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At least 127 records · Page 7

Data for Kim et al., "Variations in the optical and molecular composition of dissolved organic matter exported from coastal wetlands"

Knowledge about sources and composition of marsh-derived dissolved organic matter (DOM) is critical for understanding the role of marshes in coastal biogeochemical cycling and the fate of marsh-derived DOM in the ocean. To investigate tidal variability in composition of marsh-derived DOM, Kim et al. examined the optical and molecular characteristics of hourly surface water samples at three tidal creeks in the Chesapeake Bay. Groundwater samples along the terrestrial landscape gradient as well as estuarine water from the adjacent estuary at each site were also collected to help resolve sources of surface water DOM. Samples were collected in summer 2024 at three sites – SWH: Sweet Hall Marsh, GCW: Kirkpatrick Marsh, and GWI: Goodwin Islands – which are part of synoptic sites in the Chesapeake Bay region of the COMPASS-FME (Coastal Observations, Mechanisms, and Predictions Across Systems and Scales - Field, Measurements, and Experiments) project. Surface water samples were collected hourly over a 48-hour period at each site. Groundwater and estuarine water samples were collected once. This dataset includes- Surface water depth and salinity- Dissolved organic carbon (DOC) and total dissolved nitrogen (TDN) concentrations- Optical indices and relative composition of parallel factor analysis (PARAFAC) components- High resolution mass spectrometry data.

54 ENVIRONMENTAL SCIENCES↗

Measurement of the low-energy germanium quenching factor with a small-mass detector

We report on work performed to measure the quenching factor of low kinetic energy germanium recoils, as a collaboration between Sandia National Laboratories (SNL) and Duke University. A small-mass low-noise high purity germanium detector was irradiated by a mono-energetic pulsed neutron beam produced by the Triangle Universities Nuclear Laboratory (TUNL) Van-de-Graaff accelerator. Data was collected to determine the germanium quenching factor as a function of 10 discrete recoil energy values in the range ~ [0.8, 5.0] keVnr. We describe the experiment, present the simulation and data processing for the 10 datasets, and discussed the quenching factor analysis result for one of them. This one result seems to indicate a somewhat large deviation from literature values, though it is still preliminary to claim the presence of a systematic bias in our data or analysis.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

A Magnetoencephalographic/Encephalographic (MEG/EEG) Brain-Computer Interface Driver for Interactive iOS Mobile Videogame Applications Utilizing the Hadoop Ecosystem, MongoDB, and Cassandra NoSQL Databases

In Phase I, we collected data on five subjects yielding over 90% positive performance in Magnetoencephalographic (MEG) mid-and post-movement activity. In addition, a driver was developed that substituted the actions of the Brain Computer Interface (BCI) as mouse button presses for real-time use in visual simulations. The process was interfaced to a flight visualization demonstration utilizing left or right brainwave thought movement, the user experiences, the aircraft turning in the chosen direction, or on iOS Mobile Warfighter Videogame application. The BCI’s data analytics of a subject’s MEG brain waves and flight visualization performance videogame analytics were stored and analyzed using the Hadoop Ecosystem as a quick retrieval data warehouse. In Phase II portion of the project involves the Emotiv Encephalographic (EEG) Wireless Brain–Computer interfaces (BCIs) allow for people to establish a novel communication channel between the human brain and a machine, in this case, an iOS Mobile Application(s). The EEG BCI utilizes advanced and novel machine learning algorithms, as well as the Spark Directed Acyclic Graph (DAG), Cassandra NoSQL database environment, and also the competitor NoSQL MongoDB database for housing BCI analytics of subject’s response and users’ intent illustrated for both MEG/EEG brainwave signal acquisition. The wireless EEG signals that were acquired from the OpenVibe and the Emotiv EPOC headset can be connected via Bluetooth to an iPhone utilizing a thin Client architecture. The use of NoSQL databases were chosen because of its schema-less architecture and Map Reduce computational paradigm algorithm for housing a user’s brain signals from each referencing sensor. Thus, in the near future, if multiple users are playing on an online network connection and an MEG/EEG sensor fails, or if the connection is lost from the smartphone and the webserver due to low battery power or failed data transmission, it will not nullify the NoSQL document-oriented (MongoDB) or column-oriented Cassandra databases. Additionally, NoSQL databases have fast querying and indexing methodologies, which are perfect for online game analytics and technology. In Phase II, we collected data on five MEG subjects, yielding over 90% positive performance on iOS Mobile Applications with Objective-C and C++, however on EEG signals utilized on three subjects with the Emotiv wireless headsets and (n < 10) subjects from the OpenVibe EEG database the Variational Bayesian Factor Analysis Algorithm (VBFA) yielded below 60% performance and we are currently pursuing extending the VBFA algorithm to work in the time-frequency domain referred to as VBFA-TF to enhance EEG performance in the near future. The novel usage of NoSQL databases, Cassandra and MongoDB, were the primary main enhancements of the BCI Phase II MEG/EEG brain signal data acquisition, queries, and rapid analytics, with MapReduce and Spark DAG demonstrating future implications for next generation biometric MEG/EEG NoSQL databases.

