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NASA NTRS1990

Image recovery from edge primitives

A method for extracting edge primitives from Mach-band patterns is presented together with a method for recovering image representations of features outlined by the edge boundaries. The accuracy, stability, and resolution of these representations are assessed. Since these representations are most commonly used in characterizing targets, this method of low-level processing offers new opportunities for computer vision and high data-compressing coding. Two bandpass filters are considered, the spatially invariant Laplacian of Gaussian filter and spatially variant intensity-dependent spatial (IDS) summation. It is shown that the recovery from the IDS bandpass data is particularly advantageous in applications for which robustness to local and temporal variations in illumination is important. It is concluded that the edge primitives extracted from bandpassed images can be an efficient way to store, transmit, and represent images.

Alter-Gartenberg, Rachel↗

DOE OSTI2016

Predictions for the drive capabilities of the RancheroS Flux Compression Generator into various load inductances using the Eulerian AMR Code Roxane

The Ranchero Magnetic Flux Compression Generator (FCG) has been used to create current pulses in the 10-100 MA range for driving both “static” low inductance (0.5 nH) loads1 for generator demonstration purposes and high inductance (10-20 nH) imploding liner loads2 for ultimate use in physics experiments at very high energy density. Simulations of the standard Ranchero generator have recently shown that it had a design issue that could lead to flux trapping in the generator, and a non- robust predictability in its use in high energy density experiments. A re-examination of the design concept for the standard Ranchero generator, prompted by the possible appearance of an aneurism at the output glide plane, has led to a new generation of Ranchero generators designated the RancheroS (for swooped). This generator has removed the problematic output glide plane and replaced it with a region of constantly increasing diameter in the output end of the FCG cavity in which the armature is driven outward under the influence of an additional HE load not present in the original Ranchero. The resultant RancheroS generator, to be tested in LA43S-L13, probably in early FY17, has a significantly increased initial inductance and may be able to drive a somewhat higher load inductance than the standard Ranchero. This report will use the Eulerian AMR code Roxane to study the ability of the new design to drive static loads, with a goal of providing a database corresponding to the load inductances for which the generator might be used and the anticipated peak currents such loads might produce in physics experiments. Such a database, combined with a simple analytic model of an ideal generator, where d(LI)/dt = 0, and supplemented by earlier estimates of losses in actual use of the standard Ranchero, scaled to estimate the increase in losses due to the longer current carrying perimeter in the RancheroS, can then be used to bound the expectations for the current drive one may apply to any load assembly in future experiments.

42 ENGINEERING↗

DOE OSTI2025

UQpy Version 4.2: Uncertainty quantification with Python

We introduce a new module for the UQpy software package which extends its capabilities into the field of Scientific Machine Learning. This module builds on PyTorch to create a flexible and robust platform for uncertainty quantification in machine learning. The scientific machine learning module of UQpy introduces custom layers, neural networks, and neural network trainers that are compatible with torch version 2.2.2 and allow for “plug and play” integration into existing torch code.

