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At least 613 records · Page 34

Structural basis for autophagy inhibition by the human Rubicon–Rab7 complex

Rubicon is a potent negative regulator of autophagy and a potential target for autophagy-inducing therapeutics. Rubicon-mediated inhibition of autophagy requires the interaction of the C-terminal Rubicon homology (RH) domain of Rubicon with Rab7–GTP. Here we report the 2.8-Å crystal structure of the Rubicon RH domain in complex with Rab7–GTP. Our structure reveals a fold for the RH domain built around four zinc clusters. The switch regions of Rab7 insert into pockets on the surface of the RH domain in a mode that is distinct from those of other Rab–effector complexes. Rubicon residues at the dimer interface are required for Rubicon and Rab7 to colocalize in living cells. Mutation of Rubicon RH residues in the Rab7-binding site restores efficient autophagic flux in the presence of overexpressed Rubicon, validating the Rubicon RH domain as a promising therapeutic target.

60 APPLIED LIFE SCIENCES↗

Geometric Interpretation of the Cluster Location Problem Part II: Application to the Pahala, Hawaii, Earthquake Sequence

In the companion “Theory” article, we presented a new framing of the seismic location problem in terms of differential geometry (Harris et al., 2025). From that viewpoint, we developed a “project and correct” approach for estimating the relative locations of earthquakes. Here, in this study, we use project and correct to estimate high-precision relative locations of events from an earthquake sequence beneath the town of Pahala, Hawaii, using high-precision correlation-derived picks. The sequence was active from 2020 through 2022 and produced many highly correlated signals at Hawaii Volcano Observatory (HVO) stations on the island of Hawaii. The data we inverted consisted of 2882 events with observations at 5 HVO stations. For comparison with the travel-time image, we also produced conventional hypocenter solutions using both the Bayesloc program (Myers et al., 2007, 2009) and a purpose-built double-difference code. There were obvious structural elements in the resulting image, the resolution of which we used to test the performance of the project and the correct algorithm. For the projection step, we first produced a 3D local basis using an singular value decomposition (SVD) of the 2882 groups of times. Projection of the travel-time vectors into this basis resulted in an image with structures similar to those produced by our conventional locators, but with distortion as predicted by theory. Removing the distortion requires an inverse operator generated from the metric tensor at the geometric centroid of the events. We compared two approaches to obtaining such an inverse operator. The first uses an estimate of the geographic centroid of the event cloud from the centroid of the travel-time data. The second approach uses the centroid of the conventionally produced locations. The first approach produces a corrected image very similar to the conventional results, but with a rotation. The corrected image produced using the conventionally derived centroid is a near-exact match to the conventional locations.

Dodge, Douglas A. [Lawrence Livermore National Lab↗

Fast and Accurate Core Analysis by the Full-Immersion Pressure-Pulse Decay: Part 1—Theory

Summary Core-scale measurements are considered the ground truth that oil and gas or electric utility companies use to predict the migration of fluids such as oil, natural gas, carbon dioxide, or brine deep underground during their extraction or injection operations. To provide a greater understanding of petrophysical properties of low-permeability geologic formations such as shales and tight gas sandstones, this study introduces a novel core-analysis procedure. The technique follows conventional pressure-pulse-decay permeametry, where the pressure in an inlet chamber adjacent to a cylindrical core plug undergoes a rapid pressurization, the system is shut in, and the pressure reaches a new equilibrium. However, unlike a standard unidirectional pressure-pulse decay, the full-immersion pressure-pulse decay (Hannon 2019) applies a pressure disturbance to the entire outer surface area of the sample. This article covers the numerical simulator designed to model flow through an anisotropic porous sample in this scenario. The model assumes distinct but uniform permeabilities along the radial and axial directions of the cylindrical plug sample. When extracting a plug vertically (or perpendicular to bedding), the permeability along the radial direction associates with the horizontal permeability (i.e., parallel to bedding), whereas in the axial direction, flow occurs perpendicular to bedding (a vertical permeability). Investigations of these model outputs demonstrate an approximately 20-fold decrease in time to complete a full-immersion experiment compared with conventional pressure-pulse decay. Furthermore, the pressure-decay curves resulting from the full-immersion method have slightly different shapes than those resulting from other unidimensional transient methods. These differences begin to demonstrate that, under achievable experimental conditions, the analysis of pressure data from one full-immersion test could enable the simultaneous estimation of the apparent permeabilities parallel and perpendicular to bedding of a cylindrical sample in addition to its porosity. A follow-up article finalizes the proof of this capability with a parameter-estimation procedure and presents experimental verification through a proof-of-concept study. Described in greater detail in that article, the parameter estimator requires multiple forward simulations to analyze the data, which behooves minimizing the compute time for each simulation. By using an alternating direction implicit time-marching scheme and a structured but variably spaced grid, the numerical simulator built for this purpose provides a forward model output with suitable accuracy in approximately 0.5 seconds.