McClay, Wilbert↗

Eu(III) and Cm(III) Complexation by the Aminocarboxylates NTA, EDTA, and EGTA Studied with NMR, TRLFS, and ITC—An Improved Approach to More Robust Thermodynamics

The complex formation of Eu(III) and Cm(III) was studied via tetradentate, hexadentate, and octadentate coordinating ligands of the aminopolycarboxylate family, viz., nitrilotriacetate (NTA 3- ), ethylenediaminetetraacetate (EDTA 4- ), and ethylene glycol-bis(2-aminoethyl ether)-N,N,N',N'-tetraacetate (EGTA 4- ), respectively. Based on the complexones’ pK a values obtained from 1 H nuclear magnetic resonance (NMR) spectroscopic pH titration, complex formation constants were determined by means of the parallel-factor-analysis-assisted evaluation of Eu(III) and Cm(III) time-resolved laser-induced fluorescence spectroscopy (TRLFS). This was complemented by isothermal titration calorimetry (ITC), providing the enthalpy and entropy of the complex formation. This allowed us to obtain genuine species along with their molecular structures and corresponding reliable thermodynamic data. The three investigated complexones formed 1:1 complexes with both Eu(III) and Cm(III). Besides the established Eu(III)–NTA 1:1 and 1:2 complexes, we observed, for the first time, the existence of a Eu(III)–NTA 2:2 complex of millimolar metal and ligand concentrations. Demonstrated for thermodynamic studies on Eu(III) and Cm(III) interaction with complexones, the utilized approach is commonly applicable to many other metal–ligand systems, even to high-affinity ligands.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

SNEMO: Improved Empirical Models for Type Ia Supernovae

Type Ia supernova cosmology depends on the ability to fit and standardize observations of supernova magnitudes with an empirical model. We present here a series of new models of SN Ia spectral time series that capture a greater amount of supernova diversity than is possible with the models that are currently customary. These are entitled SuperNova Empirical MOdels (SNEMO; https://snfactory.lbl.gov/snemo). The models are constructed using spectrophotometric time series from 172 individual supernovae from the Nearby Supernova Factory, comprising more than 2000 spectra. Using the available observations, Gaussian processes are used to predict a full spectral time series for each supernova. A matrix is constructed from the spectral time series of all the supernovae, and Expectation Maximization Factor Analysis is used to calculate the principal components of the data. K-fold cross-validation then determines the selection of model parameters and accounts for color variation in the data. Based on this process, the final models are trained on supernovae that have been dereddened using the Fitzpatrick and Massa extinction relation. Three final models are presented here: SNEMO2, a two-component model for comparison with current Type Ia models; SNEMO7, a seven-component model chosen for standardizing supernova magnitudes, which results in a total dispersion of 0.100 mag for a validation set of supernovae, of which 0.087 mag is unexplained (a total dispersion of 0.113 mag with an unexplained dispersion of 0.097 mag is found for the total set of training and validation supernovae); and SNEMO15, a comprehensive 15-component model that maximizes the amount of spectral time-series behavior captured.

