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At least 109 records · Page 6

Artificial intelligence techniques for integrative structural biology of intrinsically disordered proteins

Here, we outline recent developments in artificial intelligence (AI) and machine learning (ML) techniques for integrative structural biology of intrinsically disordered proteins (IDP) ensembles. IDPs challenge the traditional protein structure-function paradigm by adapting their conformations in response to specific binding partners leading them to mediate diverse, and often complex cellular functions such as biological signaling, self-organization and compartmentalization. Obtaining mechanistic insights into their function can therefore be challenging for traditional structural determination techniques. Often, scientists have to rely on piecemeal evidence drawn from diverse experimental techniques to characterize their functional mechanisms. Multiscale simulations can help bridge critical knowledge gaps about IDP structure-function relationships - however, these techniques also face challenges in resolving emergent phenomena within IDP conformational ensembles. We posit that scalable statistical inference techniques can effectively integrate information gleaned from multiple experimental techniques as well as from simulations, thus providing access to atomistic details of these emergent phenomena.

59 BASIC BIOLOGICAL SCIENCES↗

Timing Calibration and Windowing Technique Comparison for Lightning Mapping Arrays

Abstract Since their introduction 22 years ago, lightning mapping arrays (LMA) have played a central role in the investigation of lightning physics. Even in recent years with the proliferation of digital interferometers and the introduction of the LOw Frequency ARray (LOFAR) radio telescope, LMAs still play an important role in lightning science. LMA networks use a simple windowing technique that records the highest pulse in either 80 μs or 10 μs fixed windows in order to apply a time‐of‐arrival location technique. In this work, we develop an LMA‐emulator that uses lightning data recorded by LOFAR to simulate an LMA, and we use it to test three new styles of pulse windowing. We show that they produce very similar results as the more traditional LMA windowing, implying that LMA lightning mapping results are relatively independent of windowing technique. In addition, each LMA station has its GPS‐conditioned clock. While the timing accuracy of GPS receivers has improved significantly over the years, they still significantly limit the timing measurements of the LMA. Recently, new time‐of‐arrival techniques have been introduced that can be used to self‐calibrate systematic offsets between different receiving stations. Applying this calibration technique to a set of data with 32 ns uncertainty, observed by the Colorado LMA, improves the timing uncertainty to 19 ns. This technique is not limited to LMAs and could be used to help calibrate future multi‐station lightning interferometers.

Hare, Brian M.↗

A Third Harmonic Voltage Injection Technique to Improve The Power Transmission Capacity

To facilitate the growing deployment of renewable energy sources and increasing load demand, it is imperative to increase the power transmission capacity of the existing transmission corridors. The available power uprating techniques are either costly, or require significant alteration to the existing system. Moreover, most of these techniques are suitable for long transmission lines. In light of these limitations, a third harmonic voltage injection based power uprating technique is proposed in this article. The proposed technique is economic, immune to line impedance unbalance, and is applicable for any length of transmission line. Most importantly, the technique needs very minimal modification in the existing system at the substation level. The efficacy of the proposed technique is validated through simulation and experiments.

Das, Anubrata↗

A Six-Phase Space Vector PWM Technique for Wide Bandgap Device-Based Three-Level Inverters

This article presents a space vector pulsewidth modulation (SVPWM) technique for wide bandgap (WBG) device-based three-level (3L) six-phase inverters. Implementation of the SVPWM techniques for any six-phase inverter is complex for its high number of possible voltage vectors. Different six-phase load configurations are also possible depending on the angle between two consecutive phases and neutral point connections. The implementation techniques change depending on the load configuration. Moreover, a common neutral point for all six phases leads to circulating currents. Capacitor voltage balancing is also needed for 3L inverters. Capacitor voltage balancing and addressing the circulating current problem further increases the implementation complexity. In this article, a generalized SVPWM technique is proposed for the six-phase 3L inverters that is implementable using two three-phase 3L SVPWM blocks. The SVPWM technique also ensures dc bus capacitor voltage balancing and minimizes circulating current. Here, the SVPWM technique is experimentally verified using a GaN-based 3L six-phase active neutral point clamped (ANPC) inverter prototype, and the results are presented in this article.

