NTRS1997

A Parallel Pipelined Renderer for the Time-Varying Volume Data

This paper presents a strategy for efficiently rendering time-varying volume data sets on a distributed-memory parallel computer. Time-varying volume data take large storage space and visualizing them requires reading large files continuously or periodically throughout the course of the visualization process. Instead of using all the processors to collectively render one volume at a time, a pipelined rendering process is formed by partitioning processors into groups to render multiple volumes concurrently. In this way, the overall rendering time may be greatly reduced because the pipelined rendering tasks are overlapped with the I/O required to load each volume into a group of processors; moreover, parallelization overhead may be reduced as a result of partitioning the processors. We modify an existing parallel volume renderer to exploit various levels of rendering parallelism and to study how the partitioning of processors may lead to optimal rendering performance. Two factors which are important to the overall execution time are re-source utilization efficiency and pipeline startup latency. The optimal partitioning configuration is the one that balances these two factors. Tests on Intel Paragon computers show that in general optimal partitionings do exist for a given rendering task and result in 40-50% saving in overall rendering time.

Chiueh, Tzi-Cker↗
NASA NTRS2004

Simulation of Aerosols and Chemistry with a Unified Global Model

This project is to continue the development of the global simulation capabilities of tropospheric and stratospheric chemistry and aerosols in a unified global model. This is a part of our overall investigation of aerosol-chemistry-climate interaction. In the past year, we have enabled the tropospheric chemistry simulations based on the GEOS-CHEM model, and added stratospheric chemical reactions into the GEOS-CHEM such that a globally unified troposphere-stratosphere chemistry and transport can be simulated consistently without any simplifications. The tropospheric chemical mechanism in the GEOS-CHEM includes 80 species and 150 reactions. 24 tracers are transported, including O3, NOx, total nitrogen (NOy), H2O2, CO, and several types of hydrocarbon. The chemical solver used in the GEOS-CHEM model is a highly accurate sparse-matrix vectorized Gear solver (SMVGEAR). The stratospheric chemical mechanism includes an additional approximately 100 reactions and photolysis processes. Because of the large number of total chemical reactions and photolysis processes and very different photochemical regimes involved in the unified simulation, the model demands significant computer resources that are currently not practical. Therefore, several improvements will be taken, such as massive parallelization, code optimization, or selecting a faster solver. We have also continued aerosol simulation (including sulfate, dust, black carbon, organic carbon, and sea-salt) in the global model to cover most of year 2002. These results have been made available to many groups worldwide and accessible from the website http://code916.gsfc.nasa.gov/People/Chin/aot.html.

Chin, Mian↗
NASA NTRS2015

NASA's Rodent Research Project: Validation of Capabilities for Conducting Long Duration Experiments in Space

Research using rodents is an essential tool for advancing biomedical research on Earth and in space. Prior rodent experiments on the Shuttle were limited by the short flight duration. The International Space Station (ISS) provides a new platform for conducting rodent experiments under long duration conditions. Rodent Research (RR)-1 was conducted to validate flight hardware, operations, and science capabilities that were developed at the NASA Ames Research Center. Twenty C57BL6J adult female mice were launched on Sept 21, 2014 in a Dragon Capsule (SpaceX-4), then transferred to the ISS for a total time of 21-22 days (10 commercial mice) or 37 days (10 validation mice). Tissues collected on-orbit were either rapidly frozen or preserved in RNAlater at -80C (n2group) until their return to Earth. Remaining carcasses on-orbit were rapidly frozen for dissection post-flight. The three controls groups at Kennedy Space Center consisted of: Basal mice euthanized at the time of launch, Vivarium controls housed in standard cages, and Ground Controls (GC) housed in flight hardware within an environmental chamber. Upon return to Earth, there were no differences in body weights between Flight (FLT) and GC at the end of the 37 days in space. Liver enzyme activity levels of FLT mice and all control mice were similar in magnitude to those of the samples that were processed under optimal conditions in the laboratory. Liver samples dissected on-orbit yielded high quality RNA (RIN8.99+-0.59, n7). Liver samples dissected post-flight from the intact, frozen FLT carcasses yielded RIN of 7.27 +- 0.52 (n6). Additionally, wet weights of various tissues were measured. Adrenal glands and spleen showed no significant differences in FLT compared to GC although thymus and livers weights were significantly greater in FLT compared to GC. Over 3,000 tissue aliquots collected post-flight from the four groups of mice were deposited into the Ames Life Science Data Archives for future Biospecimen Sharing Program. Together, the RR validation flight successfully demonstrates the capability to support long-duration experimentation on the ISS to achieve both basic science and biomedical objectives.