Neural networks↗

DOE OSTI2026

Auxiliary heating and current drive physics for the ST-E1 fusion power plant

This work describes the physics basis for the proposed auxiliary heating and current drive system on the ST-E1 fusion power plant. The ST-E1 flattop plasma considered here is fully non-inductive with a bootstrap fraction of 0.9 and the remaining current driven by EC waves. Using the recently published physics-based optimization method for EC launchers (Lopez et al 2025 Plasma Phys. Control. Fusion 67 055012), we show that the target flattop ECCD can be achieved with a net efficiency of 52 kA MW −1 using fundamental O-mode (O1) with frequency range 160–200 GHz launched from the low-field side top half of the vacuum vessel (LFS top-launch). From considering two candidate rampup scenarios, we conclude that LFS top-launch O1 ECCD can be equally effective during the early stages of plasma operation, although poloidal steering might be needed. X-mode waves injected from the LFS midplane are also shown to be effective for rampup even when T e < 1 keV. We also present modeling results for the pre-conceptual design of an ICRH system proposed for ST-E1. Using TORIC, we find that an ICRH system aiming for 42–48 MHz and toroidal mode number n φ ~ 10 robustly achieves dominant ion damping via Helium-3 minority heating transitioning to second-harmonic Tritium heating. We then show that such waves can be efficiently generated by a 5-strap traveling-wave antenna (TWA) using the Petra-M code. The TWA has a 40–45 MHz passband within which ~60% of the power entering the TWA is coupled to the plasma with the remaining ~40% of the power being transmitted through the TWA and possibly recirculated; the power reflected back into the transmission lines is negligible. This passband structure persists even when the evanescent distance is increased by a factor of two, or when the magnetic-field angle is increased by 30°, demonstrating inherent load resilience that will be crucial for effective ICRH on ST-E1.

electron cyclotron↗

DOE OSTI2022

ACES: Infrastructure As Code. Model Optimization and Performance Capability

Infrastructure as Code (IaC) refers to managing infrastructure (networks, physical/virtual machines, storage, and connection topology) in a descriptive model/language, rather than configuring it manually or using interactive configuration tools. Just like source code can be compiled to generate the same binary code, IaC enables generating the same environment every time it is applied. IaC is a key DevOps practice and is generally used in conjunction with continuous integration (CI) and continuous delivery (CD). In CI, all code changes are merged into a mainline branch and validated multiple times a day as developers check in their changes to the source code. In CD on the other hand, code changes are automatically packaged for a new release-to-production on a regular basis. This typically enables teams to deliver software changes much more quickly and often. Developing and managing the ACES platform using (IaC) is vital for the robust deployment and continued sustainment of this foundational computing capability. IaC and DevOps practices will help us solve many of the common challenges often encountered in developing and maintaining compute infrastructure. First, it will make the provisioning, deployment, and maintenance of the compute infrastructure across multiple environments much more efficient. Second, these processes help make the overall system much more stable by continuously testing new changes as they are introduced to the system. Third, it allows us to be much more confident of the security controls in place since they can be tested as part of the CI process and all new changes can be audited and tracked. Finally, IaC enables the ACES Platform to be adaptable to the emerging technologies due to its ability to spin up different test beds to evaluate and incorporate these technologies. This document addresses common infrastructure-management challenges, describes what happens if they are not addressed, and highlights the value of utilizing IaC to tackle them. Finally, we will provide a high-level overview of the IaC and DevOps practices being utilized by the ACES Platform team.

97 MATHEMATICS AND COMPUTING↗

NASA NTRS2006

Reentry-Vehicle Shape Optimization Using a Cartesian Adjoint Method and CAD Geometry

