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At least 847 records · Page 47

Validation for 2D/3D registration I: A new gold standard data set

Purpose: In this article, the authors propose a new gold standard data set for the validation of two-dimensional/three-dimensional (2D/3D) and 3D/3D image registration algorithms. Methods: A gold standard data set was produced using a fresh cadaver pig head with attached fiducial markers. The authors used several imaging modalities common in diagnostic imaging or radiotherapy, which include 64-slice computed tomography (CT), magnetic resonance imaging using Tl, T2, and proton density sequences, and cone beam CT imaging data. Radiographic data were acquired using kilovoltage and megavoltage imaging techniques. The image information reflects both anatomy and reliable fiducial marker information and improves over existing data sets by the level of anatomical detail, image data quality, and soft-tissue content. The markers on the 3D and 2D image data were segmented using ANALYZE 10.0 (AnalyzeDirect, Inc., Kansas City, KN) and an in-house software. Results: The projection distance errors and the expected target registration errors over all the image data sets were found to be less than 2.71 and 1.88 mm, respectively. Conclusions: The gold standard data set, obtained with state-of-the-art imaging technology, has the potential to improve the validation of 2D/3D and 3D/3D registration algorithms for image guided therapy.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

SU-E-T-93: Creation of Standardized APBI SAVI Cavities Using CT Registration

Purpose: Develop a consistent and rapid method of generating the initial cavity structure for Accelerated Partial Breast Irradiation (APBI) using the SAVI applicator. Methods: Four SAVI (Cianna Medical) applicators (6-1 Mini, 6-1, 8-1, and 10-1) were scanned on a CT simulator. The applicators were scanned in air with the CT slices (0.625mm axial thickness) perpendicular to the long axis of the applicator. Following scanning the CT images were transferred to Eclipse (Varian Medical Systems) and contours of the cavity were drawn. The cavity proximal and distal locations were defined according to MD specification. The scans and contours were then re-imported into the CT virtual simulation workstation.At the time of patient planning the appropriate applicator scan is anonymized and imported into Eclipse. In Brachytherapy Planning two Marker points are placed, one at the distal band location (cavity start) and the second at a defined distance along the applicator (cavity end). The actual patient scan is then registered to the applicator scan. A three point match is used to quickly get the two scans in approximate alignment. Manually matching is then used to fine tune the alignment of the cavity contour and Marker points. Results: The standard applicator scans have shown to agree well with the applicators in the patient scans. The time taken to register the scans has shown to be less than generating the cavities using the standard methods of contouring on the axial slices or using the dose shaper with sources in the central channel. Conclusion: The registration of a standard applicator scan and contour has improved the consistency in the generation of the initial cavity (SAVI) structure. Planning structures used for dose calculation are created with that structure as a starting point so accuracy and consistency are important for dose evaluation and plan comparison.

60 APPLIED LIFE SCIENCES↗

SU-E-P-22: AAPM Task Group 263 Tackling Standardization of Nomenclature for Radiation Therapy

Purpose: There is growing recognition of need for increased clarity and consistency in the nomenclatures used for body and organ structures, DVH metrics, toxicity, dose and volume units, etc. Standardization has multiple benefits; e.g. facilitating data collection for clinical trials, enabling the pooling of data between institutions, making transfers (i.e. hand-offs) between centers safer, and enabling vendors to define “default” settings. Towards this goal, the American Association of Physicists in Medicine (AAPM) formed a task group (TG263) in July of 2014, operating under the Work Group on Clinical Trials to develop consensus statements. Guiding principles derived from the investigation and example nomenclatures will be presented for public feedback. Methods: We formed a multi-institutional and multi-vendor collaborative group of 39 physicists, physicians and others involved in clinical use and electronic transfer of information. Members include individuals from IROC, NRG, IHE-RO, DICOM WG-7, ASTRO and EORTC groups with overlapping interests to maximize the quality of the consensus and increase the likelihood of adoption. Surveys of group and NRG members were used to define current nomenclatures and requirements. Technical requirements of vendor systems and the proposed DICOM standards were examined. Results: There is a marked degree of inter and intra institutional variation in current approaches, resulting from inter-vendor differences in capabilities, clinic specific conceptualizations and inconsistencies. Using a consensus approach, the group defined optimal formats for the naming of targets and normal structures. A formal objective assessment of 13 existing clinically-used software packages show that all had capabilities to accommodate these recommended nomenclatures. Conclusions: A multi-stakeholder effort is making significant steps forward in developing a standard nomenclature that will work across platforms. Our current working list includes > 550 structures. Outreach efforts are ongoing to ensure broader participation in evaluating and testing the principles as they are developed by TG263.