42 ENGINEERING↗

Image-Driven Hybrid Structural Analysis Based on Continuum Point Cloud Method with Boundary Capturing Technique

Conventional approaches for the structural health monitoring of infrastructures often rely on physical sensors or targets attached to structural members, which require considerable preparation, maintenance, and operational effort, including continuous on-site adjustments. This paper presents an image-driven hybrid structural analysis technique that combines digital image processing (DIP) and regression analysis with a continuum point cloud method (CPCM) built on a particle-based strong formulation. Polynomial regressions capture the boundary shape change due to the structural loading and precisely identify the edge and corner coordinates of the deformed structure. The captured edge profiles are transformed into essential boundary conditions. This allows the construction of a strongly formulated boundary value problem (BVP), classified as the Dirichlet problem. Capturing boundary conditions from the digital image is novel, although a similar approach was applied to the point cloud data. It was shown that the CPCM is more efficient in this hybrid simulation framework than the weak-form-based numerical schemes. Unlike the finite element method (FEM), it can avoid aligning boundary nodes with regression points. A three-point bending test of a rubber beam was simulated to validate the developed technique. The simulation results were benchmarked against numerical results by ANSYS and various relevant numerical schemes. The technique can effectively solve the Dirichlet-type BVP, yielding accurate deformation, stress, and strain values across the entire problem domain when employing a linear strain model and increasing the number of CPCM nodes. In addition, comparative analysis with conventional displacement tracking techniques verifies the developed technique’s robustness. The proposed technique effectively circumvents the inherent limitations of traditional monitoring methods resulting from the reliance on physical gauges or target markers so that a robust and non-contact solution for remote structural health monitoring in real-scale infrastructures can be provided, even in unfavorable experimental environments.

Chemistry↗

Mapping of terrain by computer clustering techniques using multispectral scanner data and using color aerial film

Two clustering techniques were used for terrain mapping by computer of test sites in Yellowstone National Park. One test was made with multispectral scanner data using a composite technique which consists of (1) a strictly sequential statistical clustering which is a sequential variance analysis, and (2) a generalized K-means clustering. In this composite technique, the output of (1) is a first approximation of the cluster centers. This is the input to (2) which consists of steps to improve the determination of cluster centers by iterative procedures. Another test was made using the three emulsion layers of color-infrared aerial film as a three-band spectrometer. Relative film densities were analyzed using a simple clustering technique in three-color space. Important advantages of the clustering technique over conventional supervised computer programs are (1) human intervention, preparation time, and manipulation of data are reduced, (2) the computer map, gives unbiased indication of where best to select the reference ground control data, (3) use of easy to obtain inexpensive film, and (4) the geometric distortions can be easily rectified by simple standard photogrammetric techniques.

Smedes, H. W.↗

Testing techniques for determining static mechanical properties of Pneumatic tires

Fore-aft, lateral, and vertical spring rates of model and full-scale pneumatic tires were evaluated by testing techniques generally employed by industry and various testing groups. The purpose of this experimental program was to investigate what effects the different testing techniques have on the measured values of these important static tire mechanical properties. The testing techniques included both incremental and continuous loadings applied at various rates over half, full, and repeated cycles. Of the three properties evaluated, the fore-aft stiffness was demonstrated to be the most affected by the different testing techniques used to obtain it. Appreciable differences in the fore-aft spring rates occurred using both the increment- and continuous-loading techniques; however, the most significant effect was attributed to variations in the size of the fore-aft force loop. The dependence of lateral stiffness values on testing techniques followed the same trends as that for fore-aft stiffness, except to a lesser degree. Vertical stiffness values were found to be nearly independent of testing procedures if the nonlinear portion of the vertical force-deflection curves is avoided.

Dodge, R. N.↗

Application of multivariable search techniques to the optimization of airfoils in a low speed nonlinear inviscid flow field

Multivariable search techniques are applied to a particular class of airfoil optimization problems. These are the maximization of lift and the minimization of disturbance pressure magnitude in an inviscid nonlinear flow field. A variety of multivariable search techniques contained in an existing nonlinear optimization code, AESOP, are applied to this design problem. These techniques include elementary single parameter perturbation methods, organized search such as steepest-descent, quadratic, and Davidon methods, randomized procedures, and a generalized search acceleration technique. Airfoil design variables are seven in number and define perturbations to the profile of an existing NACA airfoil. The relative efficiency of the techniques are compared. It is shown that elementary one parameter at a time and random techniques compare favorably with organized searches in the class of problems considered. It is also shown that significant reductions in disturbance pressure magnitude can be made while retaining reasonable lift coefficient values at low free stream Mach numbers.