A DJOINT solutions of the governing flow equations are becoming increasingly important for the development of efficient analysis and optimization algorithms. A well-known use of the adjoint method is gradient-based shape. Given an objective function that defines some measure of performance, such as the lift and drag functionals, its gradient is computed at a cost that is essentially independent of the number of design variables (e.g., geometric parameters that control the shape). Classic aerodynamic applications of gradient-based optimization include the design of cruise configurations for transonic and supersonic flow, as well as the design of high-lift systems. are perhaps the most promising approach for addressing the issues of flow solution automation for aerodynamic design problems. In these methods, the discretization of the wetted surface is decoupled from that of the volume mesh. This not only enables fast and robust mesh generation for geometry of arbitrary complexity, but also facilitates access to geometry modeling and manipulation using parametric computer-aided design (CAD). In previous work on Cartesian adjoint solvers, Melvin et al. developed an adjoint formulation for the TRANAIR code, which is based on the full-potential equation with viscous corrections. More recently, Dadone and Grossman presented an adjoint formulation for the two-dimensional Euler equations using a ghost-cell method to enforce the wall boundary conditions. In Refs. 18 and 19, we presented an accurate and efficient algorithm for the solution of the adjoint Euler equations discretized on Cartesian meshes with embedded, cut-cell boundaries. Novel aspects of the algorithm were the computation of surface shape sensitivities for triangulations based on parametric-CAD models and the linearization of the coupling between the surface triangulation and the cut-cells. The accuracy of the gradient computation was verified using several three-dimensional test cases, which included design variables such as the free stream parameters and the planform shape of an isolated wing. The objective of the present work is to extend our adjoint formulation to problems involving general shape changes. Factors under consideration include the computation of mesh sensitivities that provide a reliable approximation of the objective function gradient, as well as the computation of surface shape sensitivities based on a direct-CAD interface. We present detailed gradient verification studies and then focus on a shape optimization problem for an Apollo-like reentry vehicle. The goal of the optimization is to enhance the lift-to-drag ratio of the capsule by modifying the shape of its heat-shield in conjunction with a center-of-gravity (c.g.) offset. This multipoint and multi-objective optimization problem is used to demonstrate the overall effectiveness of the Cartesian adjoint method for addressing the issues of complex aerodynamic design.

Nemec, Marian↗

NASA NTRS2010

Performance Analysis of Apollo Navigational Starter Routine

The focus of this project is to recreate and analyze the effectiveness of the original Apollo Starter Routine (ASR) which was used to generate the state vector of the Apollo spacecraft based on a series of radiometric observations. The original Apollo navigation software is unavailable in a modern programming language and the original coding has not been preserved. This necessitates its recreation using the original software documentation. Space Shuttle navigation software does not typically use the ASR or an algorithm like it since the Shuttle s state vector is easily deduced from GPS information or other sources. However, this tactic will be ineffective when trying to determine the state vector of a craft approaching, departing or in orbit around the Moon since the GPS network faces the surface of the Earth, not outer space. The recreation of the ASR from the original documentation is therefore vital as a simulation baseline for the navigation software under development for the Constellation program. The algorithms that make up the ASR will be extracted from the original documentation and adapted for and then implemented in a modern programming language; the majority of it will be coded in Matlab. The ASR s effectiveness will then be tested using simulated tracking data. The ability of the ASR to handle realistically noisy data and the accuracy with which it generates state vectors were analyzed. The ASR proved to be robust enough to process data with range and angle noise as large as 10,000 meters and 10(exp -6) radians together and 300,000 meters and 5x10(exp -4) radians separately at Lunar distances. The ASR was able to handle marginally more noise at distances closer to the Earth where the angle noise was less significant. The ASR is capable of effectively processing 40-80 data points gathered at a rate of one per 20 seconds at close Earth orbit and up to 28-40 data points gathered at a rate of one per minute at distant Earth orbit and Lunar orbit.

Ivanov, Stoyan I.↗

DOE OSTI2020

The Accelerator Neutrino Neutron InteractionExperiment: Design, Construction and Preparationfor First Physics

