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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 55 records · Page 3
All sourcesNASA NTRSDOE OSTI
DOE OSTI2024

Molecular architecture and functional dynamics of the pre-incision complex in nucleotide excision repair

Nucleotide excision repair (NER) is vital for genome integrity. Yet, our understanding of the complex NER protein machinery remains incomplete. Combining cryo-EM and XL-MS data with AlphaFold2 predictions, we build an integrative model of the NER pre-incision complex(PInC). Here TFIIH serves as a molecular ruler, defining the DNA bubble size and precisely positioning the XPG and XPF nucleases for incision. Using simulations and graph theoretical analyses, we unveil PInC’s assembly, global motions, and partitioning into dynamic communities. Remarkably, XPG caps XPD’s DNA-binding groove and bridges both junctions of the DNA bubble, suggesting a novel coordination mechanism of PInC’s dual incision. XPA rigging interlaces XPF/ERCC1 with RPA, XPD, XPB, and 5' ssDNA, exposing XPA’s crucial role in licensing the XPF/ERCC1 incision. Mapping disease mutations onto our models reveals clustering into distinct mechanistic classes, elucidating xeroderma pigmentosum and Cockayne syndrome disease etiology.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2025

Unlocking expanded flagellin perception through rational receptor engineering

Abstract The surface-localized receptor kinase FLS2 detects the flg22 epitope from bacterial flagella. FLS2 is conserved across land plants, but bacterial pathogens exhibit polymorphic flg22 epitopes. Most FLS2 homologues possess narrow perception ranges, but four with expanded perception have been identified. Using diversity analyses, AlphaFold modelling and amino acid properties, key residues enabling expanded recognition were mapped to FLS2’s concave surface, interacting with the co-receptor and polymorphic flg22 residues. Synthetic biology enabled engineering of expanded recognition from QvFLS2 (Quercus variabilis) into a homologue with canonical perception. A similar approach enabled transfer ofAgrobacteriumperception from FLS2 XL (Vitis riparia) into VrFLS2. Evolutionary analyses across three plant orders showed residues under positive selection aligning with those binding the co-receptor and flg22’s C terminus, suggesting more alleles with expanded perception exist. Our experimental data enabled the identification of specific receptor amino acid properties and AlphaFold3 metrics that facilitate predicting FLS2–flg22 recognition. This study provides a framework for rational receptor engineering to enhance pathogen restriction.

Plant Sciences↗
DOE OSTI2024

X-ray linear dichroic tomography of crystallographic and topological defects

Abstract The functionality of materials is determined by their composition 1–4 and microstructure, that is, the distribution and orientation of crystalline grains, grain boundaries and the defects within them 5,6 . Until now, characterization techniques that map the distribution of grains, their orientation and the presence of defects have been limited to surface investigations, to spatial resolutions of a few hundred nanometres or to systems of thickness around 100 nm, thus requiring destructive sample preparation for measurements and preventing the study of system-representative volumes or the investigation of materials under operational conditions 7–15 . Here we present X-ray linear dichroic orientation tomography (XL-DOT), a quantitative, non-invasive technique that allows for an intragranular and intergranular characterization of extended polycrystalline and non-crystalline 16 materials in three dimensions. We present the detailed characterization of a polycrystalline sample of vanadium pentoxide (V 2 O 5 ), a key catalyst in the production of sulfuric acid 17 . We determine the nanoscale composition, microstructure and crystal orientation throughout the polycrystalline sample with 73 nm spatial resolution. We identify and characterize grains, as well as twist, tilt and twin grain boundaries. We further observe the creation and annihilation of topological defects promoted by the presence of volume crystallographic defects. The non-destructive and spectroscopic nature of our method opens the door to operando combined chemical and microstructural investigations 11,18 of functional materials, including energy, mechanical and quantum materials.

