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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 73 records · Page 4
All sourcesNASA NTRSDOE OSTI
DOE OSTI2021

Omics-Lethal Human Viruses, West Nile Experiment WCN003

The purpose of this experiment was to evaluate the host response to wild-type West Nile virus (WNV NY99 clone 382) and mutant (WNVE218A) virus infection. Sample data was obtained frommouse cortical neuron tissue for mRNA and miRNA expression analysis. Biological replicate experiments were conducted in the same conditions and with data processed independently (WCN002). Secondary host-associated viral dataset downloads contain one or more statistically processed (normalization data transformation) quantitative dataset collections resulting in qualitative expression analyses of primary host-pathogen experimental study designs. Transcriptomics dataset downloads have a direct relationship to a primary sample submission corresponding to a specific West Nile virus infection.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Omics-Lethal Human Viruses, West Nile Experiment WCT001

The purpose of this experiment was to evaluate the host response to wild-type West Nile virus (WNV-NY99 382) and mutant WNV-E218A (WNV-NY99 382 E218A 2 nt) virus infection. Sample data was obtained from mouse cortex tissue for mRNA, miRNA, proteomics, lipidomics, and metabolomics expression analysis. Tissues from this experiment were matched to tissues from GSE77192 (WCB001), using 1/4 of the cortex and 1/2 of cerebellum from the same mice. Secondary host-associated viral dataset downloads contain one or more statistically processed (normalization data transformation) quantitative dataset collections resulting in qualitative expression analyses of primary host-pathogen experimental study designs. Leveraging unique high-resolution Omics capabilities for proteomics, metabolomics, lipidomics, and transcriptomics dataset downloads each have a direct relationship to a primary sample submission corresponding to a specific West Nile virus infection.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Omics-Lethal Human Viruses, West Nile Experiment WDC010

The purpose of this experiment was to evaluate the host response to wild-type West Nile virus (WNVMT) and mutant (WNVE218A) virus infection. Sample data was obtained from primary mouse myeloid dendritic cells for mRNA and proteomics expression analysis. See Experiment WDC011 (GSE75222) for corresponding independent biological replicate study. Secondary host-associated viral dataset downloads contain one or more statistically processed (normalization data transformation) quantitative dataset collections resulting in qualitative expression analyses of primary host-pathogen experimental study designs. Leveraging unique high-resolution Omics capabilities for proteomics and transcriptomics, each dataset download has a direct relationship to a primary sample submission corresponding to a specific West Nile virus infection.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Omics-Lethal Human Viruses, West Nile Experiment WDC011

The purpose of this experiment was to evaluate the host response to wild-type West Nile virus (WNVMT) and mutant (WNVE218A) virus infection. Sample data was obtained from primary mouse myeloid dendritic cells for mRNA expression analysis. See Experiment WDC010 (GSE74628) for corresponding independent biological replicate study. Secondary host-associated viral dataset downloads contain one or more statistically processed (normalization data transformation) quantitative dataset collections resulting in qualitative expression analyses of primary host-pathogen experimental study designs. Transcriptomics dataset downloads have a direct relationship to a primary sample submission corresponding to a specific West Nile virus infection.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Omics-Lethal Human Viruses, West Nile Experiment WGCN002

The purpose of this experiment was to evaluate the host response to wild-type West Nile virus infectious clone (WNV-NY99 clone 382) and mutant (WNVE218A) virus infection. Sample data was obtained from mouse granule cell neurons for mRNA and miRNA expression analysis. See Experiment WGCN003 for corresponding independent biological replicate study. Secondary host-associated viral dataset downloads contain one or more statistically processed (normalization data transformation) quantitative dataset collections resulting in qualitative expression analyses of primary host-pathogen experimental study designs. Transcriptomics dataset downloads have a direct relationship to a primary sample submission corresponding to a specific West Nile virus infection.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Omics-Lethal Human Viruses, West Nile Experiment WGCN003