60 APPLIED LIFE SCIENCES↗

MO-D-BRD-04: NIST Air-Kerma Standard for Electronic Brachytherapy Calibrations

Electronic brachytherapy (eBT) has seen an insurgence of manufacturers entering the US market for use in radiation therapy. In addition to the established interstitial, intraluminary, and intracavitary applications of eBT, many centers are now using eBT to treat skin lesions. It is important for medical physicists working with electronic brachytherapy sources to understand the basic physics principles of the sources themselves as well as the variety of applications for which they are being used. The calibration of the sources is different from vendor to vendor and the traceability of calibrations has evolved as new sources came to market. In 2014, a new air-kerma based standard was introduced by the National Institute of Standards and Technology (NIST) to measure the output of an eBT source. Eventually commercial treatment planning systems should accommodate this new standard and provide NIST traceability to the end user. The calibration and commissioning of an eBT system is unique to its application and typically entails a list of procedural recommendations by the manufacturer. Commissioning measurements are performed using a variety of methods, some of which are modifications of existing AAPM Task Group protocols. A medical physicist should be familiar with the different AAPM Task Group recommendations for applicability to eBT and how to properly adapt them to their needs. In addition to the physical characteristics of an eBT source, the photon energy is substantially lower than from HDR Ir-192 sources. Consequently, tissue-specific dosimetry and radiobiological considerations are necessary when comparing these brachytherapy modalities and when making clinical decisions as a radiation therapy team. In this session, the physical characteristics and calibration methodologies of eBt sources will be presented as well as radiobiology considerations and other important clinical considerations. Learning Objectives: To understand the basic principles of electronic brachytherapy and the various applications for which it is being used. To understand the physics of the calibration and commissioning for electronic brachytherapy sources To understand the unique radiobiology and clinical implementation of electronic brachytherapy systems for skin and IORT techniques Xoft, Inc. contributed funding toward development of the NIST electronic brachytherapy facility (Michael Mitch).The University of Wisconsin (Wesley Culberson) has received research support funding from Xoft, Inc. Zoubir Ouhib has received partial funding from Elekta Esteya.

60 APPLIED LIFE SCIENCES↗

A standardized quantitative analysis strategy for stable isotope probing metagenomics

ABSTRACT Stable isotope probing (SIP) facilitates culture-independent identification of active microbial populations within complex ecosystems through isotopic enrichment of nucleic acids. Many DNA-SIP studies rely on 16S rRNA gene sequences to identify active taxa, but connecting these sequences to specific bacterial genomes is often challenging. Here, we describe a standardized laboratory and analysis framework to quantify isotopic enrichment on a per-genome basis using shotgun metagenomics instead of 16S rRNA gene sequencing. To develop this framework, we explored various sample processing and analysis approaches using a designed microbiome where the identity of labeled genomes and their level of isotopic enrichment were experimentally controlled. With this ground truth dataset, we empirically assessed the accuracy of different analytical models for identifying active taxa and examined how sequencing depth impacts the detection of isotopically labeled genomes. We also demonstrate that using synthetic DNA internal standards to measure absolute genome abundances in SIP density fractions improves estimates of isotopic enrichment. In addition, our study illustrates the utility of internal standards to reveal anomalies in sample handling that could negatively impact SIP metagenomic analyses if left undetected. Finally, we present SIPmg , an R package to facilitate the estimation of absolute abundances and perform statistical analyses for identifying labeled genomes within SIP metagenomic data. This experimentally validated analysis framework strengthens the foundation of DNA-SIP metagenomics as a tool for accurately measuring the in situ activity of environmental microbial populations and assessing their genomic potential. IMPORTANCE Answering the questions, “who is eating what?” and “who is active?” within complex microbial communities is paramount for our ability to model, predict, and modulate microbiomes for improved human and planetary health. These questions can be pursued using stable isotope probing to track the incorporation of labeled compounds into cellular DNA during microbial growth. However, with traditional stable isotope methods, it is challenging to establish links between an active microorganism’s taxonomic identity and genome composition while providing quantitative estimates of the microorganism’s isotope incorporation rate. Here, we report an experimental and analytical workflow that lays the foundation for improved detection of metabolically active microorganisms and better quantitative estimates of genome-resolved isotope incorporation, which can be used to further refine ecosystem-scale models for carbon and nutrient fluxes within microbiomes.