Science & Technology - Other Topics↗
DOE OSTI2021

White Rabbit Time Synchronization for Radiation Detector Readout Electronics

As radiation detector arrays in nuclear physics applications become larger and physically more separated, the time synchronization and trigger distribution between many channels of detector readout electronics become more challenging. Clocks and triggers are traditionally distributed through dedicated cabling, but newer methods such as the IEEE 1588 Precision Time Protocol and White Rabbit allow clock synchronization through the exchange of timing messages over Ethernet. Consequently, we report here the use of White Rabbit in a new detector readout module, the Pixie-Net XL. Herein, the White Rabbit core, data capture from multiple digitizing channels, and subsequent pulse processing for pulse height and constant fraction timing are implemented in a Kintex 7 FPGA. The detector data records include White Rabbit time stamps and are transmitted to storage through the White Rabbit core's gigabit Ethernet data path or a slower diagnostic/control link using an embedded Zynq processor. The performance is characterized by time-of-flight style measurements and by time correlation of high energy background events from cosmic showers in detectors separated by longer distances. Software for the Zynq processor can implement "software triggering", for example to limit recording of data to events where a minimum number of channels from multiple modules detect radiation at the same time.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2020

Inhibition of USP7 activity selectively eliminates senescent cells in part via restoration of p53 activity

The accumulation of senescent cells (SnCs) is a causal factor of various age-related diseases as well as some of the side effects of chemotherapy. Pharmacological elimination of SnCs (senolysis) has the potential to be developed into novel therapeutic strategies to treat these diseases and pathological conditions. Here we show that ubiquitin-specific peptidase 7 (USP7) is a novel target for senolysis because inhibition of USP7 with an inhibitor or genetic depletion of USP7 by RNA interference induces apoptosis selectively in SnCs. The senolytic activity of USP7 inhibitors is likely attributable in part to the promotion of the human homolog of mouse double minute 2 (MDM2) ubiquitination and degradation by the ubiquitin–proteasome system. This degradation increases the levels of p53, which in turn induces the pro-apoptotic proteins PUMA, NOXA, and FAS and inhibits the interaction of BCL-XL and BAK to selectively induce apoptosis in SnCs. Further, we show that treatment with a USP7 inhibitor can effectively eliminate SnCs and suppress the senescence-associated secretory phenotype (SASP) induced by doxorubicin in mice. These findings suggest that small molecule USP7 inhibitors are novel senolytics that can be exploited to reduce chemotherapy-induced toxicities and treat age-related diseases.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

An Introduction to Word Embeddings and Language Models

Language models have advanced at a phenomenal pace over the past decade. This document provides a short introduction to terminology, word embeddings (aka low-dimensional representations), and popular large-scale language models (LMs). Word embeddings are used to represent words as numerical vectors and are context-independent, meaning a word can only have a single representation (e.g., club can only be club sandwich, not golf club ). Language models can determine the probability of a given sequence of words occurring in a sentence and can provide context to distinguish between words and phrases that sound similar. LMs are context-dependent (e.g., club can be club sandwich or golf club ) and largely fall in two main classes – autoregressive and autoencoding models. Autoregressive models are pretrained on the classic language modeling task: guess the next token having read all the previous ones. Those models can be fine-tuned and achieve great results on many tasks, the most natural application is text generation. A typical example of such models is GPT, but others include GPT-2, GPT-3, CTLR, TRANSFORMER-XL, REFORMER, XLNET. Autoencoding models are pretrained by corrupting the input tokens in some way and trying to reconstruct the original sentence. They can be fine-tuned and achieve great results on many tasks such as text generation, but their most natural application is sentence classification or token classification. A typical example of such models is BERT, but others include ROBERTA, ALBERT, XML, XML-ROBERTA, FLAUBERT AND LONGFORMER.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2021

Specification Document for OC6 Phase II: Verification of an Advanced Soil-Structure Interaction Model for Offshore Wind Turbines

The Norwegian Geotechnical Institute (NGI) has developed a new macro-element model that accounts for the soil-structure interaction in offshore wind turbines. This development was done as part of the REDWIN (REDucing cost of offshore WINd by integrated structural and geotechnical design) project. The focus of Phase II of the OC6 project was to integrate REDWIN’s new soil-structure modeling capability into the coupled modeling tools that are used to design fixed-bottom offshore wind systems. The integration was then verified through a series of load cases using an example monopile-based offshore wind system examined within the WAS-XL project. This document provides the details needed to model the system examined in OC6 Phase II, using the new REDWIN modeling approach, as well as other standard modeling approaches, including apparent fixity, distributed springs, and coupled springs.

