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At least 1,225 records · Page 68

Bridging Scales in Bioenergy and Catalysis: A Review of Mesoscale Modeling Applications, Methods, and Future Directions

Between the molecular and reactor scales, which are familiar to the chemical engineering community, lies an intermediate regime, here termed the “mesoscale,” where transport phenomena and reaction kinetics compete on similar time scales. Bioenergy and catalytic processes offer particularly important examples of mesoscale phenomena owing to their multiphase nature and the complex, highly variable porosity characteristic of biomass and many structured catalysts. In this review, we overview applications and methods central to mesoscale modeling as they apply to reaction engineering of biomass conversion and catalytic processing. A brief historical perspective is offered to put recent advances in context. Applications of mesoscale modeling are described, and several specific examples from biomass pyrolysis and catalytic upgrading of bioderived intermediates are highlighted. Methods including reduced order modeling, finite element and finite volume approaches, geometry construction and import, and visualization of simulation results are described; in each category, recent advances, current limitations, and areas for future development are presented. Owing to improved access to high-performance computational resources, advances in algorithm development, and sustained interest in reaction engineering to sustainably meet societal needs, we conclude that a significant upsurge in mesoscale modeling capabilities is on the horizon that will accelerate design, deployment, and optimization of new bioenergy and catalytic technologies.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Distribution–Based Global Sensitivity Analysis in Hydrology

Global sensitivity analysis (GSA) is routinely used in academic setting to quantify the influence of input variability and uncertainty on predictions of a quantity of interest. Practical applications of GSA are hampered by its high computational cost, which arises from the need to run large (e.g., groundwater) models multiple times, and by its reliance on the analysis of variance, which formally requires input parameters to be uncorrelated. The former difficulty can be alleviated by replacing expensive models with inexpensive (e.g., polynomial) surrogates, while adoption of distribution-based (rather than variance-based) metrics can, in principle, overcome the latter but at significantly increased computational cost. To make use of distribution-based GSA feasible for regional-scale models with a large number of degrees of freedom, we supplement it with a surrogate model built with polynomial chaos expansions with analytically updated coefficients. Here, we demonstrate the computational efficiency of our algorithm on a case study dealing with evaluation of the effects of temperature variability on annual evapotranspiration at the regional scale.

42 ENGINEERING↗

Assessing Historical Variability of South Asian Monsoon Lows and Depressions With an Optimized Tracking Algorithm

Abstract Cyclonic low‐pressure systems (LPS) produce abundant rainfall in South Asia, where they are traditionally categorized as monsoon lows, monsoon depressions, and more intense cyclonic storms. The India Meteorological Department (IMD) has tracked monsoon depressions for over a century, finding a large decline in their number in recent decades, but their methods have changed over time and do not include monsoon lows. This study presents a fast, objective algorithm for identifying monsoon LPS and uses it to assess interannual variability and trends in reanalyses. Variables and thresholds used in the algorithm are selected to best match a subjectively analyzed LPS data set while minimizing disagreement between four reanalyses in a training period. The stream function of 850 hPa horizontal wind is found to be optimal in this sense; it is less noisy than vorticity and represents the complete nondivergent wind, even when flow is not geostrophic. Using this algorithm, LPS statistics are computed for five reanalyses, and none show a detectable trend in monsoon depression counts since 1979. Both the Japanese 55‐year Reanalysis (JRA‐55) and the IMD data set show a step‐like reduction in depression counts when they began using geostationary satellite data, in 1979 and 1982, respectively; the 1958–2018 linear trend in JRA‐55, however, is smaller than in the IMD data set, and its error bar includes 0. There are more LPS in seasons with above‐average monsoon rainfall and in La Niña years, but few other large‐scale modes of interannual variability are found to modulate LPS counts, lifetimes, or track length consistently across reanalyses.

54 ENVIRONMENTAL SCIENCES↗

Functional protein mining with conformal guarantees

Molecular structure prediction and homology detection offer promising paths to discovering protein function and evolutionary relationships. However, current approaches lack statistical reliability assurances, limiting their practical utility for selecting proteins for further experimental and in-silico characterization. To address this challenge, we introduce a statistically principled approach to protein search leveraging principles from conformal prediction, offering a framework that ensures statistical guarantees with user-specified risk and provides calibrated probabilities (rather than raw ML scores) for any protein search model. Our method (1) lets users select many biologically-relevant loss metrics (i.e. false discovery rate) and assigns reliable functional probabilities for annotating genes of unknown function; (2) achieves state-of-the-art performance in enzyme classification without training new models; and (3) robustly and rapidly pre-filters proteins for computationally intensive structural alignment algorithms. Our framework enhances the reliability of protein homology detection and enables the discovery of uncharacterized proteins with likely desirable functional properties.