The purpose of this experiment was to evaluate the host response to wild-type West Nile virus infectious clone (WNV-NY99 clone 382) and mutant (WNVE218A) virus infection. Sample data was obtained from mouse granule cell neurons for mRNA and miRNA expression analysis. See Experiment WGCN002 for corresponding independent biological replicate study. Secondary host-associated viral dataset downloads contain one or more statistically processed (normalization data transformation) quantitative dataset collections resulting in qualitative expression analyses of primary host-pathogen experimental study designs. Transcriptomics dataset downloads have a direct relationship to a primary sample submission corresponding to a specific West Nile virus infection.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Omics-Lethal Human Viruses, West Nile Experiment WLN002

The purpose of this experiment was to evaluate the host response to wild-type West Nile virus infectious clone (WNV-NY99 clone 382) and mutant WNV-E218A (WNV-NY99 382 E218A 2 nt) virus infection. Sample data was obtained from mouse popliteal draining lymph nodes for mRNA and miRNA expression analysis. See Experiment WLN003 for corresponding omics analysis. Secondary host-associated viral dataset downloads contain one or more statistically processed (normalization data transformation) quantitative dataset collections resulting in qualitative expression analyses of primary host-pathogen experimental study designs. Transcriptomics dataset downloads have a direct relationship to a primary sample submission corresponding to a specific West Nile virus infection.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

PNNL DataHub Project: Omics Lethal Human Viruses Project Profiling of the Host Response to West Nile Virus Infection, Processed Experimental Dataset Catalog

West Nile virus (WNV) is classified as a Category B priority pathogen (mosquito-borne Flavivirus) by the National Institute of Allergy and Infectious Diseases (NIAID), and are known to cause severe infections in humans where lethal host-associated mechanisms are not clearly defined. The NIAID Modeling Host Responses to Understand Severe Human Virus Infections Research Program project (2013 - 2018) aimed to develop an improved comprehensive understanding of the host response to a suite of viruses causing lethal infections leveraging a systems biology approach. The NIAID Modeling Host Responses to Understand Severe Human Virus Infections Research Program project (2013-2018) aimed to develop an improved comprehensive understanding of the host response to a suite of viruses causing lethal infections leveraging a systems biology approach. Herein, PNNL sub-projects provide a never before released comprehensive infectious disease collection of primary and secondary transformation multi-Omics data profiling a series of priority pathogen primary experimental studies for enhanced open-access to viral Omics datasets and project lifecycle metadata. Secondary host-pathogen viral dataset downloads contain one or more statistically processed (normalization data transformation) quantitative dataset collections resulting in qualitative expression analyses of primary host-pathogen experimental study designs. Leveraging unique high-resolution Omics capabilities for proteomics (P), metabolomics (M), lipidomics (L), and transcriptomics (T) dataset downloads each have a direct relationship to a primary sample submission corresponding a specific West Nile virus [NCBITAXON:11082] (WNV-NY99 382) experimental infection study. Host sample types include cerebellum ["CB", BTO:0000232], cortical neurons ["CN", BTO:0004102], cortex ["CT", BTO:0000233], dendritic cells ["DC", BTO:0002042], granule cell neurons ["GCN", BTO:0003393], lymph node ["LN", BTO:0000784], and serum ["SE", BTO:0001239] from mouse (Mus musculus) tissue collections.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2024

Global particle buildup simulations with gas puff scan: application to WEST discharge

This paper deals with the distribution of sources, transport, and exhaust of particles in a tokamak. Knowledge and understanding of all the physical phenomena involved in the global particle buildup are necessary to study and predict density regimes and subsequently to develop optimized scenarios for tokamak operation in order to control heat and particle exhaust. Neutral particles and their interactions with plasma are central in this perspective. This paper discusses the impact of varying the intensity of particle fueling in 2D transport simulations of a WEST discharge. Simulations are performed with an updated version of SOLEDGE-HDG that allows a more realistic transport of neutrals using a self-consistent diffusive model based on charge exchange and ionization processes. New code capabilities allow the entire WEST poloidal cross section to be simulated in a realistic configuration for both geometry and the range of control parameters. A gas puff scan illustrates the main features of the sheath-limited, high-recycling, and detached regimes, such as the buildup of the temperature gradient and the pressure drop in the scrape-off layer (SOL), the target temperature falling to 1 eV, and the ionization source moving away from the targets, as well as the particle flux rollover. A crude estimate of wall erosion is also provided, showing the respective role of each plasma wall component in each of these regimes.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2025