79 ASTRONOMY AND ASTROPHYSICS↗

Measurement report: Molecular composition, optical properties, and radiative effects of water-soluble organic carbon in snowpack samples from northern Xinjiang, China

Abstract. Water-soluble organic carbon (WSOC) in the cryosphere has an important impact on the biogeochemistry cycling and snow–ice surface energy balance through changes in the surface albedo. This work reports on the chemical characterization of WSOC in 28 representative snowpack samples collected across a regional area of northern Xinjiang, northwestern China. We employed multimodal analytical chemistry techniques to investigate both bulk and molecular-level composition of WSOC and its optical properties, informing the follow-up radiative forcing (RF) modeling estimates. Based on the geographic differences and proximity of emission sources, the snowpack collection sites were grouped as urban/industrial (U), rural/remote (R), and soil-influenced (S) sites, for which average WSOC total mass loadings were measured as 1968 ± 953 ng g−1 (U), 885 ± 328 ng g−1 (R), and 2082 ± 1438 ng g−1 (S), respectively. The S sites showed the higher mass absorption coefficients at 365 nm (MAC365) of 0.94 ± 0.31 m2 g−1 compared to those of U and R sites (0.39 ± 0.11 m2 g−1 and 0.38 ± 0.12 m2 g−1, respectively). Bulk composition of WSOC in the snowpack samples and its basic source apportionment was inferred from the excitation–emission matrices and the parallel factor analysis featuring relative contributions of one protein-like (PRLIS) and two humic-like (HULIS-1 and HULIS-2) components with ratios specific to each of the S, U, and R sites. Additionally, a sample from site 120 showed unique pollutant concentrations and spectroscopic features remarkably different from all other U, R, and S samples. Molecular-level characterization of WSOC using high-resolution mass spectrometry (HRMS) provided further insights into chemical differences among four types of samples (U, R, S, and 120). Specifically, many reduced-sulfur-containing species with high degrees of unsaturation and aromaticity were uniquely identified in U samples, suggesting an anthropogenic source. Aliphatic/protein-like species showed the highest contribution in R samples, indicating their biogenic origin. The WSOC components from S samples showed high oxygenation and saturation levels. A few unique CHON and CHONS compounds with high unsaturation degree and molecular weight were detected in the 120 sample, which might be anthraquinone derivatives from plant debris. Modeling of the WSOC-induced RF values showed warming effects of 0.04 to 0.59 W m−2 among different groups of sites, which contribute up to 16 % of that caused by black carbon (BC), demonstrating the important influences of WSOC on the snow energy budget.

54 ENVIRONMENTAL SCIENCES↗

Emerging low-cloud feedback and adjustment in global satellite observations

From mid-2003 to mid-2024, a global decrease in low-cloud amount enhanced the absorption of solar radiation by 0.22±0.07 W m −2 per decade (±1σ range), accelerating the energy imbalance trend during that period (0.44 W m −2 per decade). Through controlling factor analysis, here we show that the low-cloud trend is due to a combination of cloud feedback and adjustments to greenhouse gases and aerosols (respectively 0.09±0.02, 0.05±0.03, and 0.03±0.03 W m −2 per decade), which jointly account for 74 % of the trend. The contribution of natural climate variability is weak but uncertain (0.01±0.08 W m −2 per decade), owing to a poorly constrained trend in boundary-layer inversion strength. Importantly, the observed low-cloud radiative trend lies well within the range of values simulated by contemporary global climate models under conditions close to present day. Any systematic model error in the representation of present-day global energy imbalance trends is thus likely to originate in processes unrelated to low clouds.

Geosciences↗

Effects of gas–wall partitioning in Teflon tubing and instrumentation on time-resolved measurements of gas-phase organic compounds

Recent studies have demonstrated that organic compounds can partition from the gas phase to the walls in Teflon environmental chambers and that the process can be modeled as absorptive partitioning. Here these studies were extended to investigate gas–wall partitioning of organic compounds in Teflon tubing and inside a proton-transfer-reaction mass spectrometer (PTR-MS) used to monitor compound concentrations. Rapid partitioning of C 8 –C 14 2-ketones and C 11 –C 16 1-alkenes was observed for compounds with saturation concentrations ( c * ) in the range of 3 × 10 4 to 1 × 10 7 µg m -3 , causing delays in instrument response to step-function changes in the concentration of compounds being measured. These delays vary proportionally with tubing length and diameter and inversely with flow rate and c * . The gas–wall partitioning process that occurs in tubing is similar to what occurs in a gas chromatography column, and the measured delay times (analogous to retention times) were accurately described using a linear chromatography model where the walls were treated as an equivalent absorbing mass that is consistent with values determined for Teflon environmental chambers. The effect of PTR-MS surfaces on delay times was also quantified and incorporated into the model. The model predicts delays of an hour or more for semivolatile compounds measured under commonly employed conditions. These results and the model can enable better quantitative design of sampling systems, in particular when fast response is needed, such as for rapid transients, aircraft, or eddy covariance measurements. They may also allow estimation of c * values for unidentified organic compounds detected by mass spectrometry and could be employed to introduce differences in time series of compounds for use with factor analysis methods. Best practices are suggested for sampling organic compounds through Teflon tubing.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Sea ice breakup and freeze-up indicators for users of the Arctic coastal environment

