Analyzing Alltoall Algorithms with SST
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This study presents the development and implementation of an autonomous Bayesian optimization (BO) framework for controlling and optimizing experimental parameters in Atom Probe Tomography (APT). Using commercial silicon needle samples as a benchmark system, we demonstrate that BO can efficiently navigate the complex parameter space of voltage and laser power to achieve target charge state ratios (specifically Si + /(Si + +Si 2+ )) with minimal experimental evaluations. Our implementation integrates Gaussian Process modeling with the CAMECA atom probe control framework, enabling autonomous adjustment of experimental conditions in real-time. Results show that the algorithm successfully converges to target ratios under different scenarios: maintaining a reference ratio, increasing the ratio (favoring Si 1+ ), and decreasing the ratio (favoring Si 2+ ). The system adapts to specimen evolution during analysis, compensating for changes in apex geometry while maintaining optimization targets. This work establishes a proof of concept for AI-driven optimization in APT, addressing the traditional challenges of manual parameter tuning and paving the way for applications to more complex materials where compositional accuracy is critical.
This study supports the mission of the U.S. Department of Energy’s Weatherization Assistance Program (WAP), which aims to increase the energy efficiency of dwellings and reduce their total residential expenditures. Specifically, we examine how projected future climate conditions may affect residential building energy performance by integrating future weather data into the National Energy Audit Tool (NEAT). Since WAP evaluates the cost-effectiveness of retrofit measures over lifespans of up to 30 years, accounting for evolving climate conditions is increasingly important. To reflect future household energy demands, this study replaces historically based Typical Meteorological Year (TMY3) weather inputs with Future Typical Meteorological Year (fTMY) datasets derived from global climate model (GCM) projections. A simulation-based framework was established to enable NEAT analysis under future weather conditions. This workflow involves converting EPW-format weather files into JSON inputs compatible with NEAT and generating degree-hour metrics needed for load calculations. The fTMY dataset used in this study was developed by Oak Ridge National Laboratory through downscaling of six GCMs under different emission scenarios and covers the period from 2020 to 2100. In contrast, the TMY3 dataset is based on historical weather data from 1961 to 1990. Simulations were conducted for benchmark single-family prototype buildings across ASHRAE climate zones 1–7, which cover all regions of the U.S. except the subarctic Zone 8 in northern Alaska, evaluating both heating and cooling loads under TMY3 and fTMY conditions. Four foundation types were tested, while heating systems were standardized, as NEAT does not differentiate thermal energy load by HVAC system type in its load calculations. Results show that fTMY weather input consistently yield lower heating loads and higher cooling loads across most locations, aligning with expected climate warming trends. Notably, colder regions such as zones 6A, 6B, and 7 experience marked reductions in heating load, while warmer and transitional zones, such as 2A (Lufkin, TX) and 3C (San Francisco, CA), have substantial increases in cooling loads. Although this study does not directly assess the performance of retrofit measures under future climate conditions, it provides a critical foundation for doing so. By quantifying shifts in baseline (i.e., pre-retrofit case) energy loads between historical and future weather files, the study highlights the importance of integrating climate-responsive data into audit tools. These findings will inform future efforts to evaluate the long-term effectiveness and cost-effectiveness of weatherization measures under changing climate conditions.
Trip chaining, defined as the sequential linking of trips by individuals throughout a given day, provides critical insights into daily mobility patterns and activity sequencing. Understanding these patterns has significant implications for transportation demand forecasting, congestion management, and local economic activity. This analysis examines trip chaining behaviors in New York State (NYS) for the years 2009 and 2017 and compares the Middle Atlantic Census Division with other U.S. regions in 2022, utilizing data from the National Household Travel Survey (NHTS). Through demographic, geographic, and temporal analysis, this study characterizes how populations organize travel for work, personal errands, and social activities, providing empirical evidence of evolving trip chaining behaviors to inform transportation planning strategies.
This presentation reviews worst case plant disasters and map a cyberattack scenario that would have a similar outcome.
Modeling improvements of neutrino–nucleus scattering are an essential aspect of reducing systematic uncertainties for current and future neutrino oscillation experiments. In particular, retaining quantum mechanical effects such as the interference between one-body (1p1h) and two-body (2p2h) currents in our cross-section models is an essential consideration. This work investigates the impact of this interference term on neutrino–argon scattering using the ACHILLES event generator, which directly implements the interference model developed by Lovato, Rocco, and Steinberg. Using fluxes relevant to SBND, the DUNE near detector, and MiniBooNE, charged- and neutral-current event samples are generated and predicted event rates are plotted against a variety of kinematic variables. For events simulated using the SBND flux, it is found that interference contributes approximately 10 \% to the total charged-current event rate, and serves to enhance the quasi-elastic peak. When considering events generated using the DUNE flux, resonance interactions contribute more to the predicted event rate, as the neutrino flux extends out to higher energies. The relative interference contribution subsequently decreases to roughly 7 \%. Neutral-current simulations show a higher rate of neutron knockout. Finally, a comparison of argon-to-carbon cross-section ratios is performed utilizing fluxes from SBND and MiniBooNE.