54 ENVIRONMENTAL SCIENCES↗

A Conjecture on Deducing General Relativity and the Standard Model with Its Fundamental Constants from Rational Tangles of Strands

It appears possible to deduce black holes, general relativity and the standard model of elementary particles from one-dimensional strands that fluctuate at the Planck scale. This appears possible as long as only switches of skew strand crossings are observable, but not the strands themselves. Woven fluctuating strands behave like horizons and imply black hole entropy, the field equations of general relativity and cosmological observations. Tangled fluctuating strands in flat space imply Dirac’s equation. The possible families of unknotted rational tangles produce the spectrum of elementary particles. Fluctuating rational tangles also yield the gauge groups U(1), broken SU(2), and SU(3), produce all Feynman diagrams of the standard model, and exclude any unknown elementary particle, gauge group, and Feynman diagram. The conjecture agrees with all known experimental data. Predictions for experiments arise, and the fundamental constants of the standard model can be calculated. Objections are discussed. Predictions and calculations allow testing the conjecture. As an example, an ab initio estimate of the fine structure constant is outlined.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Conversations and deliberations: Non-standard cosmological epochs and expansion histories

Here, this paper summarizes the discussions which took place during the PITT-PACC Workshop entitled “Non-Standard Cosmological Epochs and Expansion Histories,” held in Pittsburgh, Pennsylvania, Sept. 5–7, 2024. Much like the non-standard cosmological epochs that were the subject of these discussions, the format of this workshop was also non-standard. Rather than consisting of a series of talks from participants, with each person presenting their own work, this workshop was instead organized around free-form discussion blocks, with each centered on a different overall theme and guided by a different set of Discussion Leaders. This document is not intended to serve as a comprehensive review of these topics, but rather as an informal record of the discussions that took place during the workshop, in the hope that the content and free-flowing spirit of these discussions may inspire new ideas and research directions.

cosmology↗

Templates for developing and versioning data standards and reporting formats using GitHub

This data package contains three templates that can be used for creating README files and Issue Templates, written in the markdown language, that support community-led data reporting formats. We created these templates based on the results of a systematic review (see related references) that explored how groups developing data standard documentation use the Version Control platform GitHub, to collaborate on supporting documents. Based on our review of 32 GitHub repositories, we make recommendations for the content of README Files (e.g., provide a user license, indicate how users can contribute) and so 'README_template.md' includes headings for each section. The two issue templates we include ('issue_template_for_all_other_changes.md' and 'issue_template_for_documentation_change.md') can be used in a GitHub repository to help structure user-submitted issues, or can be modified to suit the needs of data standard developers. We used these templates when establishing ESS-DIVE's community space on GitHub (https://github.com/ess-dive-community) that includes documentation for community-led data reporting formats. We also include file-level metadata 'flmd.csv' that describes the contents of each file within this data package. Lastly, the temporal range that we indicate in our metadata is the time range during which we searched for data standards documented on GitHub.