spaceflight↗
DOE OSTI2026

Engineering acid-base active sites on an N-doped biochar catalyst for microwave-assisted biodiesel production from waste cooking oil

Acid-base bifunctional catalysts play a crucial role in converting high-free fatty acid (FFA) feedstocks into biodiesel by enabling the simultaneous esterification and transesterification of triglycerides in a single step, thereby minimizing saponification and streamlining the process. In this study, we report the design and development of a novel N-doped acid-base bifunctional biochar catalyst synthesized from renewable biomass precursors- glucose and chitosan. The catalyst’s acidic sites were introduced via surface functionalization with o-sulfobenzoic acid cyclic anhydride, grafting -SO₃H groups onto the carbon framework, while basic sites were generated from amine functionalities (-NH) derived from chitosan, yielding a robust and truly bifunctional surface. The catalyst was characterized and used for the microwave-assisted transesterification of waste cooking oil, and process optimization using response surface methodology (RSM-CCD) yielding a maximum biodiesel yield of 98.8 ± 0.4% under optimal conditions (methanol-to-oil molar ratio 20:1, catalyst loading 5.7 wt%, temperature 99 °C, and reaction time 46.6 min). The catalyst demonstrated good stability, maintaining a yield of 92.2 ± 0.4% after eight reuse cycles. A Life Cycle Assessment (LCA) conducted for 1 kg of biodiesel production revealed a global warming potential of 0.85 kg CO 2 eq and human toxicity potential of 1.59 kg 1,4-DB eq, with the largest environmental contributions arising from catalyst preparation and reuse. In conclusion, this work highlights a green and circular approach to biodiesel production, combining renewable catalyst design, waste feedstock utilization, and quantitative sustainability assessment to guide future developments in sustainable catalysis and biofuel engineering.

Bifunctional catalyst↗
DOE OSTI2026

Novel Organosulfur-Based Electrolytes for Safe Operation of High Voltage Li-ion Batteries over a Wide Operating Temperature

This project addresses the failure of conventional electrolytes and enables high-voltage operation of lithium-ion batteries (LIBs) by developing a novel organosulfur-based electrolyte system. To achieve this goal, we first designed and synthesized new organosulfur solvents that functionalized with strong electron-withdrawing groups such as fluoroalkyl and cyano substituents. Through regio-specific molecular engineering, supported by theoretical calculations, we lowered the highest occupied molecular orbital (HOMO) energy levels of these molecules to increase their anodic stability for high-voltage operation. We then optimized the formulation of the organosulfur-based electrolyte with additives, co-solvents and salts tailored to the newly synthesized solvent molecules. In parallel, we utilized advanced spectroscopic techniques—including in situ FTIR, EIS, and DEMS—to thoroughly elucidate the mechanisms of interaction between the electrolyte and electrode materials. Finally, we evaluated 2 Ah pouch cells under both normal and extreme conditions. Pouch cells with the newly developed electrolyte system demonstrated >90% capacity retention after 500 cycles under 4.5 V operating voltage, >80% capacity retention after 1000 cycles in coin cell level. In addition, the cells exhibited high safety and reliable operation capability over a wide temperature range from −30 °C to +45 °C.

25 ENERGY STORAGE↗
DOE OSTI2026

Fluorinated Glyme Solvents to Extend Lithium-Sulfur Battery Life (Final Technical Report, Unlimited)