59 BASIC BIOLOGICAL SCIENCES↗

Enabling real-time multi-messenger astrophysics discoveries with deep learning

Multi-messenger astrophysics is a fast-growing, interdisciplinary field that combines data, which vary in volume and speed of data processing, from many different instruments that probe the Universe using different cosmic messengers: electromagnetic waves, cosmic rays, gravitational waves and neutrinos. In this Expert Recommendation, we review the key challenges of real-time observations of gravitational wave sources and their electromagnetic and astroparticle counterparts, and make a number of recommendations to maximize their potential for scientific discovery. These recommendations refer to the design of scalable and computationally efficient machine learning algorithms; the cyber-infrastructure to numerically simulate astrophysical sources, and to process and interpret multi-messenger astrophysics data; the management of gravitational wave detections to trigger real-time alerts for electromagnetic and astroparticle follow-ups; a vision to harness future developments of machine learning and cyber-infrastructure resources to cope with the big-data requirements; and finally, the need to build a community of experts to realize the goals of multi-messenger astrophysics.

79 ASTRONOMY AND ASTROPHYSICS↗

Rapid data acquisition and machine learning-assisted composition design of functionally graded alloys via wire arc additive manufacturing

Abstract The lack of high-quality datasets in materials science hinders artificial intelligence (AI)-driven alloy design. To address this challenge, wire arc additive manufacturing (WAAM) was employed to fabricate graded alloys, generating extensive data for machine learning (ML)-assisted property prediction. ML models were developed using high-throughput experiments, computational models, and genetic algorithm to optimize feature selection, successfully predicting hardness and porosity. The ML model demonstrated its efficacy by designing a gradient alloy with enhanced properties. However, scaling up revealed uncertainties in tensile property and porosity due to differences in size and thermal conditions between the designed alloy build and the gradient print used to construct the ML model. This underscores the need for uncertainty quantification and process optimization in WAAM-driven alloy design. Our work advances AI-integrated additive manufacturing, offering a rapid approach to exploring process–structure–property relationships and accelerating materials development.

Wang, Xin↗

Powder diffraction and crystal structure prediction identify four new coumarin polymorphs

Coumarin, a simple, commodity chemical isolated from beans in 1820, has, to date, only yielded one solid state structure. Here, we report a rich polymorphism of coumarin grown from the melt. Four new metastable forms were identified and their crystal structures were solved using a combination of computational crystal structure prediction algorithms and X-ray powder diffraction. With five crystal structures, coumarin has become one of the few rigid molecules showing extensive polymorphism at ambient conditions. We demonstrate the crucial role of advanced electronic structure calculations including many-body dispersion effects for accurate ranking of the stability of coumarin polymorphs and the need to account for anharmonic vibrational contributions to their free energy. As such, coumarin is a model system for studying weak intermolecular interactions, crystallization mechanisms, and kinetic effects.

36 MATERIALS SCIENCE↗

Locally coupled open subsystems: A formalism for affordable electronic structure calculations featuring fractional charges and size consistency

This manuscript introduces a methodology (within the Born-Oppenheimer picture) to compute electronic ground-state properties of molecules and solids/surfaces with fractionally occupied components. Given a user-defined division of the molecule into subsystems, our theory uses an auxiliary global Hamiltonian that is defined as the sum of subsystem Hamiltonians, plus the spatial integral of a second-quantized local operator that allows the electrons to be transferred between subsystems. This electron transfer operator depends on a local potential that can be determined using density functional approximations and/or other techniques such as machine learning. The present framework employs superpositions of tensor-product wave functions, which can satisfy size consistency and avoid spurious fractional charges at large bond distances. The electronic population of each subsystem is in general a positive real number and is obtained from wave-function amplitudes, which are calculated by means of ground-state matrix diagonalization (or matrix propagation in the time-dependent case). Furthermore, our method can provide pathways to explore charge-transfer effects in environments where dividing the molecule into subsystems is convenient and to develop computationally affordable electronic structure algorithms.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Probing polarization dynamics at specific domain configurations: Computer-vision based automated experiment in piezoresponse force microscopy

Topological defects in ferroelectric materials have attracted much attention due to the emergence of conductive, ferroic, and magnetic functionalities. However, many topological configurations dynamically evolve during the switching processes, making them a challenge to characterize via traditional techniques. Here, we implement an automated experimentation approach for the exploration of functional properties in BiFeO 3 thin films. Specifically, we visualize the ferroelectric domain structures via single frequency piezoresponse force microscopy and implement a computer vision-based algorithm to discover features of interest at which spectroscopic measurements are taken. Subsequently, we employ dimensionality reduction techniques to reveal characteristic polarization behaviors at these features. This approach can be extended to other spectroscopies and modalities to probe only specific features of interest, ultimately enabling dynamical processes in ferroelectrics to be studied.