Performance Evaluation of Weather@home2 Simulations over West African Region

Weather and climate forecasting, using climate models, have become essential tools and life-savers in the West African region; in spite of the fact that climate models do not fully comply with attributes of forecast qualities—RASAP: reliability, association, skill, accuracy, and precision. The objective of this paper is to quantitatively evaluate, in comparison to CRU and ERA5 datasets, the RASAP compliance-level of the weather@home2 modeling system (w@h2). Findings from some statistical evaluations show that, to a moderately significant extent, w@h2 model provides useful information during the monsoon seasons; skills to capture the Little Dry Season over the Guinea zone; predictive skills for the onset season; ability to reproduce all the annual characteristics of the surface maximum air temperature over the region; as well as skill to detect heat waves that usually ravage West Africa during the boreal spring. The model displays traces of attributes that are needed for seasonal climate predictions and applications. Deficiencies in the quantitative reproducibility point to the facts that the model does provide a reliability akin to that of regional climate models. This paper further furnishes a prospective user with information on whether the model might be “useful or not” for a particular application.

West Africa↗
DOE OSTI2022

Bayesian time-varying occupancy model for West Nile virus in Ontario, Canada

Occupancy models determine the true presence or absence of a species by adjusting for imperfect detection in surveys. They often assume that species presences can be detected only if sites are occupied during a sampling season. We extended these models to estimate occupancy rates that vary throughout a sampling season as well as account for spatial dependence among sites. For these methods, we constructed a fast Gibbs sampler with the Pólya-Gamma augmentation strategy to conduct inference on covariate effects. We applied these methods to evaluate how environmental conditions and surveillance practices are associated with the presence of West Nile virus in mosquito traps across Ontario, Canada from 2002 to 2017. We found that urban land cover and warm temperatures drove viral occupancy, whereas viral testing on pools with higher proportions of Culex mosquitoes was more likely to result in a positive test for West Nile virus. Models with time-varying occupancy effects achieved much lower Watanabe-Akaike information criteria than models without such effects. Our final model had strong predictive performance on test data that included some of the most extreme seasons, demonstrating the promise of these methods in the study of pathogens spread by mosquito vectors.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2024

Survey of tungsten gross erosion from main plasma facing components in WEST during a L-mode high fluence campaign

An initial high fluence campaign was performed in WEST, in 2023, on the newly installed actively cooled tungsten divertor composed of ITER-grade monoblocks. The campaign consisted in the repetition of a 60 s long Deuterium L-mode pulse in attached divertor conditions, cumulating over 10000s of plasma exposure. A maximum deuterium fluence of approximately 5⋅1⁢026 m−2 was reached in the outer strike point region, representative of a few high performance ITER pulses. Gross tungsten erosion inferred from visible spectroscopy shows that the most eroded plasma facing component is the inner divertor target with rates ten times larger than on the outer divertor target. The outer midplane tungsten bumpers, located a few centimeters from the plasma, show gross erosion rates two times lower than at the outer divertor. We conclude that the outer midplane bumpers have a negligible contribution to the long range tungsten migration and deposition onto the lower divertor. The cumulated gross erosion rate on the inner divertor translates in an effective gross erosion thickness of about 20μ⁢m, while it is about 2μ⁢m for the outer divertor. Strikingly, these orderings coincide with the thickness of deposits found locally on the divertor: the exposed surfaces of high field side monoblocks are covered with several tens of μ⁢m tungsten deposits, while on the lower field side, few μ⁢m thin tungsten deposits are only found on the magnetically shadowed parts of monoblocks. The strong impact of those deposits on WEST operation, namely perturbation of surface temperature measurement with infra-red thermography, and the emission of flakes causing radiative perturbation of the confined plasma, calls for anticipating similar issues in ITER. In particular, the start of research operation shall consider the definition of a divertor erosion budget in order to anticipate the formation of deleterious deposits.