This project investigated a number of partially fluorinated glymes (PFGs) as electrolyte cosolvents to improve the performance of lithium-sulfur (Li-S) batteries. A major issue in Li-S cells is the electrochemical reaction of sulfur in the cathode to form lithium polysulfides (LPS) that dissolve in the electrolyte. Those LPS are electrochemically and chemically reactive at the lithium anode, resulting in lithium sulfide deposition on the anode and also electrochemical reaction at both the anode and cathode, leading to a “polysulfide shuttle” and reduced coulombic efficiency (CE) and self-discharge of the cell. PFGs reduce the solubility of LPS while maintaining good solubility of lithium salts such as LiTFSI. By adjusting the amount of PFG as cosolvent in the electrolyte, we showed that the solubility of LPS in the electrolyte can be tuned. (It is not desirable to completely eliminate LPS in the electrolyte, as they facilitate electrochemical reaction of the electrically insulating S 8 and Li 2 S within the cathode by shuttling charge between them and the conductive carbon.) Another issue in Li-S cells is degradation of the Li anode over many cycles of stripping (discharge) and plating (charge). We showed that PFGs have a beneficial effect on the physical morphology of the Li anode, SEI formation, and the CE of a Li-Li cell. Among the many PFGs tested, we found the best performance from PFGs designated PFG2 and PFG5, and these two PFGs were thoroughly studied. A systematic coin-cell study of electrolyte solvents of 90:10, 80:20, or 70:30 DME:PFG (DME = 1,2-dimethoxyethane) revealed some systematic trends: a higher percentage of PFG solvent led to substantially longer cycle life, but at the same time reduced specific capacity (mAh/g(S)) and cell capacity at higher rates. These studies used LiFSI as the electrolyte salt, as it was found to extend cycle life compared to LiTFSI. Finally, the addition of a small amount of 1,3-dioxolane (DOL) to the electrolyte was found to be beneficial. The overall optimal electrolyte solution was found to be 0.6 M LiFSI + 0.5 M LiNO 3 in 75:5:20 DME/DOL/PFG (either PFG2 or PFG5).

25 ENERGY STORAGE↗
NASA NTRS1984

Hot melt adhesive pad surface attachment assembly concept for on-orbit operations

The use of a hot melt adhesive concept to develop a Surface Attachment Assembly (SAA) for on-orbit attachment and detachment operations for the Manned Maneuvering Unit (MMU) was investigated. The concept involved impregnation of the hot melt adhesive into a fiberglass covered pad which contained electrical heating and thermoelectric cooling devices. The polyamide hot melt adhesive selected can be repeatedly heated to its melting point in a vacuum and provide good adhesion to various surfaces, i.e., reusable surface insulation tiles, metals, and composites, when cooled. After a series of adhesive screening tests, Jet-Melt 3746 was selected from a group of commercially available thermoplastic adhesive candidates which met or exceeded many of the criteria established for the SAA system. The SAA system was designed and fabricted with the goal of proving the concept with a working model rather than attempting to optimize all facets of the system. This system evolved by investigating alternate attachment concepts, designing and fabricating electronic systems to heat and cool the adhesive, and then fabricating electronic systems to heat and cool the adhesive, and then fabricating and testing two prototype full-size units.

Progar, D. J.↗
NASA NTRS1987

Concurrent and vectorized mixed time, explicit nonlinear structural dynamics algorithms

A nonlinear structural dynamics program with an element library that exploits parallel processing is described. The aim is to exploit scheduling-allocation so that parallel processing and vectorization can effectively be treated in a general purpose program with explicit time integration and different time steps in different parts of the mesh. The program uses an element group scheme, which, as a by-product, also provides an automatic scheme for assigning different time steps to different parts of the mesh. The program has been tested on the Alliant FX/8; it shows a fivefold improvement in speed over compiler optimization.

Belytschko, Ted↗
NASA NTRS2003

Genomic clocks and evolutionary timescales

For decades, molecular clocks have helped to illuminate the evolutionary timescale of life, but now genomic data pose a challenge for time estimation methods. It is unclear how to integrate data from many genes, each potentially evolving under a different model of substitution and at a different rate. Current methods can be grouped by the way the data are handled (genes considered separately or combined into a 'supergene') and the way gene-specific rate models are applied (global versus local clock). There are advantages and disadvantages to each of these approaches, and the optimal method has not yet emerged. Fortunately, time estimates inferred using many genes or proteins have greater precision and appear to be robust to different approaches.

Evolution, Molecular↗
NASA NTRS2006

Bacterial Composition and Quantitation in the Yungay Region of the Atacama Desert, Chile

Voyager would have produced similar negative results if tested in the Yungay region (Navarro-Gonzales et al, 2003). However, the number of bacteria present per gr'am in the Yungay sands is not well-established, being below the detection limit of culture methods. For the past several years, this group has been analyzing Yungay sands by quantitative Polymerase Chain Reaction (qPCR), both in the lab and in the field, to establish protocols for counting bacteria. We use primers that detect a broad range of bacterial taxa, including both proteobacteria and firmicutes. Optimization of DNA extraction and qPCR analysis is critical for accurate counts. Comparison of qPCR results with PhosphoLipid Fatty Acid (PLFA)-analysis and other counting methods indicates that there are detectable bacteria in sand obtained from the upper few centimeters of the desert surface.

Fletcher, Lauren↗