54 ENVIRONMENTAL SCIENCES↗

Data from: "A guide to using GitHub for developing and versioning data standards and reporting formats"

These data are the results of a systematic review that investigated how data standards and reporting formats are documented on the version control platform GitHub. Our systematic review identified 32 data standards in earth science, environmental science, and ecology that use GitHub for version control of data standard documents. In our analysis, we characterized the documents and content within each of the 32 GitHub repositories to identify common practices for groups that version control their documents on GitHub.In this data package, there are 8 CSV files that contain data that we characterized from each repository, according to the location within the repository. For example, in 'readme_pages.csv' we characterize the content that appears across the 32 GitHub repositories included in our systematic review. Each of the 8 CSV files has an associated data dictionary file (names appended with '_dd.csv' and here we describe each content category within CSV files.There is one file-level metadata file (flmd.csv) that provides a description of each file within the data package.

54 ENVIRONMENTAL SCIENCES↗

A Search for the Standard Model Higgs Boson Produced in Association with a $W$ Boson

We present a search for a standard model Higgs boson produced in association with a W boson using data collected with the CDF II detector from p$\bar{p}$ collisions at √s = 1.96 TeV. The search is performed in the WH → ℓvb$\bar{b}$ channel. The two quarks usually fragment into two jets, but sometimes a third jet can be produced via gluon radiation, so we have increased the standard two-jet sample by including events that contain three jets. We reconstruct the Higgs boson using two or three jets depending on the kinematics of the event. We find an improvement in our search sensitivity using the larger sample together with this multijet reconstruction technique. Our data show no evidence of a Higgs boson, so we set 95% confidence level upper limits on the WH production rate. We set limits between 3.36 and 28.7 times the standard model prediction for Higgs boson masses ranging from 100 to 150 GeV/c 2 .

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

LLNL Fire Protection Engineering Standard 5.8 Facility Survey Program (Rev.5)

This standard describes the LLNL Fire Protection Facility Survey Program. The purpose of this standard is to describe the type of facility surveys required to fulfill the requirements of DOE Order 420.1B, Facility Safety. Nothing in this standard is intended to prevent the development of a FHA using alternative approaches. Alternate approaches, including formatting, will be by exception only, and approved by the Fire Marshal/Fire Protection Engineering Subject Matter Expert in advance of their use.

99 GENERAL AND MISCELLANEOUS↗

National Emission Standards for Hazardous Air Pollutants—Calendar Year 2011 INL Report for Radionuclides (2012)

This report documents the calendar year 2011 radionuclide air emissions and resulting effective dose equivalent to the maximally exposed individual member of the public from operations at the Department of Energy's Idaho National Laboratory Site. This report was prepared in accordance with the Code of Federal Regulations, Title 40, 'Protection of the Environment,' Part 61, 'National Emission Standards for Hazardous Air Pollutants,' Subpart H, 'National Emission Standards for Emissions of Radionuclides Other than Radon from Department of Energy Facilities.' The effective dose equivalent to the maximally exposed individual member of the public was 4.58E-02 mrem per year, 0.46 percent of the 10 mrem standard.

99 GENERAL AND MISCELLANEOUS↗

Effect of Energy Efficiency Standards on Natural Gas Prices

A primary justification for the establishment of energy efficiency standards for home appliances is the existence of information deficiencies and externalities in the market for appliances. For example, when a long-term homeowner purchases a new gas-fired water heater, she will maximize the value of her purchase by comparing the life-cycle cost of ownership of available units, including both total installed cost - purchase price plus installation costs - and operating cost in the calculus. Choice of the appliance with the lowest life-cycle costs leads to the most economically efficient balance between capital cost and fuel cost. However, if the purchaser's expected period of ownership is shorter than the useful life of the appliance, or the purchaser does not pay for the fuel used by the appliance, as is often the case with rental property, fuel cost will be external to her costs, biasing her decision toward spending less on fuel efficiency and resulting in the purchase of an appliance with greater than optimal fuel usage. By imposing an efficiency standard on appliances, less efficient appliances are made unavailable, precluding less efficient purchases and reducing fuel usage. The reduction in fuel demanded by residential users affects the total demand for such fuels as natural gas, for example. Reduced demand implies that residential customers are willing to purchase less gas at each price level. That is, the demand curve, labeled D 0 in Figure 1, shifts to the left to D 1 . If there is no change in the supply function, the supply curve will intersect the demand curve at a lower price. Residential demand is only one component of the total demand for natural gas. It is possible that total demand will decline very little if demand in other sectors increases substantially in response to a decline in the price. If demand does decrease, modeling studies generally confirm the intuition that reductions in demand for natural gas will result in reductions in its price as seen at the wellhead (Wiser 2007). The magnitude of the effect on price relative to the demand reduction, and the mechanism through which it occurs, is less well established. This report attempts to quantify the potential effects of reduced demand for natural gas in the residential sector, in response to the implementation of an energy efficiency standard for water heaters.