Energy & Fuels↗

Volumetrically Absorbing Thermal Insulator (VATI) for High-temperature Receivers

This project seeks to exploit volumetric absorption of concentrated solar irradiation in a thin, high-temperature, thermally conductive medium. High efficiency thermal conversion is achieved by volumetric absorption of both incoming solar irradiation (short wavelength) and emitted irradiation (long wavelength), demonstrating a volumetrically absorbing thermally insulating (VATI) effect. The thermalized energy is conducted to the back wall, enclosing the working fluid (molten salt or supercritical CO 2 ). Reliance on conductive thermal transport requires a thermally conductive medium, in the absence of which large temperature gradients drive losses due to emission. The project’s outcomes are important to realize a cost-effective approach to reduce optical and thermal losses from CSP receivers at high temperatures (720°C). High-temperature stable and commercially available porous SiC structures (open-cell foams) were explored as a volumetrically absorbing and thermally insulating layer. To the best of our knowledge, the current state-of-the-art for industrially deployed coatings is Pyromark. However, Pyromark suffers degradation at 700+°C and diurnal temperature changes. This necessitates periodic recoating, and the downtime increases the overall levelized cost of energy (LCOE) production. On the other hand, contemporary research activities have generated significant advances in the development of selective emitter coatings, which present challenges with costs, scalability, and stability. The pursued approach alleviates these concerns by developing a receiver that utilizes the inherent structure of high-temperature stable porous materials to enable robust and cost-effective receivers which require no periodic maintenance downtimes. The overall goal of the project is to experimentally demonstrate a figure of merit (FOM) of 0.92 at a temperature of 720°C and solar irradiation of 1000x concentration with porous receivers. The relevant crystallographic (phase) optical and thermal properties of porous SiC were first characterized. Second, the 3-D geometry of the porous SiC was analyzed using micro-X-ray tomography and converted to CAD data using image processing analysis. Utilizing this 3-D geometry and relevant optical/thermal properties, Monte Carlo- Ray Tracing (MCRT) analysis was performed to extract important parameters governing solar-thermal energy conversion such as extinction coefficient (β, 1/m), scattering albedo (ω) and the scattering phase function (Φ). These properties were then integrated into an in-house radiative and conduction transport model to solve for temperature and transport fluxes characterizing the solar-thermal energy conversion. This model was utilized to predict the FOM for various SiC porous geometries and to identify the highest possible FOM. Testing of the optimized porous structures will be accomplished with a custom-built high-accuracy (< ±4%) FOM measurement test-stand and a 1000x solar concentrator. When neglecting convective losses and resistance at the open boundary and the back wall, the optimized SiC foam leads to a FOM of 0.84. This FOM does not surpass the performance of Pyromark 2500. Yet, conversely to Pyromark 2500, SiC is stable at high temperatures and does not degrade over time. Also, it is possible to boost the FOM of SiC by engineering its effective thermal conductivity and its scattering albedo. A FOM of 0.92 is predicted for an optimized foam by accounting for convective losses and resistance at the open boundary and the back wall. This largely exceeds the FOM of Pyromark 2500 (~0.86) predicted by neglecting convective losses and resistance. Therefore, further engineering of the foam could lead to unprecedented FOMs.