17 WIND ENERGY↗
DOE OSTI2024

Composite PEMs from Electrospun Crosslinkable Poly(Phenylene Sulfonic Acid)s (Final Technical Report)

The main objective of this project is to fabricate and demonstrate superior fuel cell performance of an electrospun composite all-hydrocarbon, non-PFSA membrane. The project builds on two earlier, DOE-funded studies demonstrating high proton conductivity, even at very low humidity of crosslinkable poly(phenylenesulfonic acid), cPPSA, solution cast films, and high durability of electrospun perfluorosulfonic acid (PFSA) composite membranes. Most project milestones were fully met but the best membrane conductivity and fuel cell performance were obtained with membranes that did not contain electrospun sulfonated polyphenylene, as initially planned. Instead, an excellent performance was achieved with membranes fabricated by pore-filling, either with electrospun poly(phenyl sulfone) scaffolds or with commercial, expanded polytetrafluoroethylene scaffolds. Fuel cell testing demonstrated performance better than that of Nafion 211 or Nafion XL, particularly at lower cell humidification levels with significantly lower hydrogen crossover. No accelerated stress testing was performed, due to the initial numerous difficulties with controlling the copolymerization reaction, which took excessive amount of time to overcome. Potential scale-up of the proposed composite membrane technology can aid in boosting the fuel cell power output and simplification of the cell hydration system.

08 HYDROGEN↗
DOE OSTI2022

Mitigating cerium migration for perfluorosulfonic acid membranes using organic ligands

Improving the electrochemical stability of proton exchange membranes is a pressing priority for heavy-duty fuel cell vehicles. The lifetime of the most widely used perfluorosulfonic acid membranes is limited by reactive free radicals generated inside the system. Cerium has been found to reduce the chemical degradation of the membranes. However, cerium migration during fuel cell operation limits the chemical durability enhancement effect expected from the radical scavenging activity of cerium. Here we investigate a wide range of organic immobilizers for cerium, measuring their suitability concerning cerium retention, radical scavenging activity, and fuel cell performance. We report that partially fluorinated phosphonic acids enhance cerium retention up to 45 times and reduce fluoride emission rate by 38% compared to the commercial Nafion™ XL membrane pre-impregnated with cerium. The energetics of cerium-phosphonic acid complex systems by density functional theory calculations rationalizes effective cerium immobilization.

30 DIRECT ENERGY CONVERSION↗
DOE OSTI2022

MEGASIM: Lifetimes and Resonances of Earth Trojan Asteroids—The Death of Primordial ETAs?

Abstract We present an analysis of lifetimes and resonances of Earth Trojan Asteroids (ETAs) in the MEGASIM data set. Trojan asteroids co-orbit the Sun with a planet, but remain bound to the Lagrange points, L4 (60° leading the planet) or L5 (60° trailing). In the circular three-body approximation, the stability of a Trojan asteroid depends on the ratio of the host planet mass and the central mass. For the inner planets, the range of stability becomes increasingly small, so perturbations from the planets have made primordial Trojans rare. To date, there have been just two ETAs (2010 TK 7 and 2020 XL 5 ), several Mars Trojans, and a Venus Trojan discovered. The estimated lifetimes of the known inner system Trojans are shorter than a million years, suggesting they are interlopers rather than members of a stable and long-lasting population. With the largest ETA n -body simulation to date, we are able to track their survival across a wide initialized parameter space. We find that the remaining fraction of ETAs over time is well fit with a stretched exponential function that, when extrapolated beyond our simulation run time, predicts zero ETAs by 2.33 Gyr. We also show correlations between ETA ejections and the periods of the Milankovitch cycles. Though Earth’s orbital dynamics dominate the instabilities of ETAs, we provide evidence that ETA ejections are linked to resonances found in the variation of the orbital elements of many if not all of the planets.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

Introducing MEGASIM: Multitudinous Earth Greek/Trojan Asteroid SIMulation*

Abstract We announce the completion of two new Earth Trojan Asteroid (ETA) simulations. ETAs co-orbit the Sun with Earth and remain loosely bound to the fourth or fifth Lagrange points. To date, two ETAs have been detected (2010 TK 7 and 2020 XL 5 ); however, based on their orbits, these are likely temporary captures rather than members of a primordial population. The motivation for our simulations is multi-faceted: (1) the lack of a detected population despite literature claims of stability over the age of the solar system, (2) ETAs are important for both solar system science and planetary defense, and (3) the proximity of ETAs makes them prime candidates for space exploration missions. These simulations are of extremely high fidelity, large in number and long in simulation time. We will be releasing a series of papers based upon these simulations.