36 MATERIALS SCIENCE↗

Coupled Cluster Downfolding Methods: the effect of double commutator terms on the accuracy of ground-state energies

Downfolding coupled cluster (CC) techniques have recently been introduced into quantum chemistry as a tool for the dimensionality reduction of the many-body quantum problem. As opposed to earlier formulations in physics and chemistry based on the concept of effective Hamiltonians, the appearance of the downfolded Hamiltonians is a natural consequence of the single-reference exponential parametrization of the wave function. In this paper, we discuss the impact of higher-order terms originating in double commutators. In analogy to previous studies, we consider the case when only one- and two-body interactions are included in the downfolded Hamiltonians. We demonstrate the efficiency of the many-body expansions involving single and double commutators for the unitary extension of the downfolded Hamiltonians on the example of the beryllium atom, and bond-breaking processes in the Li2 and H2O molecules. For the H2O system, we also analyze energies obtained with downfolding procedures as functions of the active space size.

quantum computing, quantum algorithms, electronic ↗

Exact wave solver for nonparaxial laser beam propagation

Simulations of inertial confinement fusion (ICF) experiments require high-fidelity models for laser beam propagation in a nonuniform plasma with varying index of refraction. We describe a new numerical wave solver that is applicable to centimeter-scale length plasmas encountered in indirect drive ICF applications. The one-way Helmholtz equation (OHE) generalizes the time-harmonic paraxial wave equation to large angles. Here, we present a methodology to numerically evaluate the exact solution to the OHE. This solution is computed by analytically advancing eigenfunctions of the one-way Helmholtz operator along a propagation direction and is applicable to any given index of a refraction profile. We compare our exact method with a commonly used approximate split-step technique for solving the OHE. As a test problem, we consider nonparaxial propagation of Gaussian and speckled beams in a plasma density channel with internal reflection. We find that the split-step approach incurs significant errors compared to the exact solution computed using the novel algorithm.

Belyaev, Mikhail A. (ORCID:0000000224908887)↗

Classification of dynamical Lie algebras generated by spin interactions on undirected graphs

Dynamical Lie algebras (DLAs) are a versatile tool for various topics that span from the expressibility-trainability of variational quantum algorithms (VQAs), to simulation of many body Hamiltonians. Quantum gates and most of the Hamiltonians of interest consist of local interactions; therefore, the analysis of all possible DLAs generated by 1- and 2-local operators is crucial for quantum simulation and VQAs on current hardware. Previously in [R. Wiersema et al ., npj Quantum Inf. 10 , 110 (2024)], we analyzed the DLAs on linear, circular and all-to-all topologies, and obtained results about their dimensions and algebraic structure. Here, in this work, we extend our analysis into any possible hardware topology and provide a classification of all DLAs generated by Pauli strings on any undirected interaction graph. Our results indicate that the DLAs depend solely on whether the connectivity or interaction graph is bipartite or not. In addition, we find that the non-trivial polynomially scaling DLAs appear only on 1D line or circle topologies, and all other DLAs have dimensions scaling exponentially with the system size. Together with the current VQA literature, our results imply that either the majority of VQAs are non-trainable, or we are yet to understand the role of DLAs on the trainability of VQAs.

Algebraic structures↗

Quantum Machine Learning in High Energy Physics

Machine learning has been used in high energy physics for a long time, primarily at the analysis level with supervised classification. Quantum computing was postulated in the early 1980s as way to perform computations that would not be tractable with a classical computer. With the advent of noisy intermediate-scale quantum computing devices, more quantum algorithms are being developed with the aim at exploiting the capacity of the hardware for machine learning applications. An interesting question is whether there are ways to apply quantum machine learning to High Energy Physics. This paper reviews the first generation of ideas that use quantum machine learning on problems in high energy physics and provide an outlook on future applications.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Paired autoencoders for likelihood-free estimation in inverse problems

Abstract We consider the solution of nonlinear inverse problems where the forward problem is a discretization of a partial differential equation. Such problems are notoriously difficult to solve in practice and require minimizing a combination of a data-fit term and a regularization term. The main computational bottleneck of typical algorithms is the direct estimation of the data misfit. Therefore, likelihood-free approaches have become appealing alternatives. Nonetheless, difficulties in generalization and limitations in accuracy have hindered their broader utility and applicability. In this work, we use a paired autoencoder framework as a likelihood-free estimator (LFE) for inverse problems. We show that the use of such an architecture allows us to construct a solution efficiently and to overcome some known open problems when using LFEs. In particular, our framework can assess the quality of the solution and improve on it if needed. We demonstrate the viability of our approach using examples from full waveform inversion and inverse electromagnetic imaging.