03 NATURAL GAS↗

National Green Building Standard Analysis

DOE's Building America Program is a research and development program to improve the energy performance of new and existing homes. The ultimate goal of the Building America Program is to achieve examples of cost-effective, energy efficient solutions for all U.S. climate zones. Periodic maintenance of an ANSI standard by review of the entire document and action to revise or reaffirm it on aschedule not to exceed five years is required by ANSI. In compliance, a consensus group has once again been formed and the National Green Building Standard is currently being reviewed to comply with the periodic maintenance requirement of an ANSI standard.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

National Emission Standards for Hazardous Air Pollutants. Calendar Year 2012 INL Report for Radionuclides (2013)

This report documents the calendar year 2011 radionuclide air emissions and resulting effective dose equivalent to the maximally exposed individual member of the public from operations at the Department of Energy’s Idaho National Laboratory Site. This report was prepared in accordance with the Code of Federal Regulations, Title 40, ''Protection of the Environment,'' Part 61, ''National Emission Standards for Hazardous Air Pollutants,'' Subpart H, ''National Emission Standards for Emissions of Radionuclides Other than Radon from Department of Energy Facilities.'' The effective dose equivalent to the maximally exposed individual member of the public was 4.58E-02 mrem per year, 0.46 percent of the 10 mrem standard.

54 ENVIRONMENTAL SCIENCES↗

National Emission Standards for Hazardous Air Pollutants. Calendar Year 2013 INL Report for Radionuclides [2014]

This report documents the calendar year 2013 radionuclide air emissions and resulting effective dose equivalent to the maximally exposed individual member of the public from operations at the Department of Energy’s Idaho National Laboratory Site. This report was prepared in accordance with the Code of Federal Regulations, Title 40, ''Protection of the Environment,'' Part 61, ''National Emission Standards for Hazardous Air Pollutants,'' Subpart H, ''National Emission Standards for Emissions of Radionuclides Other than Radon from Department of Energy Facilities.'' The effective dose equivalent to the maximally exposed individual member of the public was 3.02 E-02 mrem per year, 0.30 percent of the 10 mrem standard.

54 ENVIRONMENTAL SCIENCES↗

Neutron Sources for Standard-Based Testing

The DHS TC Standards and the consensus ANSI Standards use 252 Cf as the neutron source for performance testing because its energy spectrum is similar to the 235 U and 239 Pu fission sources used in nuclear weapons. An emission rate of 20,000 ± 20% neutrons per second is used for testing of the radiological requirements both in the ANSI standards and the TCS. Determination of the accurate neutron emission rate of the test source is important for maintaining consistency and agreement between testing results obtained at different testing facilities. Several characteristics in the manufacture and the decay of the source need to be understood and accounted for in order to make an accurate measurement of the performance of the neutron detection instrument. Additionally, neutron response characteristics of the particular instrument need to be known and taken into account as well as neutron scattering in the testing environment.

07 ISOTOPE AND RADIATION SOURCES↗

National Green Building Standard Analysis

DOE's Building America Program is a research and development program to improve the energy performance of new and existing homes. The ultimate goal of the Building America Program is to achieve examples of cost-effective, energy efficient solutions for all U.S. climate zones. Periodic maintenance of an ANSI standard by review of the entire document and action to revise or reaffirm it on a schedule not to exceed five years is required by ANSI. In compliance, a consensus group has once again been formed and the National Green Building Standard is currently being reviewed to comply with the periodic maintenance requirement of an ANSI standard.

energy simulation method↗