14 SOLAR ENERGY↗

The Circular Home: Development and Demonstration of a Net Negative Carbon, Reusable Residence

This project started the development of an innovative modular building system intended for residential construction. The project was centered around single-family homes that were carbon-negative cradle-to-grave over a 100 year time frame, which is approximately double the current standard for operational life. The project sought to accomplish this objective by designing the modular home in a manner that ensures circularity, where the main house components can be used over several consecutive 50-year lifespans. To accomplish these objectives, this project utilized integrated design with the inclusion of life-cycle assessment to design the single-family house for architectural, structural, energy, mechanical, thermal, and moisture demands, while ensuring carbon negativity and annual net-zero energy use. The core technology of this project was the use of cross-laminated timber and biogenic materials, such as wood-fiber insulation, in the construction of the modular building units. The robustness and factory manufacturing ability of cross-laminated timber allow for factory construction of most of the home, which minimizes on-site time, saving money and reducing construction waste. During this project, initial milestones were met that delivered the architectural plans for the circular home and an initial structural testing matrix. Compared to current code-built homes, which average 13 kg CO2eq. / ft2 and are demolished at their end of life, the circular home has an estimated -30 kg CO2eq. / ft2 of embodied carbon emissions during its first build iteration. It is estimated that approximately 60%-70% of the total building mass could be reused and/or recycled during subsequent rebuilds. This project was concluded at approximately the 1/3 point and a separate project was established to conclude the remaining milestones. This project promises to benefit the public by delivering another option for single-family, and eventually multi-family, housing using a novel building construction system. The system of reusable modular construction facilitates not only lower emissions during the first building iteration, but also lower emissions during subsequent iterations that drastically reduce waste and help society meet its climate goals. Many other industries, such as clothing and technology sectors, are starting to focus on circularity and this project adds the residential building construction industry to that list.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Architecture of the chromatin remodeler RSC and insights into its nucleosome engagement

Eukaryotic DNA is packaged into nucleosome arrays, which are repositioned by chromatin remodeling complexes to control DNA accessibility. The Saccharomyces cerevisiae RSC (Remodeling the Structure of Chromatin) complex, a member of the SWI/SNF chromatin remodeler family, plays critical roles in genome maintenance, transcription, and DNA repair. Here, we report cryo-electron microscopy (cryo-EM) and crosslinking mass spectrometry (CLMS) studies of yeast RSC complex and show that RSC is composed of a rigid tripartite core and two flexible lobes. The core structure is scaffolded by an asymmetric Rsc8 dimer and built with the evolutionarily conserved subunits Sfh1, Rsc6, Rsc9 and Sth1. The flexible ATPase lobe, composed of helicase subunit Sth1, Arp7, Arp9 and Rtt102, is anchored to this core by the N-terminus of Sth1. Our cryo-EM analysis of RSC bound to a nucleosome core particle shows that in addition to the expected nucleosome-Sth1 interactions, RSC engages histones and nucleosomal DNA through one arm of the core structure, composed of the Rsc8 SWIRM domains, Sfh1 and Npl6. Our findings provide structural insights into the conserved assembly process for all members of the SWI/SNF family of remodelers, and illustrate how RSC selects, engages, and remodels nucleosomes.

59 BASIC BIOLOGICAL SCIENCES↗

Correlating measured and predicted inplane stability characteristics for an advanced bearingless rotor

The experimental data were obtained from hover tests for a scaled model of an advanced bearingless main rotor. Both isolated rotor and ground resonance conditions were tested. Test parameters included blade built-in cone and sweep angles, rotor inplane structural damping, pitch link location and fuselage structural damping. Analytical results for the conditions tested were obtained using current Bell Helicopter analyses. In addition, variations in the analytical models were made to assess their impact on the correlation between computed and measured results. Results are presented in tabular and graphical form.