Increasing adoption of EVs and expanding unmanaged charging loads could increase the cost of transportation energy due to increasing load variability and shrinking infrastructure capacity. The actual cost of transportation energy, such as charging an EV, depends on several factors including energy costs, charging infrastructure costs, and applicable grid upgrades. Based on studies from past DOE projects; RECHARGE, DirectXFC, FUSE and 21st Century Truck Partnership (21CTP) the EV-CENTS project will develop a transportation energy cost metric to better quantify these factors and provide a framework for assessing the value potential of new technology solutions, such as smart charge management (SCM), which could reduce these costs for all stakeholders. The initial assessment will focus on the cost of charging, which will vary across vehicle classes such as light-duty vehicles (LDV) or medium and heavy-duty vehicles (MHDV), as well as across different vocations resulting in many different use cases for this metric. Cost of charging results will be developed for each use case in both uncontrolled and controlled scenarios to understand the value potential of different SCM objective functions and their ability to optimize the cost of energy and delay or eliminate the need for electrical upgrades.
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Modifications on RNAs play major roles in their stability, translation, and enzymatic activity. Despite its importance, the current techniques are insufficient to study the structure and function of RNA modifications. Indeed, the National Academies of Science, Engineering and Medicine indicate that developing new tools and further study the function of RNA modifications is strategically a high priority for advancing science in the coming years (https://www.nationalacademies.org/our-work/toward-sequencing-and-mapping-of-rna-modifications). RNA modifications occur in all domains of life controlling processes such as RNA turnover, translation regulation, cellular defenses and bioproduction. Our preliminary data indicated that the insulin mRNA might get ADP-ribosylated by the ADP-ribosyltransferase PARP12. RNA ADP-ribosylation has been described in Escherichia coli. Combined to the fact that ADP-ribosyltransferase (PARP) genes are conserved throughout evolution we hypothesize that this modification might play essential roles in cells. Therefore, we proposed to develop sequencing techniques and in vitro enzymatic assays to identify and validate ADP-ribosylation motifs and sites. Here we report the development of RNA-seq and qPCR assays to identify ADP-ribosylated RNAs, in addition to a nicotinamide adenosine dinucleotide (NAD – ADP-ribosylation donor) consumption assay and an enzyme-linked immunosorbent assay (ELISA) to measure ADP-ribosyltransferase activity. Testing these assays with the insulin mRNA confirmed that this transcript is ADP-ribosylated. These assays will not only enable studying the function of ADP-ribosylation but can be easily adapted for studying other RNA modifications. This will open opportunities to study RNA modifications in different model systems from bacteria to viruses to plants, bringing insights into their cellular functions and the possibility of targeting them for biotechnological applications.
CATALYST proposes to perform foundational coordinated research in a team-oriented collaborative effort aimed at advancing a robust understanding of modes of Earth system variability and change using models, observations and process studies. The proposed research will address the DOE/BER mission by exploring the limits to predictability, identifying fundamental underlying mechanisms, quantifying interactions among modes of variability, and discovering tipping points in the Earth system to understand the current and future impacts of these phenomena on regional and global climate. Four fundamental gaps are identified in our knowledge of the Earth system: 1) What are the limits to predictability on various timescales? 2) What are the interactions among modes of Earth system variability? 3) How may modes of Earth system variability change in response to changes in external forcing, and what are the tipping points involved with those changes? 4) How are high impact events connected to modes of Earth system variability and how may they change in the future? Related to those gaps in our knowledge, we formulate four research objectives to address those gaps using a combination of Earth system models (ESMs) and machine learning (ML) methods. Research Objective 1 (RO1) addresses the first gap above and proposes to understand modes of variability and their limits of predictability on subseasonal to decadal timescales using ESMs and ML. Research Objective 2 (RO2) addresses the second gap and proposes to use a hierarchy of models to understand relevant processes and feedbacks related to how modes of variability interact with each other. Research Objective 3 (RO3) is designed to study the third gap and proposes to examine the role of external forcings in changes of modes of Earth system variability and their interactions, and the likelihood and predictability of tipping points and irreversible changes. Research Objective 4 (RO4) will address the fourth gap and proposes to use high resolution ESMs, regionally refined models (RRMs), and ML methods to investigate the relationships between high impact events (e.g. flash droughts and precipitation extremes, atmospheric rivers (ARs), tropical cyclones (TCs), storm surge/sea level rise), the synoptic systems that produce them, and their changes related to modes of Earth system variability. The research will involve the use of the Community Earth System Model (CESM), Energy Exascale Earth System Model (E3SM), CMIP multi-model data sets, a hierarchy of simpler models, and numerous observational data sets. In the course of the proposed research, CATALYST will contribute to metrics and diagnostics that will be integrated in Coordinated Model Evaluation Capabilities (CMEC), particularly with regards to the Quasi-biennial Oscillation (QBO) and its interactions with the Madden-Julian Oscillation (MJO), high atmospheric pressure blocking, and new precipitation metrics.
This presentation illustrates three problems in the analysis of moving object trajectories and demonstrates solutions using the Tracktable software library.
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Explore the source record for details and available documents.