Fedorczak, N.↗
DOE OSTI2023

Public perceptions of wave energy development on the west coast of North America: Risks, benefits, and coastal attachment

While solar and wind energy continue to grow as significant sources of renewable energy, a global energy transition away from fossil fuels will require an expanding portfolio of generating resources. Marine renewable energy has the potential to contribute greatly in the coming decades, as the more predictable nature of wave energy can support the resiliency of the power grid and complement solar and inland wind generation. Yet, the broad deployment of marine energy technologies like wave energy will depend on public support, making it critical to identify the relevant factors associated with public attitudes and risk/benefit perceptions. This paper draws on social representations theory to specifically examine perceptions of wave energy on the west coast of North America, a site chosen because of the high suitability for wave energy generation and the fact that one of only three wave energy test sites in the world is under development off the coast of Oregon. Using an online survey in June 2020, we recruited a sample of 2000 respondents from California, Oregon, Washington, and British Columbia. We found a majority of respondents held positive attitudes to wave energy, but respondents also had low familiarity – with a quarter of respondents lacking sufficient information to form an opinion. We used logistic regression to identify factors correlated with wave energy attitudes, finding that respondents who were more supportive of wind and solar energy, more optimistic about new technology, and reported more familiarity with wave energy were significantly more likely to have a positive impression of wave energy. Respondents with higher levels of place attachment to coastal areas were more split, as they perceived higher benefits of wave energy – but also higher risks. Our results indicate broad appeal of wave energy on the west coast, but we caution policymakers and developers to not take initial siting processes for granted. As experience has shown for offshore wind, broad appeal does not guarantee a smooth siting process in a local context. Furthermore, the role of place attachment to coastal areas must be taken seriously or risk alienating local communities.

16 TIDAL AND WAVE POWER↗
DOE OSTI2024

Climate change is intensifying rainfall erosivity and soil erosion in West Africa

Soil erosion is a critical environmental challenge with significant implications for agriculture, water quality, and ecosystem stability. Understanding its dynamics is essential for sustainable environmental management and societal welfare. Here, we analyze rainfall erosivity and erosion patterns across West Africa (WAF) during the historical (1982–2014), near future (2028–2060), and far future (2068–2100) periods under Shared Socioeconomic Pathways (SSPs 370 and 585). Using bias-corrected-downscaled (BCD) climate models validated against reference data, we ensure an accurate representation of rainfall—a key driver of erosivity (R-factor) and soil erosion. We compare Renard's approach and the Modified Fournier Index (MFI) to calculate the R-factor and note a strong correlation. However, Renard's method shows slightly lower accuracy in Sierra Leone, Guinea, and The Gambia, likely due to its inability to capture high-intensity, short-duration rainfall events. In contrast, the MFI, utilizing continuous rain gauge data, proves more reliable for these regions. We also attribute fluctuations in erosivity, such as those seen during the 2003 West Africa floods, to synoptic weather patterns influenced by multiple climate processes. Furthermore, our analysis reveals regions where future soil erosion could exceed 20 t/ha/yr due to climate change. Under the SSP 370 scenario, soil erosion in WAF is projected to rise by 14.84 % in the near future and 18.65 % in the far future, increasing further under SSP 585 to 19.86 % and 23.49 %, respectively. The most severe increases are expected in Benin and Nigeria, with Nigeria potentially facing a 66.41 % rise in erosion by the far future under SSP 585. These findings highlight the region's exposure to intensified climatic conditions and underscore the urgent need for targeted soil management and climate adaptation strategies to mitigate erosion's ecological and socioeconomic impacts.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2019

Projected Changes to Extreme Precipitation Along North American West Coast From the CESM Large Ensemble