This thesis covers work performed for the Accelerator Neutrino Neutron Interaction Experiment (ANNIE) between 2015 and 2020. ANNIE is a beamline neutrino experiment located at the Fermi National Accelerator Laboratory in Chicago. Its primary physics goals are the measurement of neutrino interaction cross-sections on oxygen, and a measurement of the multiplicity of final state neutrons from these interactions, both as functions of final state kinematics. In order to achieve these goals ANNIE will be pioneering the use of Large Area Picosecond Photodetectors and the use of gadolinium doping to enhance neutron visibility in a water Cherenkov detector. Over the time period of this thesis the ANNIE detector was constructed, an initial 'Phase I' background run was completed, the detector was decommissioned and then substantially upgraded in preparation for the main 'Phase II' physics run. At the time of writing ANNIE is being re-commissioned, with Phase II data taking anticipated to begin in 2021. During this time I spent 21/2 years on-site contributing to almost all aspects of hardware work, while performing software development for the simulation and analysis frameworks. As my first software task I developed Monte Carlo simulations of the detector response, based on the WCSim framework. While thismore » framework provided a starting point for the tank simulation significant modifications were required to implement the complete ANNIE detector system. This included a rewrite of the geometry, along with modifications to the photosensor definitions, hit collections, digitization, triggering, input and output interfaces, etc. To take advantage of improved modelling of neutrons in Geant4.10 the physics lists were also reimplemented in the new version format. As part of this work I determined performance metrics based on the output files, calculating kinematic acceptance, detector efficiency and expected event rates. My contributions on reconstruction focused primarily on the MRD, for which I implemented two track reconstruction algorithms, specialised for high and low energy muons. The high energy algorithm achieves >90% efficiency for tracks with at least 8 hits, and is robust against dead paddles and unrelated hits. The low energy algorithm performs a search in combination with tank information to provide sensitivity down to a single MRD hit. Early data handling work for the Phase I background run included writing the code for handling TDC hits and performing studies on neutron detection without the requirement of multi-hit coincidence. As the collaboration moved to a new framework for the Phase II analysis I performed a substantial amount of work to develop the codebase, implementing tools to perform tasks such as file IO, data parsing, waveform processing, event building, timestamp alignment, time clustering, hit residual calculation, event visualisation etc. I helped develop the python API for integrating multi-language tools, and ported the framework into a Singularity container to provide a self-contained environment that…« less

43 PARTICLE ACCELERATORS↗

DOE OSTI2017

Development of High Strength HEPA Filters for Use in Demanding Air and Gas Streams - 17644

High-efficiency particulate air (HEPA) filters are used in a wide variety of applications, including the removal of radioactive particulate from process off-gas streams and the venting of waste storage containers. Porvair Filtration Group, specializing in the design and manufacture of robust filters in numerous industries, has worked to develop HEPA filter designs for use in such high-demand nuclear process-gas and air streams. Using the requirements of section FK of the American Society of Mechanical Engineers AG-1 Code on Nuclear Air and Gas Treatment (ASME AG-1) as a guide, Porvair Filtration Group has designed filters which can withstand upset conditions to include elevated temperatures, high relative humidity, high particle-loading, and an unconventionally high differential pressure across the filter media; while maintaining excellent removal efficiencies. The process by which Porvair Filtration Group has reached optimized designs was based upon an extended test and development program. Design, manufacture, and testing of flat sheet media samples, geometrically equivalent model filters, and full-scale prototypes was performed at several Porvair Filtration Group facilities located in the United States and the United Kingdom. The methods and results of this development program are outlined in the following paper. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

DOE OSTI2020

Development and Validation of a Two-Phase Thermal-Hydraulic CFD Code NEK-2P

A project is underway to develop, verify and validate an advanced two-phase flow modeling capability for the highly-scalable, high-performance Computational Fluid Dynamics (CFD) code NEK5000. The goal of this work is to verify and validate the two-phase version of the NEK5000 code, named NEK-2P, to simulate the two-phase flow and heat transfer phenomena that occur in a Boiling Water Reactor (BWR) fuel bundle under various operating conditions. The NEK-2P two-phase flow models follow the approach used for the Extended Boiling Framework (EBF) previously developed at Argonne but include more fundamental physical models of boiling phenomena and advanced numerical algorithms for improved computational accuracy, robustness, and computational speed. The development of the NEK-2P two-phase solver and the implementation of the Extended Boiling Framework two-phase models were initially supported by Argonne National Laboratory (Argonne) through a Laboratory Directed Research and Development (LDRD) project during FY2014-2016. The development and validation of the two-phase models through analyses of selected two-phase boiling flow experiments was supported by the Nuclear Energy Advanced Modeling and Simulation (NEAMS) program in FY2017-2020. This report focuses on verification and validation of the water-steam boiling model NEK-2P Two-Phase, CFD code. The NEK-2P was validated with Nuclear Power Engineering Corporation (NUPEC) Pressurized Water Reactor (PWR) Sub-channel and Bundle Test (PSBT) void distribution benchmark. Three different simulations were performed and analyzed for various operating conditions such as wall-heat flux and sub-cooled inlet temperatures. Reasonably good agreement with measured data was obtained in predicting the measured void distributions. Simulations were performed for Virginia Tech. (VT) 3x3 rod bundle geometry with and without spacers. The preliminary results were presented for Simplified Spacer Grid (SSG). In addition, the implementation of interface reconstruction model was tested with one of the Becker benchmark Critical Heat Flux (CHF) experiments.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