Weller, W. H.↗

Correlation and evaluation of inplane stability characteristics for an advanced bearingless main rotor

A program of experimental and analytical research was performed to demonstrate the degree of correlation achieved between measured and computed rotor inplane stability characteristics. The experimental data were obtained from hover and wind tunnel tests of a scaled bearingless main rotor model. Both isolated rotor and free-hub conditions were tested. Test parameters included blade built-in cone and sweep angles; rotor inplane structural stiffness and damping; pitch link stiffness and location; and fuselage damping, inertia, and natural frequency. Analytical results for many test conditions were obtained. In addition, the analytical and experimental results were examined to ascertain the effects of the test parameters on rotor ground and air resonance stability. The results from this program are presented herein in tabular and graphical form.

Weller, W. H.↗

Measured and calculated inplane stability characteristics for an advanced bearingless main rotor

A program of experimental and analytical research has been performed to demonstrate the effects of rotor and fuselage design parameters on rotor in-plane stability, including aeromechanical stability. The experimental data were obtained from hover and wind-tunnel tests of a scaled advanced bearingless main rotor model. Both isolated-rotor and free-hub conditions were tested. Test parameters included blade built-in cone and sweep angles; rotor inplane structural stiffness and damping; pitch link stiffness and location; and fuselage natural frequency, damping, and inertia. The results show that rotor blade structural damping is one of the most influential design parameters in obtaining acceptable aeromechanical stability margins. Other parameters, such as blade cone angle, pitch link location (rotor delta 3) and anisotropic hub damper configurations, may be used to improve stability margins, but their individual effects are subtle.

Weller, W. H.↗

The experiments of LIPS 3

LIPS 3 is a member of the Living Plume Shield series of spacecraft. In each LIPS project, the plume shield, a simple sheet metal cone, was structurally stiffened, and an active satellite was then built around it. The original purpose of the plume shield was to prevent the plume from solid propellent engines, which are fired outside the atmosphere after the aerodynamic shroud is jettisoned, from reaching the primary payload. The surface of LIPS 3 facing the plume also functioned in this manner, but the anterior surfaces were unaffected, and it was there that all solar arrays, sensors, and experiments were mounted. The purpose of LIPS 3 was to provide a test bed for new space power sources. With the long delays projected for schedules of the STS and other major launch systems, it appeared that a decade might pass before long term flight data could be obtained on many new and innovative power sources. The fact that a launch scheduled for early in 1987 required a plume shield was seen as a unique opportunity to obtain some of this data in a timely manner. The LIPS 3 system, the experiments placed aboard, and the experiment data acquisition subsystem are described. Various problems were encountered during integration and after launch; those which appear to effect the accuracy of experimental results are discussed. A preliminary description is given of the accuracy of the flight experiment data.

Severns, J. G.↗

TokenPasser: A petri net specification tool

In computer program design it is essential to know the effectiveness of different design options in improving performance, and dependability. This paper provides a description of a CAD tool for distributed hierarchical Petri nets. After a brief review of Petri nets, Petri net languages, and Petri net transducers, and descriptions of several current Petri net tools, the specifications and design of the TokenPasser tool are presented. TokenPasser is a tool to allow design of distributed hierarchical systems based on Petri nets. A case study for an intelligent robotic system is conducted, a coordination structure with one dispatcher controlling three coordinators is built to model a proposed robotic assembly system. The system is implemented using TokenPasser, and the results are analyzed to allow judgment of the tool.