Precipitation events along the North American (NA) west coast are strongly modulated by atmospheric rivers, yet the mechanisms of their influences on the probability distributions of precipitation events are not well studied. Simulations from the Community Earth System Model (CESM) large ensemble under global warming are investigated using a moisture budget conditioned onto precipitation events for the recurrence intervals ranging from 0.1 to 50 years. In the midlatitudes, the increases in precipitation intensity and accumulation for all events over the NA west coast are predominantly controlled by moisture increases. In contrast, changes in the subtropical precipitation distributions in southwestern NA are associated with moisture increases and duration decreases for all events, with additional dynamical amplification for the heaviest precipitation events. These interpretations from the conditional moisture budget are more consistent with future projection of atmospheric rivers than the conventional mean and transient decomposition of the moisture budget.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2020

Response of Landfalling Atmospheric Rivers on the U.S. West Coast to Local Sea Surface Temperature Perturbations

Atmospheric rivers (ARs) play a crucial role in the hydroclimate of the U.S. west coast. While the impact of large-scale sea surface temperature (SST) patterns on ARs is well recognized, the specific roles of local SST on ARs have not been systematically investigated. Here, we analyzed the landfalling ARs from two regional climate simulations that differ only in the local SST. With local SST warming, AR frequency increases across the U.S. west coast, with comparable contributions from the spatial expansion of ARs and emergence of new ARs. AR landfalling area, inland intrusion distance, and intensity also increase, with landfalling area showing the largest sensitivity. Although local SST warming only increases the AR moisture by ~0.4%/K, AR-related precipitation increases by 3%/K, demonstrating the important impact of local SST warming on intensifying storms. Hence, local SST is important for accurate depiction of ARs and their precipitation in the western United States.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

Stability analysis of WEST L-mode discharges with improved confinement from boron powder injection

WEST L-mode plasmas with dominant electron heating and no core torque source have observed improvements in confinement during boron (B) powder injection. These results are reminiscent of previous powder injection experiments on other devices and gaseous impurity seeding experiments on WEST. During powder injection, the stored energy increased up to 25% due to enhanced ion and electron heat and particle confinement. The improvements in confinement were not indicative of an L-H transition. To identify the dominant mechanisms and the causality chain behind these improvements in confinement, we employ interpretative modeling using METIS, predictive integrated modeling using a high-fidelity plasma simulator (HFPS), and stand-alone gyrokinetic simulations using quasi-linear gyrokinetic code. Interpretative modeling with METIS allowed for the estimation of missing data while maintaining good overall consistency with experiment. These results provided the initial conditions for fully predictive flux driven simulations using the HFPS. From these simulations, quasi-linear gyrokinetic analysis was performed at ρ = 0.5 and ρ = 0.65. Collisionality was found to be a strong candidate for the turbulence suppression mechanism at ρ = 0.5, while a combination of collisionality and the T e /T i ratio was found to be the likely mechanism at ρ = 0.65. The results additionally suggested that increased Z eff (through main ion dilution) could play a role in the improved confinement, but this could not be confirmed due to a lack of experimental measurements. The modeling framework established here can now be used to evaluate and exploit a variety of future powder injection experiments.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2022

Developing high performance RF heating scenarios on the WEST tokamak

High power experiments, up to 9.2 MW with LHCD and ICRH, have been carried out in the full tungsten tokamak WEST. Here, quasi non inductive discharges have been achieved allowing to extend the plasma duration to 53 s with stationary conditions in particular with respect to tungsten contamination. Transitions to H mode are observed, and H-modes lasting up to 4 s have been obtained. The increase in stored energy is weak since the power crossing the separatrix is close to the L–H threshold. Hot L mode plasmas (central temperature exceeding 3 keV) with a confinement time following the ITER L96 scaling law are routinely obtained. The weak aspect ratio dependence of this scaling law is confirmed. Tungsten accumulation is generally not an operational issue on WEST. Difficulty of burning through tungsten can prevent the discharge from accessing to a hot core plasma in the ramp-up phase, or can lead to rapid collapse of the central temperature when radiation is enhanced by a slight decrease of the temperature. Except a few pulses post-boronization, the plasma radiation is rather high (P rad /P tot ~ 50%) and is dominated by tungsten. This fraction does not vary as the RF power is ramped up and is quite similar in ICRH and/or LHCD heated plasmas. An estimate of the contribution of the RF antennas to the plasma contamination in tungsten is given.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