Abstract. The timing of sea ice retreat and advance in Arctic coastal waters varies substantially from year to year. Various activities, ranging from marine transport to the use of sea ice as a platform for industrial activity or winter travel, are affected by variations in the timing of breakup and freeze-up, resulting in a need for indicators to document the regional and temporal variations in coastal areas. The primary objective of this study is to use locally based metrics to construct indicators of breakup and freeze-up in the Arctic and subarctic coastal environment. The indicators developed here are based on daily sea ice concentrations derived from satellite passive-microwave measurements. The “day of year” indicators are designed to optimize value for users while building on past studies characterizing breakup and freeze-up dates in the open pack ice. Relative to indicators for broader adjacent seas, the coastal indicators generally show later breakup at sites known to have landfast ice. The coastal indicators also show earlier freeze-up at some sites in comparison with freeze-up for broader offshore regions, likely tied to earlier freezing of shallow-water regions and areas affected by freshwater input from nearby streams and rivers. A factor analysis performed to synthesize the local indicator variations shows that the local breakup and freeze-up indicators have greater spatial variability than corresponding metrics based on regional ice coverage. However, the trends towards earlier breakup and later freeze-up are unmistakable over the post-1979 period in the synthesized metrics of coastal breakup and freeze-up and the corresponding regional ice coverage. The findings imply that locally defined indicators can serve as key links between pan-Arctic or global indicators such as sea ice extent or volume and local uses of sea ice, with the potential to inform community-scale adaptation and response.

54 ENVIRONMENTAL SCIENCES↗

Conditioning Analysis of Incomplete Cholesky Factorizations with Orthogonal Dropping

The analysis of preconditioners based on incomplete Cholesky factorization in which the neglected (dropped) components are orthogonal to the approximations being kept is presented. General estimate for the condition number of the preconditioned system is given which only depends on the accuracy of individual approximations. The estimate is further improved if, for instance, only the newly computed rows of the factor are modified during each approximation step. In this latter case it is further shown to be sharp. The analysis is illustrated with some existing factorizations in the context of discretized elliptic partial differential equations.

97 MATHEMATICS AND COMPUTING↗

Final Technical Report: Advanced Measurement and Analysis of PV Derate Factors.

The Advanced Measurement and Analysis of PV Derate Factors project focuses on improving the accuracy and reducing the uncertainty of PV performance model predictions by addressing a common element of all PV performance models referred to as “derates”. Widespread use of “rules of thumb”, combined with significant uncertainty regarding appropriate values for these factors contribute to uncertainty in projected energy production.

14 SOLAR ENERGY↗

Electronic health record analysis via deep poisson factor models

Electronic Health Record (EHR) phenotyping utilizes patient data captured through normal medical practice, to identify features that may represent computational medical phenotypes. These features may be used to identify at-risk patients and improve prediction of patient morbidity and mortality. We present a novel deep multi-modality architecture for EHR analysis (applicable to joint analysis of multiple forms of EHR data), based on Poisson Factor Analysis (PFA) modules. Each modality, composed of observed counts, is represented as a Poisson distribution, parameterized in terms of hidden binary units. In-formation from different modalities is shared via a deep hierarchy of common hidden units. Activation of these binary units occurs with probability characterized as Bernoulli-Poisson link functions, instead of more traditional logistic link functions. In addition, we demon-strate that PFA modules can be adapted to discriminative modalities. To compute model parameters, we derive efficient Markov Chain Monte Carlo (MCMC) inference that scales efficiently, with significant computational gains when compared to related models based on logistic link functions. To explore the utility of these models, we apply them to a subset of patients from the Duke-Durham patient cohort. We identified a cohort of over 12,000 patients with Type 2 Diabetes Mellitus (T2DM) based on diagnosis codes and laboratory tests out of our patient population of over 240,000. Examining the common hidden units uniting the PFA modules, we identify patient features that represent medical concepts. Experiments indicate that our learned features are better able to predict mortality and morbidity than clinical features identified previously in a large-scale clinical trial.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