Mittmann, Michael↗

Variability Analysis and the Structure of Active Galactic Nuclei

This five-year Long-Term Space Astrophysics grant provided the support for several major steps in advancing our knowledge of the internal structure of active galactic nuclei. The single largest portion of this program had to do with the development and application of techniques for "reverberation mapping", the use of spectral monitoring of several different bands related by radiation reprocessing to infer the internal geometry of sources. Major steps were taken in this regard, particularly in establishing the distribution in radius of emission line material, and in relating the apparent reprocessing of continuum bands to the underlying structure of the accretion disk. Another major effort built directly upon these results. Once the case for continuum reprocessing was made by the monitoring, it next behooved us to understand the spectral output of AGN as a result of this reprocessing. As a result, our view of continuum production in AGN is now much better focussed on the key problems. A third focus of effort had to do with the nature of X-ray variability in AGN, and what it can tell us about the dynamics of extremely hot material in the immediate outskirts of the supermassive black holes that form the central engines of active galactic nuclei. In addition to these primary efforts, this grant also supported many other, smaller projects. Several of these were demonstrations of how the material spewed out of AGN in relativistic.ets generate the radiation by which we observe them. J Finally, the portion of this study that had to do with continuum production by accretion disks in AGN led naturally to several papers in which new developments were presented having to do with "advection-dominated accretion disks", those disks in which accretion appears to proceed at a substantial rate, but in which radiation processes are weak.

Krolik, Julian H.↗

Variability Analysis and the Structure of Active Galactic Nuclei

This five-year Long-Term Space Astrophysics grant provided the support for several major steps in advancing our knowledge of the internal structure of active galactic nuclei. The single largest portion of this program had to do with the development and application of techniques for 'reverberation mapping, the use of spectral monitoring of several different bands related by radiation reprocessing to infer the internal geometry of sources. Major steps were taken in d-ds regard, particularly in establishing the distribution in radius of emission line material, and in relating the apparent reprocessing of continuum bands to the underlying structure of the accretion disk. Another major effort built directly upon these results. Once the case for continuum reprocessing was made by the monitoring, it next behooved us to understand the spectral output of AGN as a result of this reprocessing. As a result, our view of continuum production in AGN is now much better focussed on the key problems. A third focus of effort had to do with the nature of X-ray variability in AGN, and what it can tell us about the dynamics of extremely hot material in the immediate outskirts of the supermassive black holes that form the central engines of active galactic nuclei. In addition to these primary efforts, this grant also supported many other, smaller projects. Several of these were demonstrations of how the material spewed out of AGN in relativistic jets generate the radiation by which we observe them. Finally, the portion of this study that had to do with continuum production by accretion disks in AGN led naturally to several papers in which new developments were presented having to do with 'advection-dominated accretion disks', those disks in which accretion appears to proceed at a substantial rate, but in which radiation processes are weak.

Krolik, Julian H.↗

Compressive Testing of Stitched Frame and Stringer Alternate Configurations

A series of single-frame and single-stringer compression tests were conducted at NASA Langley Research Center on specimens harvested from a large panel built using the Pultruded Rod Stitched Efficient Unitized Structure (PRSEUS) concept. Different frame and stringer designs were used in fabrication of the PRSEUS panel. In this report, the details of the experimental testing of single-frame and single-stringer compression specimens are presented, as well as discussions on the performance of the various structural configurations included in the panel.

Leone, Frank A., Jr.↗

Compressive Loading and Modeling of Stitched Composite Stiffeners

A series of single-frame and single-stringer compression tests were conducted at NASA Langley Research Center on specimens harvested from a large panel built using the Pultruded Rod Stitched Efficient Unitized Structure (PRSEUS) concept. Different frame and stringer designs were used in fabrication of the PRSEUS panel. In this paper, the details of the experimental testing of single-frame and single-stringer compression specimens are presented, as well as discussions on the performance of the various structural configurations included in the panel. Nonlinear finite element models were developed to further understand the failure processes observed during the experimental campaign.