DOE OSTI2026

PPPL Report on Reduced Modeling of Fusion Alpha Transport in ARC Burning Plasmas

We are reporting on the modeling of fusion alpha particle transport in the planned ARC fusion device being designed by the CFS (Commonwealth Fusion Systems: https://cfs.energy). The ARC tokamak is designed to operate in a burning-plasma regime characterized by a substantial population of fusion-born alpha particles. Alfvén eigenmode (AE) stability is assessed both analytically and numerically, incorporating alpha-particle drive, ion Landau, and radiative damping from thermal species and collisional damping from trapped electrons. Regions of unstable and near-threshold AE activity are mapped across ARC’s operational parameter space. Linear stability analysis with NOVA indicates multiple, often marginally unstable AEs, extending to toroidal mode numbers up to n= 30. The present report focuses on the ARC flat-top operating point prior to the sawtooth event. Alpha-particle transport on timescales exceeding the neoclassical slowing-down time is assessed using the NUBEAM module [1][2] of the TRANSP code [3], employing transport coefficients derived from the RBQ quasilinear modeling (cf. Appendix B). These global simulations identify favorable and unfavorable operating regimes with respect to alpha confinement, pressure redistribution, and overall alpha-heating efficiency. We also evaluate additional transport mechanisms—including neoclassical tearing mode (TM)–induced stochasticity, sawtooth-driven redistribution, and toroidal-field ripple using the kick model (cf. Appendix C) which makes use of the guiding-center code ORBIT, see Section 5. The kick model is integrated into TRANSP to enable self-consistent predictions of alpha-driven current formation and sustainment within the ARC scenario. Sensitivity scans are performed over the mode frequency, rational-surface alignment, island width, mode amplitude, and proximity of the limiter to the plasma. Our study provides an initial, physics-based guidance for machine design, operational planning, and equilibrium control, ensuring adequate alpha confinement and robust self-heating performance in ARC. Our simulations mostly targeted worst case scenarios, e.g. for TMs and sawteeth. Overall, we expect benign effects for the ARC scenario investigated in this work on fusion alpha confinement and losses in the presence of AEs, tearing modes and sawteeth. This report addresses three thrusts identified at the outset. The first thrust focuses on analytic estimates of the parametric dependencies of EP relaxation based on local AE stability simulations (Section 3). The second thrust involves global evaluations of AE stability using the NOVA, RBQ, and NUBEAM codes (Section 4). Finally, we investigate alpha-particle transport driven by low-frequency instabilities associated with sawteeth and tearing modes (Section 5).

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

DOE OSTI2018

Diagnostics for Undersampling and Clustering in Monte Carlo Criticality Calculations