Uncertainties in greenhouse gas emission factors: A comprehensive analysis of switchgrass‐based biofuel production

Abstract This study investigates uncertainties in greenhouse gas (GHG) emission factors related to switchgrass‐based biofuel production in Michigan. Using three life cycle assessment (LCA) databases—US lifecycle inventory (USLCI) database, GREET, and Ecoinvent—each with multiple versions, we recalculated the global warming intensity (GWI) and GHG mitigation potential in a static calculation. Employing Monte Carlo simulations along with local and global sensitivity analyses, we assess uncertainties and pinpoint key parameters influencing GWI. The convergence of results across our previous study, static calculations, and Monte Carlo simulations enhances the credibility of estimated GWI values. Static calculations, validated by Monte Carlo simulations, offer reasonable central tendencies, providing a robust foundation for policy considerations. However, the wider range observed in Monte Carlo simulations underscores the importance of potential variations and uncertainties in real‐world applications. Sensitivity analyses identify biofuel yield, GHG emissions of electricity, and soil organic carbon (SOC) change as pivotal parameters influencing GWI. Decreasing uncertainties in GWI may be achieved by making greater efforts to acquire more precise data on these parameters. Our study emphasizes the significance of considering diverse GHG factors and databases in GWI assessments and stresses the need for accurate electricity fuel mixes, crucial information for refining GWI assessments and informing strategies for sustainable biofuel production.

Kim, Seungdo↗

Theoretical analysis of key factors achieving reversed magnetic shear q -profiles sustained with lower hybrid waves on EAST

The phase space analysis technique is applied to provide new insights into the fully non-inductive lower hybrid current driven (LHCD) discharges on EAST. The analysis shows that there are bounded and unbounded topologies of lower hybrid (LH) waves in phase space. For typical parameters on EAST, the propagation domain for 4.6 GHz LH waves is bounded, while unbounded for 2.45 GHz LH waves and one of the conditions is recognized to be good for achieving an off-axis current profile driven by 4.6 GHz LH waves on EAST. The parametric analysis on the potential power deposition (PPD) region for those experiments demonstrates that the reversed magnetic shear dominates the wave behavior, and confines the LH power absorption to the far off-axis region as long as it occurs in the 4.6 GHz dominated LHCD discharge. GENRAY/CQL3D simulations also confirm this effect of reversed shear on the power absorption of 4.6 GHz waves. A bounded propagation domain and a positive feedback loop between magnetic shear reversal and off-axis LHCD profile could explain the LH-only-sustained strong reversed magnetic shear observed in experiments on multiple machines. In contrast, there is no such effect for 2.45 GHz waves on EAST since the PPD region is less sensitive to the change of reversed shear due to the unbounded propagation domain.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Theoretical analysis of key factors achieving reversed magnetic shear q-profiles sustained with lower hybrid waves on EAST

The phase space analysis technique is applied to provide new insights into the fully non-inductive lower hybrid current driven (LHCD) discharges on EAST (Garofalo et al 2017 Nucl. Fusion 57 076037). The analysis shows that there are bounded and unbounded topologies of lower hybrid (LH) waves in phase space. For typical parameters on EAST, the propagation domain for 4.6 GHz LH waves is bounded, while unbounded for 2.45 GHz LH waves and one of the conditions is recognized to be good for achieving an off-axis current profile driven by 4.6 GHz LH waves on EAST. The parametric analysis on the potential power deposition (PPD) region for those experiments demonstrates that the reversed magnetic shear dominates the wave behavior, and confines the LH power absorption to the far off-axis region as long as it occurs in the 4.6 GHz dominated LHCD discharge. GENRAY/CQL3D simulations also confirm this effect of reversed shear on the power absorption of 4.6 GHz waves. A bounded propagation domain and a positive feedback loop between magnetic shear reversal and off-axis LHCD profile could explain the LH-only-sustained strong reversed magnetic shear observed in experiments on multiple machines. In contrast, there is no such effect for 2.45 GHz waves on EAST since the PPD region is less sensitive to the change of reversed shear due to the unbounded propagation domain.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