Chung, Matthias (ORCID:0000000178224539)↗

Rapid estimation of earthquake locations using waveform traveltimes

SUMMARY We introduce a new approach for locating earthquakes using arrival times derived from waveforms. The most costly computational step of the algorithm scales as the number of stations in the active seismographic network. In this approach, a variation on existing grid search methods, a series of full waveform simulations are conducted for all receiver locations, with sources positioned successively at each station. The traveltime field over the region of interest is calculated by applying a phase picking algorithm to the numerical wavefields produced from each simulation. An event is located by subtracting the stored traveltime field from the arrival time at each station. This provides a shifted and time-reversed traveltime field for each station. The shifted and time-reversed fields all approach the origin time of the event at the source location. The mean or median value at the source location thus approximates the event origin time. Measures of dispersion about this mean or median time at each grid point, such as the sample standard error and the average deviation, are minimized at the correct source position. Uncertainty in the event position is provided by the contours of standard error defined over the grid. An application of this technique to a synthetic data set indicates that the approach provides stable locations even when the traveltimes are contaminated by additive random noise containing a significant number of outliers and velocity model errors. It is found that the waveform-based method out-performs one based upon the eikonal equation for a velocity model with rapid spatial variations in properties due to layering. A comparison with conventional location algorithms in both a laboratory and field setting demonstrates that the technique performs at least as well as existing techniques.

58 GEOSCIENCES↗

The halo light-cone catalogues of ABACUSSUMMIT

We describe a method for generating halo catalogues on the light-cone using the AbacusSummit suite of N-body simulations. The main application of these catalogues is the construction of realistic mock galaxy catalogues and weak lensing maps on the sky. Our algorithm associates the haloes from a set of coarsely spaced snapshots with their positions at the time of light-cone crossing by matching halo particles to on-the-fly light-cone particles. It then records the halo and particle information into an easily accessible product, which we call the AbacusSummit halo light-cone catalogues. Our recommended use of this product is in the halo mass regime of M halo > 2.1 x 10 11 M ⊙ h -1 for the base resolution simulations, i.e. haloes containing at least 100 particles, where the interpolated halo properties are most reliable. To test the validity of the obtained catalogues, we perform various visual inspections and consistency checks. In particular, we construct galaxy mock catalogues of emission-line galaxies (ELGs) at z ~ 1 by adopting a modified version of the AbacusHOD script, which builds on the standard halo occupation distribution (HOD) method by including various extensions. We find that the multipoles of the autocorrelation function are consistent with the predictions from the full-box snapshot, implicitly validating our algorithm. In addition, we compute and output CMB convergence maps and find that the auto- and cross-power spectrum agrees with the theoretical prediction at the sub-per-cent level.

79 ASTRONOMY AND ASTROPHYSICS↗

The future of computing beyond Moore’s Law

Moore’s Law is a techno-economic model that has enabled the information technology industry to double the performance and functionality of digital electronics roughly every 2 years within a fixed cost, power and area. Advances in silicon lithography have enabled this exponential miniaturization of electronics, but, as transistors reach atomic scale and fabrication costs continue to rise, the classical technological driver that has underpinned Moore’s Law for 50 years is failing and is anticipated to flatten by 2025. Here, this article provides an updated view of what a post-exascale system will look like and the challenges ahead, based on our most recent understanding of technology roadmaps. It also discusses the tapering of historical improvements, and how it affects options available to continue scaling of successors to the first exascale machine. Lastly, this article covers the many different opportunities and strategies available to continue computing performance improvements in the absence of historical technology drivers. This article is part of a discussion meeting issue ‘Numerical algorithms for high-performance computational science’.

97 MATHEMATICS AND COMPUTING↗

Simple algorithm for polarized parton evolution

We present an algorithm to include the correlation between the production and decay planes of gluons in a parton-shower simulation. The technique is based on identifying the charge currents responsible for the creation and annihilation of the vector field. It is applicable in both the hard-collinear and the soft wide-angle region. As a function of the number of particles, the algorithm scales linear in computing time and memory. We demonstrate agreement with fixed-order perturbative calculations in the relevant kinematical limits, and present a new observable that can be used to probe correlations beyond current-current interactions.

Höche, Stefan [Fermi National Accelerator Laborato↗