For the past 40 years, it has been known from the theoretical work of Gelbard [1] and Brissenden [2] that the results from Monte Carlo (MC) criticality calculations are biased if the number of neutrons per generation is not sufficiently large. The computed k-effective eigenvalue will be lower than the actual eigenvalue, and the computed eigenfunction will be too low in high-importance regions and too high in low-importance regions. This difficulty is commonly called the undersampling problem for criticality calculations. The biases for undersampling were confirmed for practical, realistic problems with modern MC codes by Brown [3]. The solution to undersampling is simple - use a larger number of neutrons per generation to reduce the biases to levels that are negligible. Over the past few years, the OECD-NEA-WPNCS Expert Group on Advanced Monte Carlo Techniques (EGAMCT) [4,5,6] investigated an extreme form of undersampling called clustering. When the number of neutrons per generation is small, neutrons in successive generations tend to group together (cluster) due to correlations, and the clusters tend to migrate through the problem space. While the problems of undersampling and clustering are well known and well understood theoretically, there were no existing diagnostics for MC codes to determine whether a given calculation is using sufficient neutrons per generation to eliminate these problems. That is, no tools were available to diagnose biases due to undersampling or clustering. The tools described herein resolve this longstanding problem by providing 2 robust methods for detecting undersampling and clustering in MC criticality calculations. The diagnosis of undersampling and clustering is part of a larger effort to thoroughly overhaul the calculational methods for criticality problems, providing for automated sampling of the initial fission distribution, acceleration of the iteration convergence process, automated detection of convergence in the iterations and starting of the active tally cycles, and the diagnosis of undersampling. All of these new methods have been prototyped in a local modified version of mcnp6.2 [7] and tested on a variety of critical systems.

74 ATOMIC AND MOLECULAR PHYSICS↗

DOE OSTI2023

Massively parallel modeling and inversion of electrical resistivity tomography data using PFLOTRAN

Abstract. Electrical resistivity tomography (ERT) is a broadly accepted geophysical method for subsurface investigations. Interpretation of field ERT data usually requires the application of computationally intensive forward modeling and inversion algorithms. For large-scale ERT data, the efficiency of these algorithms depends on the robustness, accuracy, and scalability on high-performance computing resources. In this regard, we present a robust and highly scalable implementation of forward modeling and inversion algorithms for ERT data. The implementation is publicly available and developed within the framework of PFLOTRAN, an open-source, state-of-the-art massively parallel subsurface flow and transport simulation code. The forward modeling is based on a finite-volume discretization of the governing differential equations, and the inversion uses a Gauss–Newton optimization scheme. To evaluate the accuracy of the forward modeling, two examples are first presented by considering layered (1D) and 3D earth conductivity models. The computed numerical results show good agreement with the analytical solutions for the layered earth model and results from a well-established code for the 3D model. Inversion of ERT data, simulated for a 3D model, is then performed to demonstrate the inversion capability by recovering the conductivity of the model. To demonstrate the parallel performance of PFLOTRAN's ERT process model and inversion capabilities, large-scale scalability tests are performed by using up to 131 072 processes on a leadership class supercomputer. These tests are performed for the two most computationally intensive steps of the ERT inversion: forward modeling and Jacobian computation. For the forward modeling, we consider models with up to 122 ×106 degrees of freedom (DOFs) in the resulting system of linear equations and demonstrate that the code exhibits almost linear scalability on up to 10 000 DOFs per process. On the other hand, the code shows superlinear scalability for the Jacobian computation, mainly because all computations are fairly evenly distributed over each process with no parallel communication.

58 GEOSCIENCES↗

NASA NTRS1998

An Assessment of Artificial Compressibility and Pressure Projection Methods for Incompressible Flow Simulations

Performance of the two commonly used numerical procedures, one based on artificial compressibility method and the other pressure projection method, are compared. These formulations are selected primarily because they are designed for three-dimensional applications. The computational procedures are compared by obtaining steady state solutions of a wake vortex and unsteady solutions of a curved duct flow. For steady computations, artificial compressibility was very efficient in terms of computing time and robustness. For an unsteady flow which requires small physical time step, pressure projection method was found to be computationally more efficient than an artificial compressibility method. This comparison is intended to give some basis for selecting a method or a flow solution code for large three-dimensional applications where computing resources become a critical issue.