79 ASTRONOMY AND ASTROPHYSICS↗
NASA NTRS1981

Use of MAGSAT anomaly data for crustal structure and mineral resources in the US Midcontinent

The analysis and preliminary interpretation of investigator-B MAGSAT data are addressed. The data processing included: (1) removal of spurious data points; (2) statistical smoothing along individual data tracks, to reduce the effect of geomagnetic transient disturbances; (3) comparison of data profiles spatially coincident in track location but acquired at different times; (4) reduction of data by weighted averaging to a grid with 1 deg xl deg latitude/longitude spacing, and with elevations interpolated and weighted to a common datum of 400 km; (5) wavelength filtering; and (6) reduction of the anomaly map to the magnetic pole. Agreement was found between a magnitude data anomaly map and a reduce-to-the-pole map supporting the general assumption that, on a large scale (long wavelength), it is induced crustal magnetization which is responsible for major anamalies. Anomalous features are identified and explanations are suggested with regard to crustal structure, petrologic characteristics, and Curie temperature isotherms.

Carmichael, R. S.↗
NASA NTRS1982

Measurement accuracies in band-limited extrapolation

The problem of numerical instability associated with extrapolation algorithms is addressed. An attempt is made to estimate the bounds for the acceptable errors and to place a ceiling on the measurement accuracy and computational accuracy needed for the extrapolation. It is shown that in band limited (or visible angle limited) extrapolation the larger effective aperture L' that can be realized from a finite aperture L by over sampling is a function of the accuracy of measurements. It is shown that for sampling in the interval L/b absolute value of xL, b1 the signal must be known within an error e sub N given by e sub N squared approximately = 1/4(2kL') cubed (e/8b L/L')(2kL') where L is the physical aperture, L' is the extrapolated aperture, and k = 2pi lambda.

Kritikos, H. N.↗
NASA NTRS1993

The Automated Instrumentation and Monitoring System (AIMS) reference manual

Whether a researcher is designing the 'next parallel programming paradigm,' another 'scalable multiprocessor' or investigating resource allocation algorithms for multiprocessors, a facility that enables parallel program execution to be captured and displayed is invaluable. Careful analysis of execution traces can help computer designers and software architects to uncover system behavior and to take advantage of specific application characteristics and hardware features. A software tool kit that facilitates performance evaluation of parallel applications on multiprocessors is described. The Automated Instrumentation and Monitoring System (AIMS) has four major software components: a source code instrumentor which automatically inserts active event recorders into the program's source code before compilation; a run time performance-monitoring library, which collects performance data; a trace file animation and analysis tool kit which reconstructs program execution from the trace file; and a trace post-processor which compensate for data collection overhead. Besides being used as prototype for developing new techniques for instrumenting, monitoring, and visualizing parallel program execution, AIMS is also being incorporated into the run-time environments of various hardware test beds to evaluate their impact on user productivity. Currently, AIMS instrumentors accept FORTRAN and C parallel programs written for Intel's NX operating system on the iPSC family of multi computers. A run-time performance-monitoring library for the iPSC/860 is included in this release. We plan to release monitors for other platforms (such as PVM and TMC's CM-5) in the near future. Performance data collected can be graphically displayed on workstations (e.g. Sun Sparc and SGI) supporting X-Windows (in particular, Xl IR5, Motif 1.1.3).