Hague, D. S.↗

Study of synthesis techniques for insensitive aircraft control systems

Insensitive flight control system design criteria was defined in terms of maximizing performance (handling qualities, RMS gust response, transient response, stability margins) over a defined parameter range. Wing load alleviation for the C-5A was chosen as a design problem. The C-5A model was a 79-state, two-control structure with uncertainties assumed to exist in dynamic pressure, structural damping and frequency, and the stability derivative, M sub w. Five new techniques (mismatch estimation, uncertainty weighting, finite dimensional inverse, maximum difficulty, dual Lyapunov) were developed. Six existing techniques (additive noise, minimax, multiplant, sensitivity vector augmentation, state dependent noise, residualization) and the mismatch estimation and uncertainty weighting techniques were synthesized and evaluated on the design example. Evaluation and comparison of these six techniques indicated that the minimax and the uncertainty weighting techniques were superior to the other six, and of these two, uncertainty weighting has lower computational requirements. Techniques based on the three remaining new concepts appear promising and are recommended for further research.

Harvey, C. A.↗

Digital techniques for ULF wave polarization analysis

Digital power spectral and wave polarization analysis are powerful techniques for studying ULF waves in the earth's magnetosphere. Four different techniques for using the spectral matrix to perform such an analysis have been presented in the literature. Three of these techniques are similar in that they require transformation of the spectral matrix to the principal axis system prior to performing the polarization analysis. The differences in the three techniques lie in the manner in which determine this transformation. A comparative study of these three techniques using both simulated and real data has shown them to be approximately equal in quality of performance. The fourth technique does not require transformation of the spectral matrix. Rather, it uses the measured spectral matrix and state vectors for a desired wave type to design a polarization detector function in the frequency domain. The design of various detector functions and their application to both simulated and real data will be presented.

Arthur, C. W.↗

A sensitivity/intrusion comparison of mental workload estimation techniques using a flight task emphasizing perceptual piloting activities

In a literature review it was found that little research effort has been directly applied to the problem of specifying a viable workload estimation technique for a given pilot/aircrew problem. Furthermore, the relative sensitivity and intrusion of most techniques has not been studied. The present investigation is concerned with a comparative evaluation of eight workload estimation techniques under identical experimental conditions in a flight simulator. The objective of this comparison was to determine the relative sensitivity and intrusion of each estimation technique in applications to a piloting situation which emphasizes the use of perceptual processes. No differential intrusion could be observed, but six of the eight techniques did show sensitivity to changes in perceptual load. All significant techniques displayed monotonic increases in measured values across the three loading levels considered.

Casali, J. G.↗

Interactive algebraic grid-generation technique

An algebraic grid generation technique and use of an associated interactive computer program are described. The technique, called the two boundary technique, is based on Hermite cubic interpolation between two fixed, nonintersecting boundaries. The boundaries are referred to as the bottom and top, and they are defined by two ordered sets of points. Left and right side boundaries which intersect the bottom and top boundaries may also be specified by two ordered sets of points. when side boundaries are specified, linear blending functions are used to conform interior interpolation to the side boundaries. Spacing between physical grid coordinates is determined as a function of boundary data and uniformly space computational coordinates. Control functions relating computational coordinates to parametric intermediate variables that affect the distance between grid points are embedded in the interpolation formulas. A versatile control function technique with smooth-cubic-spline functions is presented. The technique works best in an interactive graphics environment where computational displays and user responses are quickly exchanged. An interactive computer program based on the technique and called TBGG (two boundary grid generation) is also described.

Smith, R. E.↗

Finite-volume and integral-equation techniques for transonic and supersonic vortex-dominated flows

Two computational techniques are developed to calculate the compressible vortex-dominated flows. The first technique is a finite-volume Euler Solver which uses four-Stage Runge-Kutta time stepping with second- and fourth-order dissipation terms. The technique is applied to supersonic conical and three-dimensional flows about sharp- and round-edged delta wings. Attached and separated-flow solutions have been obtained depending on the values of damping coefficients. The second technique is an integral-equation solver of the full potential equation which uses a volume-integral term in addition to the classical surface-integral terms. The technique is applied to transonic three-dimensional flows about sharp-edged delta wings. A hybrid technique which combines the finite-volume and the integral-equation solvers is also presented.