Kwak, Dochan↗

NASA NTRSDate not supplied

Design Under Uncertainty for Conceptual Aircraft Design Leveraging Analytical Gradients

The purpose of this paper is to extend previously demonstrated methodologies for design under uncertainty, leveraging analytical gradients to higher fidelity analysis for use in conceptual aircraft design. Previous work developed methods to generate analytical derivatives through polynomial chaos expansion, eliminating the need to estimate derivatives via complex step or finite difference. In this research, the authors build upon the methods to include physics-based aircraft design codes for aircraft design under uncertainty. This extends the previous work’s case study, which employed analytical aerodynamics and Breguet range estimations for wing design, to a higher fidelity level. In addition, this work extends previous work on interface development between the Uncertainty Quantification with Polynomial Chaos Expansion (UQPCE) software and Model-Based Systems Analysis and Engineering (MBSA&E) frameworks. This paper will discuss the development work necessary to perform multidisciplinary design under uncertainty as well as demonstrate the mechanics of interfacing UQPCE and conceptual aircraft design tools such as NASA’s Aviary code. In a case study, a conceptual aircraft design under uncertainty was conducted and compared against a traditional deterministic design. When given information about the uncertainty space from UQPCE, the optimizer was able to shape the output distribution and produce a more robust design

UQ↗

NASA NTRSDate not supplied

Design Under Uncertainty for Conceptual Aircraft Design Leveraging Analytical Gradients

UQ↗

DOE OSTI2020

Domesticating a food spoilage yeast into an organic acid–tolerant metabolic engineering host: Lactic acid production by engineered Zygosaccharomyces bailii

Lactic acid represents an important class of commodity chemicals, which can be produced by microbial cell factories. However, due to the toxicity of lactic acid at lower pH, microbial production requires the usage of neutralizing agents to maintain neutral pH. Zygosaccharomyces bailii, a food spoilage yeast, can grow under the presence of organic acids used as food preservatives. This unique trait of the yeast might be useful for producing lactic acid. With the goal of domesticating the organic acid!tolerant yeast as a metabolic engineering host, seven Z. bailii strains were screened in a minimal medium with 10 g/L of acetic, or 60 g/L of lactic acid at pH 3. The Z. bailii NRRL Y7239 strain was selected as the most robust strain to be en- gineered for lactic acid production. By applying a PAN!ARS!based CRISPR!Cas9 system consisting of a transfer RNA promoter and NAT selection, we demonstrated the targeted deletion of ADE2 and site!specific integration of Rhizopus oryzae ldhA coding for lactate dehydrogenase into the PDC1 locus. The resulting pdc1::ldhA strain produced 35 g/L of lactic acid without ethanol production. Here, this study de- monstrates the feasibility of the CRISPR!Cas9 system in Z. bailii, which can be applied for a fundamental study of the species.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2026

LaueMatching: an approach for rapid and robust indexing of Laue diffraction patterns

Traditional Laue diffraction pattern indexing often struggles with noisy data, weak signals, peak overlap and missing reflections, particularly from complex or deformed microstructures. Here, we introduce LaueMatching, a high-throughput indexing algorithm designed to overcome these limitations. LaueMatching utilizes a fundamentally different approach based on direct pattern correlation: experimentally pre-processed images are compared against a comprehensive pre-computed library of simulated diffraction patterns corresponding to a dense grid of possible orientations. This approach bypasses the need for explicit peak identification and fitting, steps that are often a failure point for traditional methods. The algorithm rapidly and robustly indexes multiple crystallographic orientations and crystal systems simultaneously, even from challenging patterns. LaueMatching's effectiveness and accuracy have been rigorously tested and validated on diverse experimental (Ni, Al, EuAl 2 O 4 ) and simulated diffraction patterns, demonstrating high-fidelity orientation refinement. Code to implement this approach on both CPU and GPU resources can be downloaded from https://github.com/AdvancedPhotonSource/LaueMatching.

36 MATERIALS SCIENCE↗