Leone, Frank A., Jr.↗

Robotically Assembled Aerospace Structures: Digital Material Assembly using a Gantry-Type Assembler

This paper evaluates the development of automated assembly techniques for discrete lattice structures using a multi-axis gantry type CNC machine. These lattices are made of discrete components called "digital materials." We present the development of a specialized end effector that works in conjunction with the CNC machine to assemble these lattices. With this configuration we are able to place voxels at a rate of 1.5 per minute. The scalability of digital material structures due to the incremental modular assembly is one of its key traits and an important metric of interest. We investigate the build times of a 5x5 beam structure on the scale of 1 meter (325 parts), 10 meters (3,250 parts), and 30 meters (9,750 parts). Utilizing the current configuration with a single end effector, performing serial assembly with a globally fixed feed station at the edge of the build volume, the build time increases according to a scaling law of n4, where n is the build scale. Build times can be reduced significantly by integrating feed systems into the gantry itself, resulting in a scaling law of n3. A completely serial assembly process will encounter time limitations as build scale increases. Automated assembly for digital materials can assemble high performance structures from discrete parts, and techniques such as built in feed systems, parallelization, and optimization of the fastening process will yield much higher throughput.

Manufacturing↗

Study of the performance of the Micromegas chambers for the ATLAS Muon Spectrometer Upgrade

The ATLAS collaboration at LHC has chosen the Micromegas (Micro Mesh Gaseous Structure) technology along with the small-strip Thin Gap Chambers (sTGC) for the high luminosity upgrade of the inner muon station in the high-rapidity region, the so called New Small Wheel (NSW). It employs eight layers of Micromegas detectors and eight layers of sTGC. The NSW project requires fully efficient Micromegas chambers with spatial resolution down to 100 μm in the precision coordinate for momentum reconstruction, and at mm level in the azimuthal (second) coordinate, over a total active area of 1200 m{sup 2}, with a rate capability up to about 15 kHz/cm{sup 2} and operation in a moderate magnetic field up to B = 0.4 T. The required tracking capability is provided by the intrinsic space resolution combined with a mechanical precision at the level of 30 μm along the precision coordinate. Together with the precise tracking capability the Micromegas chambers should provide a trigger signal. Several tests have been performed on small (10x10 cm{sup 2}) and large (1 x 1 m{sup 2}) size single gap chambers prototypes using high energy hadron beams at CERN, low and intermediate energy (0.5-5 GeV) electron beams at Frascati and DESY, neutron beams at Demokritos (Athens) and Garching (Munich) and cosmic rays. More recently two quadruplets with dimensions 1.2 x 0.5 m{sup 2} and the same configuration and structure foreseen for the NSW upgrade have been built at CERN and tested with high energy pions/muons beam. Results obtained in the most recent tests, in different configurations and operating conditions, in dependence with the magnetic field, will be presented, along with a comparison between different read-out electronics, either based on the APV25 chips, or based on a new digital front-end ASIC developed in its second version (VMM2) as a new prototype of the final chip that will be employed in the NSW upgrade. (authors)

43 PARTICLE ACCELERATORS↗

SERPENT 2 and TRIPOLI-4 neutronics benchmarking of the Jules Horowitz reactor

Jules Horowitz Reactor (JHR) is a future center for nuclear material testing in Europe, currently under construction at CEA Cadarache in southern France. It has been modelled extensively with CEA's HORUS3D/N neutron calculation package, that includes a Monte-Carlo neutron transport code TRIPOLI-4. In order to support the future computational analyses on the reactor core physics, VTT's Monte Carlo neutronics code SERPENT 2 has been used to create an alternative model of the JHR, taking advantage of the pre-existing Constructive Solid Geometry (CSG) structures on which the TRIPOLI-4 model was built. This work describes a benchmark, in which two JHR core configurations were analyzed using both of these models. The first configuration is a fresh fuel core at the beginning of life, in which aluminum based dummy-devices are installed in the reactor test positions. The second configuration represents the end-of-cycle equilibrium core with a heterogeneous burnup distribution, in which CALIPSO devices containing cladding material samples are installed at the in-core experimental positions, while the reflector positions are occupied by DEN-REP devices containing UO{sub 2} fuel. Neutron flux spectra and heat deposition are the parameters of interest in this study, due to their high importance in creating the desired experimental irradiation environment. The impact of delayed gamma energy deposition will be studied in detail, since the two models account for it with different methods. This work aims to establish a SERPENT 2 model of JHR, understanding its differences and agreements with TRIPOLI-4, and discussing its potential future applications. (authors)

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