Kandil, O. A.↗

Optimum coding techniques for MST radars

The optimum coding technique for MST (mesosphere stratosphere troposphere) radars is that which gives the lowest possible sidelobes in practice and can be implemented without too much computing power. Coding techniques are described in Farley (1985). A technique mentioned briefly there but not fully developed and not in general use is discussed here. This is decoding by means of a filter which is not matched to the transmitted waveform, in order to reduce sidelobes below the level obtained with a matched filter. This is the first part of the technique discussed here; the second part consists of measuring the transmitted waveform and using it as the basis for the decoding filter, thus reducing errors due to imperfections in the transmitter. There are two limitations to this technique. The first is a small loss in signal to noise ratio (SNR), which usually is not significant. The second problem is related to incomplete information received at the lowest ranges. An appendix shows a technique for handling this problem. Finally, it is shown that the use of complementary codes on transmission and nonmatched decoding gives the lowest possible sidelobe level and the minimum loss in SNR due to mismatch.

Sulzer, M. P.↗

Equivalent beam modeling using numerical reduction techniques

Numerical procedures that can accomplish model reductions for space trusses were developed. Three techniques are presented that can be implemented using current capabilities within NASTRAN. The proposed techniques accomplish their model reductions numerically through use of NASTRAN structural analyses and as such are termed numerical in contrast to the previously developed analytical techniques. Numerical procedures are developed that permit reductions of large truss models containing full modeling detail of the truss and its joints. Three techniques are presented that accomplish these model reductions with various levels of structural accuracy. These numerical techniques are designated as equivalent beam, truss element reduction, and post-assembly reduction methods. These techniques are discussed in detail.

Chapman, J. M.↗

Dual-pilot tone calibration technique

Pilot-based calibration techniques are used to reduce the effects of multipath fading in mobile satellite receivers. One of the more recent of these techniques, namely the tone calibration technique (TCT), suggests transmitting double sideband modulation with the pilot tone located at the center of its spectrum where the amplitude and phase characteristics of the channel are most stable. To 'make room' for the pilot in the presence of the Doppler shift, the equivalent low-pass data sidebands must be shaped so as to have zero response in the neighborhood of dc. Other techniques such as transparent tone-in-band (TTIB) similarly 'notch out' a hole in the center of the data spectrum for location of the pilot. An alternate possibility which is at the same time much more bandwidth efficient than TCT is a dual-pilot tone calibration technique (DPTCT) that symmetrically locates a pair of pilots outside the data spectrum near the band edges of the channel. The operation and performance of DPTCT are analyzed, and its effectiveness is compared to that of the single tone TCT technique.

Simon, Marvin K.↗

Preconditioned conjugate gradient technique for the analysis of symmetric anisotropic structures

An efficient preconditioned conjugate gradient (PCG) technique and a computational procedure are presented for the analysis of symmetric anisotropic structures. The technique is based on selecting the preconditioning matrix as the orthotropic part of the global stiffness matrix of the structure, with all the nonorthotropic terms set equal to zero. This particular choice of the preconditioning matrix results in reducing the size of the analysis model of the anisotropic structure to that of the corresponding orthotropic structure. The similarities between the proposed PCG technique and a reduction technique previously presented by the authors are identified and exploited to generate from the PCG technique direct measures for the sensitivity of the different response quantities to the nonorthotropic (anisotropic) material coefficients of the structure. The effectiveness of the PCG technique is demonstrated by means of a numerical example of an anisotropic cylindrical panel.

Noor, Ahmed K.↗

Construction of dynamic stochastic simulation models using knowledge-based techniques

Over the past three decades, computer-based simulation models have proven themselves to be cost-effective alternatives to the more structured deterministic methods of systems analysis. During this time, many techniques, tools and languages for constructing computer-based simulation models have been developed. More recently, advances in knowledge-based system technology have led many researchers to note the similarities between knowledge-based programming and simulation technologies and to investigate the potential application of knowledge-based programming techniques to simulation modeling. The integration of conventional simulation techniques with knowledge-based programming techniques is discussed to provide a development environment for constructing knowledge-based simulation models. A comparison of the techniques used in the construction of dynamic stochastic simulation models and those used in the construction of knowledge-based systems provides the requirements for the environment. This leads to the design and implementation of a knowledge-based simulation development environment. These techniques were used in the construction of several knowledge-based simulation models including the Advanced Launch System Model (ALSYM).

Williams, M. Douglas↗