Yan, Jerry↗
NASA NTRS1995

Exploring the temperature structure of coronal holes with a novel combination of visible Fe lines

The difficulty in establishing the temperature structure and temperature gradient within coronal holes from limb observations is due to the frequent veiling of coronal holes by hotter and denser quiet regions often surrounding them and shaping their boundaries. Nevertheless probing the coronal hole medium itself can be made with a judicious choice of spectral lines. We show how a set of visible forbidden Fe lines, namely Fe IX 3801, Fe X 6374 and Fe Xl 7892 A which are sensitive to plasma temperatures less than or equal to 10(exp 6) K can achieve this purpose. We propose to use these lines in a coordinated manner with coronagraph observations. In addition observations made with the Fe XIV 5303 A line should yield information about any hot material intercepting the line of sight. The proposed combination of these Fe lines offers a very powerful diagnostic tool for coronal hole temperatures and structures.

Habbal, Shadia Rifai↗
NASA NTRS1998

Electric Propulsion Options for a Magnetospheric Mapping Mission

The Twin Electric Magnetospheric Probes Exploring on Spiral Trajectories mission concept was proposed as a Middle Explorer class mission. A pre-phase-A design was developed which utilizes the advantages of electric propulsion for Earth scientific spacecraft use. This paper presents propulsion system analyses performed for the proposal. The proposed mission required two spacecraft to explore near circular orbits 0.1 to 15 Earth radii in both high and low inclination orbits. Since the use of chemical propulsion would require launch vehicles outside the Middle Explorer class a reduction in launch mass was sought using ion, Hall, and arcjet electric propulsion system. Xenon ion technology proved to be the best propulsion option for the mission requirements requiring only two Pegasus XL launchers. The Hall thruster provided an alternative solution but required two larger, Taurus launch vehicles. Arcjet thrusters did not allow for significant launch vehicle reduction in the Middle Explorer class.

Oleson, Steven↗
NASA NTRS1997

Research in X-ray Astronomy

This research grant supported an active sounding rocket program at Penn State University over a period of over 10 years. During this period, the grant supported at least 8 graduate students in Astronomy & Astrophysics for at least a portion of their research. During the same period, our group was involved in seven sounding rocket flights, launched from White Sands, New Mexico, and from Woomera, Australia. Most of these rocket flights, and most of the work supported by this grant, involved the use of X-ray CCD cameras. The first X-ray CCD camera ever flown in space was our sounding rocket observation of SN1987A (flight 36.030 in 1987). Subsequent flights utilized improved CCD detectors, culminating in the'state-of-the-art EEV detector developed for our CUBIC mission, which was flown on 36.093 last May. Data from the last three flights, which observed the diffuse X-ray background with CCDS, include detection of the OVII He(alpha) line in the high latitude diffuse background and detection of the Mg XI He(alpha) line in the North Polar Spur. These results have been reported at meetings of the American Astronomical Society and the SPIE. The analysis of flights 36.092 and 36.106 is part of Jeff Mendenhall's PhD thesis and will be published in the Astrophysical Journal next year. The 36.093 data are currently being analyzed by PhD student Laura Cawley. From 1990 to 1996 this grant supported our development and launch of the CUBIC instrument on the SAC-B satellite, which was designed to measure the spectrum of the soft X-ray diffuse background with moderate energy resolution and high S/N ratio. Unfortunately, this mission terminated shortly after launch due to a failure of the Pegasus XL launch vehicle. This work resulted in publication of 4 papers in the SPIE Proceedings and four others in refereed journals, in addition to several other conference proceedings and contributed papers. In addition to the CCD flights described above, this grant has supported preliminary development of a new sounding rocket payload utilizing a replicated Ni mirror that is being developed at PSU in collaboration with MSFC. Initial testing of the coating technology has produced promising results.

Source record↗
NASA NTRS1998

Distribution of a Generic Mission Planning and Scheduling Toolkit for Astronomical Spacecraft

This 2-year report describes the progress made to date on the project to package and distribute the planning and scheduling toolkit for the SWAS astronomical spacecraft. SWAS was scheduled to be launched on a Pegasus XL vehicle in fall 1995. Three separate failures in the launch vehicle have delayed the SWAS launch. The researchers have used this time to continue developing scheduling algorithms and GUI design. SWAS is expected to be launched this year.

Kleiner, Steven C.↗